RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-212ENST00000560179 BARGINQ6ZT62 677 aa16.36■□□□□ 0.21
ETFA-212ENST00000560179 PTGDRQ13258 359 aa16.35■□□□□ 0.21
ETFA-212ENST00000560179 NPDC1Q9NQX5 325 aaPredicted RBP16.35■□□□□ 0.21
ETFA-212ENST00000560179 LCE2DQ5TA82 110 aaPredicted RBP16.34■□□□□ 0.21
ETFA-212ENST00000560179 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
ETFA-212ENST00000560179 VARS2Q5ST30 1063 aaKnown RBP16.32■□□□□ 0.2
ETFA-212ENST00000560179 HIC1Q14526 733 aa16.31■□□□□ 0.2
ETFA-212ENST00000560179 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
ETFA-212ENST00000560179 GNPATO15228 680 aa16.29■□□□□ 0.2
ETFA-212ENST00000560179 PTPREP23469 700 aa16.27■□□□□ 0.2
ETFA-212ENST00000560179 KRI1Q8N9T8 703 aaKnown RBP16.26■□□□□ 0.19
ETFA-212ENST00000560179 CERKQ8TCT0 537 aa16.26■□□□□ 0.19
ETFA-212ENST00000560179 SLC24A3Q9HC58 644 aa16.26■□□□□ 0.19
ETFA-212ENST00000560179 FECHP22830 423 aa16.25■□□□□ 0.19
ETFA-212ENST00000560179 COL9A1P20849 921 aa16.23■□□□□ 0.19
ETFA-212ENST00000560179 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
ETFA-212ENST00000560179 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
ETFA-212ENST00000560179 HS3ST6Q96QI5 342 aa16.21■□□□□ 0.19
ETFA-212ENST00000560179 ZNF687Q8N1G0 1237 aa16.2■□□□□ 0.18
ETFA-212ENST00000560179 KCNK17Q96T54 332 aa16.2■□□□□ 0.18
ETFA-212ENST00000560179 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
ETFA-212ENST00000560179 PPP1R3GB7ZBB8 358 aa16.19■□□□□ 0.18
ETFA-212ENST00000560179 MAP2K5Q13163 448 aa16.19■□□□□ 0.18
ETFA-212ENST00000560179 POTEEQ6S8J3 1075 aa16.18■□□□□ 0.18
ETFA-212ENST00000560179 ARHGAP33O14559 1287 aa16.16■□□□□ 0.18
ETFA-212ENST00000560179 IRF6O14896 467 aa16.16■□□□□ 0.18
ETFA-212ENST00000560179 PSEN2P49810 448 aa16.16■□□□□ 0.18
ETFA-212ENST00000560179 PRSS12P56730 875 aa16.16■□□□□ 0.18
ETFA-212ENST00000560179 KCNH8Q96L42 1107 aa16.16■□□□□ 0.18
ETFA-212ENST00000560179 AK7Q96M32 723 aa16.16■□□□□ 0.18
ETFA-212ENST00000560179 PADI6Q6TGC4 694 aa16.15■□□□□ 0.18
ETFA-212ENST00000560179 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
ETFA-212ENST00000560179 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
ETFA-212ENST00000560179 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
ETFA-212ENST00000560179 TTC13Q8NBP0 860 aa16.13■□□□□ 0.17
ETFA-212ENST00000560179 PBX2P40425 430 aa16.12■□□□□ 0.17
ETFA-212ENST00000560179 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
ETFA-212ENST00000560179 DMRTA1Q5VZB9 504 aa16.08■□□□□ 0.16
ETFA-212ENST00000560179 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.16
ETFA-212ENST00000560179 FAM198AQ9UFP1 575 aa16.08■□□□□ 0.16
ETFA-212ENST00000560179 TSKSQ9UJT2 592 aa16.08■□□□□ 0.16
ETFA-212ENST00000560179 TRIM66O15016 1216 aa16.07■□□□□ 0.16
ETFA-212ENST00000560179 TRIM6-TRIM34B2RNG4 842 aa16.06■□□□□ 0.16
ETFA-212ENST00000560179 PROX2Q3B8N5 592 aa16.06■□□□□ 0.16
ETFA-212ENST00000560179 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
ETFA-212ENST00000560179 ONECUT3O60422 494 aaPredicted RBP16.04■□□□□ 0.16
