RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
USP8-210ENST00000560379 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
USP8-210ENST00000560379 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
USP8-210ENST00000560379 PTPREP23469 700 aa11.29□□□□□ -0.6
USP8-210ENST00000560379 PTPN5P54829 565 aa11.28□□□□□ -0.6
USP8-210ENST00000560379 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
USP8-210ENST00000560379 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
USP8-210ENST00000560379 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
USP8-210ENST00000560379 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
USP8-210ENST00000560379 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
USP8-210ENST00000560379 ABCC9O60706 1549 aa11.23□□□□□ -0.61
USP8-210ENST00000560379 COL9A1P20849 921 aa11.21□□□□□ -0.61
USP8-210ENST00000560379 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
USP8-210ENST00000560379 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
USP8-210ENST00000560379 WNT2BQ93097 391 aa11.2□□□□□ -0.62
USP8-210ENST00000560379 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
USP8-210ENST00000560379 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
USP8-210ENST00000560379 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
USP8-210ENST00000560379 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
USP8-210ENST00000560379 ARXQ96QS3 562 aa11.14□□□□□ -0.63
USP8-210ENST00000560379 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
USP8-210ENST00000560379 GOLGA8CPA6NN73 597 aa11.12□□□□□ -0.63
USP8-210ENST00000560379 PHF14O94880 888 aa11.12□□□□□ -0.63
USP8-210ENST00000560379 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
USP8-210ENST00000560379 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
USP8-210ENST00000560379 A0A0G2JS52 829 aa11.11□□□□□ -0.63
USP8-210ENST00000560379 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
USP8-210ENST00000560379 DPYSL4O14531 572 aa11.09□□□□□ -0.63
USP8-210ENST00000560379 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
USP8-210ENST00000560379 BCAMP50895 628 aa11.08□□□□□ -0.64
USP8-210ENST00000560379 KIAA1468Q9P260 1216 aa11.06□□□□□ -0.64
USP8-210ENST00000560379 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
USP8-210ENST00000560379 ANKK1Q8NFD2 765 aa11.04□□□□□ -0.64
USP8-210ENST00000560379 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
USP8-210ENST00000560379 RGS20O76081 388 aa11.03□□□□□ -0.64
USP8-210ENST00000560379 ITGBL1O95965 494 aaPredicted RBP11.03□□□□□ -0.64
USP8-210ENST00000560379 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
USP8-210ENST00000560379 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
USP8-210ENST00000560379 LAPTM4BQ86VI4 370 aa11.02□□□□□ -0.65
USP8-210ENST00000560379 ZFRQ96KR1 1074 aaKnown RBP11.02□□□□□ -0.65
USP8-210ENST00000560379 EPAS1Q99814 870 aa11.02□□□□□ -0.65
USP8-210ENST00000560379 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
USP8-210ENST00000560379 DDX12PQ92771 950 aa11□□□□□ -0.65
USP8-210ENST00000560379 RBM33Q96EV2 1170 aaKnown RBP11□□□□□ -0.65
USP8-210ENST00000560379 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
USP8-210ENST00000560379 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
USP8-210ENST00000560379 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
USP8-210ENST00000560379 ZCCHC6Q5VYS8 1495 aaKnown RBP10.98□□□□□ -0.65
USP8-210ENST00000560379 NACADO15069 1562 aa10.98□□□□□ -0.65
USP8-210ENST00000560379 RB1CC1Q8TDY2 1594 aa10.96□□□□□ -0.65
USP8-210ENST00000560379 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
USP8-210ENST00000560379 PRIM1P49642 420 aaKnown RBP10.95□□□□□ -0.66
USP8-210ENST00000560379 PDIA6Q15084 440 aa10.95□□□□□ -0.66
USP8-210ENST00000560379 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
USP8-210ENST00000560379 DCAF1Q9Y4B6 1507 aa10.94□□□□□ -0.66
USP8-210ENST00000560379 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
USP8-210ENST00000560379 IRX2Q9BZI1 471 aaPredicted RBP10.94□□□□□ -0.66
USP8-210ENST00000560379 FAM98CQ17RN3 349 aaKnown RBP10.93□□□□□ -0.66
USP8-210ENST00000560379 FAM198AQ9UFP1 575 aa10.92□□□□□ -0.66
USP8-210ENST00000560379 C3orf80F5H4A9 247 aa10.91□□□□□ -0.66
USP8-210ENST00000560379 C14orf37Q86TY3 774 aa10.91□□□□□ -0.66
USP8-210ENST00000560379 NYAP1Q6ZVC0 841 aa10.9□□□□□ -0.66
USP8-210ENST00000560379 HOMEZQ8IX15 550 aa10.9□□□□□ -0.66
USP8-210ENST00000560379 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
USP8-210ENST00000560379 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
USP8-210ENST00000560379 MAP3K7O43318 606 aa10.87□□□□□ -0.67
USP8-210ENST00000560379 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
USP8-210ENST00000560379 LRCH3Q96II8 777 aa10.86□□□□□ -0.67
USP8-210ENST00000560379 SMAPO00193 183 aa10.85□□□□□ -0.67
USP8-210ENST00000560379 KCNC4Q03721 635 aa10.85□□□□□ -0.67
USP8-210ENST00000560379 SPDYE16A6NNV3 312 aaPredicted RBP10.83□□□□□ -0.68
USP8-210ENST00000560379 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
USP8-210ENST00000560379 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
USP8-210ENST00000560379 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
USP8-210ENST00000560379 PRSS12P56730 875 aa10.81□□□□□ -0.68
USP8-210ENST00000560379 PACS2Q86VP3 889 aa10.81□□□□□ -0.68
USP8-210ENST00000560379 SAMD7Q7Z3H4 446 aa10.8□□□□□ -0.68
USP8-210ENST00000560379 E2F4Q16254 413 aa10.79□□□□□ -0.68
USP8-210ENST00000560379 TJAP1Q5JTD0 557 aa10.79□□□□□ -0.68
USP8-210ENST00000560379 LCE2BO14633 110 aa10.78□□□□□ -0.68
USP8-210ENST00000560379 OSBPP22059 807 aa10.78□□□□□ -0.68
USP8-210ENST00000560379 GRXCR2A6NFK2 248 aa10.77□□□□□ -0.69
USP8-210ENST00000560379 P3H3Q8IVL6 736 aa10.76□□□□□ -0.69
USP8-210ENST00000560379 PPP4CP60510 307 aa10.75□□□□□ -0.69
USP8-210ENST00000560379 TATDN2Q93075 761 aa10.75□□□□□ -0.69
USP8-210ENST00000560379 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
USP8-210ENST00000560379 UNC13AQ9UPW8 1703 aa10.72□□□□□ -0.69
USP8-210ENST00000560379 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
USP8-210ENST00000560379 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
USP8-210ENST00000560379 MTRQ99707 1265 aa10.72□□□□□ -0.69
USP8-210ENST00000560379 NBPF26B4DH59 902 aa10.71□□□□□ -0.69
USP8-210ENST00000560379 Q6ZNB5 142 aa10.71□□□□□ -0.69
USP8-210ENST00000560379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP8-210ENST00000560379 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
USP8-210ENST00000560379 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
USP8-210ENST00000560379 NUDT18Q6ZVK8 323 aa10.7□□□□□ -0.7
USP8-210ENST00000560379 ZNF516Q92618 1163 aa10.7□□□□□ -0.7
USP8-210ENST00000560379 APLP1P51693 650 aa10.69□□□□□ -0.7
USP8-210ENST00000560379 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
USP8-210ENST00000560379 BRPF1P55201 1214 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms