RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	AMPH	P49418	695 aa		11.87	□□□□□ -0.51
NEO1-208	ENST00000560328	FGD1	P98174	961 aa		11.86	□□□□□ -0.51
NEO1-208	ENST00000560328	RBM19	Q9Y4C8	960 aa	Known RBP	11.86	□□□□□ -0.51
NEO1-208	ENST00000560328	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.86	□□□□□ -0.51
NEO1-208	ENST00000560328	TRIM44	Q96DX7	344 aa	Predicted RBP	11.86	□□□□□ -0.51
NEO1-208	ENST00000560328	RRP7A	Q9Y3A4	280 aa	Known RBP	11.85	□□□□□ -0.51
NEO1-208	ENST00000560328	CGNL1	Q0VF96	1302 aa		11.85	□□□□□ -0.51
NEO1-208	ENST00000560328	STK31	Q9BXU1	1019 aa		11.85	□□□□□ -0.51
NEO1-208	ENST00000560328	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.85	□□□□□ -0.51
NEO1-208	ENST00000560328	AFAP1	Q8N556	730 aa		11.85	□□□□□ -0.51
NEO1-208	ENST00000560328	CLUAP1	Q96AJ1	413 aa		11.85	□□□□□ -0.51
NEO1-208	ENST00000560328	SYNJ2	O15056	1496 aa		11.84	□□□□□ -0.51
NEO1-208	ENST00000560328	HSCB	Q8IWL3	235 aa		11.84	□□□□□ -0.51
NEO1-208	ENST00000560328	LTV1	Q96GA3	475 aa	Predicted RBP	11.84	□□□□□ -0.51
NEO1-208	ENST00000560328	EFCAB5	A4FU69	1503 aa		11.84	□□□□□ -0.51
NEO1-208	ENST00000560328	RRBP1	Q9P2E9	1410 aa	Known RBP	11.84	□□□□□ -0.51
NEO1-208	ENST00000560328	LMOD3	Q0VAK6	560 aa		11.83	□□□□□ -0.52
NEO1-208	ENST00000560328	ZRSR1	Q15695	479 aa	Known RBP	11.83	□□□□□ -0.52
NEO1-208	ENST00000560328	ARHGAP5	Q13017	1502 aa		11.83	□□□□□ -0.52
NEO1-208	ENST00000560328	TAOK2	Q9UL54	1235 aa		11.83	□□□□□ -0.52
NEO1-208	ENST00000560328	PMFBP1	Q8TBY8	1022 aa		11.83	□□□□□ -0.52
NEO1-208	ENST00000560328	TCERG1	O14776	1098 aa	Known RBP	11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	COG3	Q96JB2	828 aa		11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	CHMP4A	Q9BY43	222 aa		11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	MCC	P23508	829 aa		11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	CFAP44	Q96MT7	982 aa		11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	BICRA	Q9NZM4	1560 aa		11.82	□□□□□ -0.52
NEO1-208	ENST00000560328	DNMBP	Q6XZF7	1577 aa		11.81	□□□□□ -0.52
NEO1-208	ENST00000560328	SNAPC4	Q5SXM2	1469 aa		11.81	□□□□□ -0.52
NEO1-208	ENST00000560328	SPRYD3	Q8NCJ5	442 aa		11.81	□□□□□ -0.52
NEO1-208	ENST00000560328	STAC3	Q96MF2	364 aa		11.81	□□□□□ -0.52
NEO1-208	ENST00000560328	KIF7	Q2M1P5	1343 aa		11.8	□□□□□ -0.52
NEO1-208	ENST00000560328	CCDC7	Q96M83	1385 aa		11.8	□□□□□ -0.52
NEO1-208	ENST00000560328	SLC4A10	Q6U841	1118 aa		11.79	□□□□□ -0.52
NEO1-208	ENST00000560328	ZBED9	Q6R2W3	1325 aa		11.78	□□□□□ -0.52
NEO1-208	ENST00000560328	PTMA	P06454	111 aa	Known RBP	11.78	□□□□□ -0.52
NEO1-208	ENST00000560328	EHBP1L1	Q8N3D4	1523 aa		11.78	□□□□□ -0.52
NEO1-208	ENST00000560328	APAF1	O14727	1248 aa		11.77	□□□□□ -0.53
NEO1-208	ENST00000560328	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
NEO1-208	ENST00000560328		E9PSI1	815 aa		11.77	□□□□□ -0.53
NEO1-208	ENST00000560328	KIAA1211	Q6ZU35	1233 aa		11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	ELL2	O00472	640 aa	Predicted RBP	11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	TRO	Q12816	1431 aa	Predicted RBP	11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	MIA2	Q96PC5	1412 aa		11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	PLIN1	O60240	522 aa		11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	BCL2L13	Q9BXK5	485 aa		11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	HMMR	O75330	724 aa		11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	CCDC9	Q9Y3X0	531 aa	Known RBP	11.76	□□□□□ -0.53
NEO1-208	ENST00000560328	CDK11B	P21127	795 aa	Known RBP	11.75	□□□□□ -0.53
NEO1-208	ENST00000560328	TMEM132E	Q6IEE7	984 aa		11.75	□□□□□ -0.53
NEO1-208	ENST00000560328	TIAM1	Q13009	1591 aa		11.75	□□□□□ -0.53
NEO1-208	ENST00000560328	C9orf84	Q5VXU9	1444 aa		11.75	□□□□□ -0.53
NEO1-208	ENST00000560328	ABCA10	Q8WWZ4	1543 aa		11.74	□□□□□ -0.53
NEO1-208	ENST00000560328	DIAPH1	O60610	1272 aa	Known RBP	11.74	□□□□□ -0.53
NEO1-208	ENST00000560328	DNAJC5B	Q9UF47	199 aa		11.74	□□□□□ -0.53
NEO1-208	ENST00000560328	HECW1	Q76N89	1606 aa		11.74	□□□□□ -0.53
NEO1-208	ENST00000560328	WASHC2A	Q641Q2	1341 aa		11.74	□□□□□ -0.53
NEO1-208	ENST00000560328	HDAC5	Q9UQL6	1122 aa		11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	PLCB2	Q00722	1185 aa		11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	RRP1	P56182	461 aa	Known RBP	11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	MFAP1	P55081	439 aa	Known RBP	11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	TSHZ2	Q9NRE2	1034 aa		11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	CNTLN	Q9NXG0	1405 aa		11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	CFAP70	Q5T0N1	1121 aa		11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	CHMP3	Q9Y3E7	222 aa		11.73	□□□□□ -0.53
NEO1-208	ENST00000560328	GOLGA6L4	A6NEF3	574 aa		11.72	□□□□□ -0.53
NEO1-208	ENST00000560328	KIAA0586	Q9BVV6	1533 aa		11.72	□□□□□ -0.53
NEO1-208	ENST00000560328	EXOC6	Q8TAG9	804 aa		11.72	□□□□□ -0.53
NEO1-208	ENST00000560328	CABP2	Q9NPB3	220 aa		11.71	□□□□□ -0.53
NEO1-208	ENST00000560328	HFM1	A2PYH4	1435 aa		11.71	□□□□□ -0.53
NEO1-208	ENST00000560328	ZKSCAN2	Q63HK3	967 aa		11.71	□□□□□ -0.53
NEO1-208	ENST00000560328	LAMC3	Q9Y6N6	1575 aa		11.71	□□□□□ -0.53
NEO1-208	ENST00000560328	TRIM6-TRIM34	B2RNG4	842 aa		11.71	□□□□□ -0.54
NEO1-208	ENST00000560328	PLEKHH2	Q8IVE3	1493 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	KIAA1107	Q9UPP5	1409 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	CRBN	Q96SW2	442 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	SCAPER	Q9BY12	1400 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	RIPK4	P57078	832 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	NBPF1	Q3BBV0	1214 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	C1orf141	Q5JVX7	400 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	PSME1	Q06323	249 aa		11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	SLK	Q9H2G2	1235 aa	Predicted RBP	11.7	□□□□□ -0.54
NEO1-208	ENST00000560328	DAPK1	P53355	1430 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	GORAB	Q5T7V8	394 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	GPATCH3	Q96I76	525 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	GGNBP2	Q9H3C7	697 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	COG6	Q9Y2V7	657 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	CDK13	Q14004	1512 aa	Known RBP	11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	EPRS	P07814	1512 aa	Known RBP	11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	TAF7L	Q5H9L4	462 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	NGEF	Q8N5V2	710 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	RUNDC1	Q96C34	613 aa		11.69	□□□□□ -0.54
NEO1-208	ENST00000560328	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.68	□□□□□ -0.54
NEO1-208	ENST00000560328	NBPF8	Q3BBV2	869 aa		11.68	□□□□□ -0.54
NEO1-208	ENST00000560328	TEF	Q10587	303 aa		11.68	□□□□□ -0.54
NEO1-208	ENST00000560328	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.67	□□□□□ -0.54
NEO1-208	ENST00000560328	IQGAP2	Q13576	1575 aa		11.67	□□□□□ -0.54

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