ETFA-212ENST00000560179 ADGRG1Q9Y653 693 aa16.04■□□□□ 0.16
ETFA-212ENST00000560179 SLC4A5Q9BY07 1137 aa16.03■□□□□ 0.16
ETFA-212ENST00000560179 OATP04181 439 aa16.01■□□□□ 0.15
ETFA-212ENST00000560179 PACS2Q86VP3 889 aa16.01■□□□□ 0.15
ETFA-212ENST00000560179 C3orf80F5H4A9 247 aa15.98■□□□□ 0.15
ETFA-212ENST00000560179 PDE4DQ08499 809 aa15.98■□□□□ 0.15
ETFA-212ENST00000560179 KIAA1468Q9P260 1216 aa15.98■□□□□ 0.15
ETFA-212ENST00000560179 METTL3Q86U44 580 aaKnown RBP15.97■□□□□ 0.15
ETFA-212ENST00000560179 PXYLP1Q8TE99 480 aa15.97■□□□□ 0.15
ETFA-212ENST00000560179 PHOX2BQ99453 314 aa15.97■□□□□ 0.15
ETFA-212ENST00000560179 VPS9D1Q9Y2B5 631 aa15.97■□□□□ 0.15
ETFA-212ENST00000560179 BRPF1P55201 1214 aaPredicted RBP15.96■□□□□ 0.15
ETFA-212ENST00000560179 NUDT18Q6ZVK8 323 aa15.96■□□□□ 0.15
ETFA-212ENST00000560179 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
ETFA-212ENST00000560179 TATDN2Q93075 761 aa15.96■□□□□ 0.15
ETFA-212ENST00000560179 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
ETFA-212ENST00000560179 AMHR2Q16671 573 aa15.95■□□□□ 0.14
ETFA-212ENST00000560179 EYA1Q99502 592 aa15.95■□□□□ 0.14
ETFA-212ENST00000560179 RABGEF1Q9UJ41 708 aa15.95■□□□□ 0.14
ETFA-212ENST00000560179 PNMA3Q9UL41 463 aa15.95■□□□□ 0.14
ETFA-212ENST00000560179 LSM11P83369 360 aaKnown RBP eCLIP15.94■□□□□ 0.14
ETFA-212ENST00000560179 POTEGQ6S5H5 508 aa15.94■□□□□ 0.14
ETFA-212ENST00000560179 TK2O00142 265 aa15.93■□□□□ 0.14
ETFA-212ENST00000560179 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
ETFA-212ENST00000560179 POTEMA6NI47 508 aa15.91■□□□□ 0.14
ETFA-212ENST00000560179 SMAPO00193 183 aa15.9■□□□□ 0.14
ETFA-212ENST00000560179 ADGRD1Q6QNK2 874 aa15.89■□□□□ 0.13
ETFA-212ENST00000560179 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
ETFA-212ENST00000560179 BHMG1C9JSJ3 638 aaPredicted RBP15.87■□□□□ 0.13
ETFA-212ENST00000560179 NLRP7Q8WX94 980 aa15.87■□□□□ 0.13
ETFA-212ENST00000560179 GPBP1L1Q9HC44 474 aaPredicted RBP15.87■□□□□ 0.13
ETFA-212ENST00000560179 RCCD1A6NED2 376 aa15.86■□□□□ 0.13
ETFA-212ENST00000560179 PARP9Q8IXQ6 854 aa15.86■□□□□ 0.13
ETFA-212ENST00000560179 KRTAP3-3Q9BYR6 98 aa15.86■□□□□ 0.13
ETFA-212ENST00000560179 KRTAP3-2Q9BYR7 98 aa15.86■□□□□ 0.13
ETFA-212ENST00000560179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
ETFA-212ENST00000560179 MDM2Q00987 491 aaPredicted RBP15.85■□□□□ 0.13
ETFA-212ENST00000560179 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
ETFA-212ENST00000560179 TMUB1Q9BVT8 246 aa15.84■□□□□ 0.13
ETFA-212ENST00000560179 REPIN1Q9BWE0 567 aaKnown RBP15.84■□□□□ 0.13
ETFA-212ENST00000560179 SEPT9Q9UHD8 586 aaPredicted RBP15.84■□□□□ 0.13
ETFA-212ENST00000560179 CLCN1P35523 988 aa15.83■□□□□ 0.12
ETFA-212ENST00000560179 CDAN1Q8IWY9 1227 aa15.83■□□□□ 0.12
ETFA-212ENST00000560179 KDM4CQ9H3R0 1056 aa15.83■□□□□ 0.12
ETFA-212ENST00000560179 HRO43593 1189 aa15.82■□□□□ 0.12
ETFA-212ENST00000560179 DNAJB2P25686 324 aa15.82■□□□□ 0.12
ETFA-212ENST00000560179 NBPF3Q9H094 633 aa15.82■□□□□ 0.12
ETFA-212ENST00000560179 GPCPD1Q9NPB8 672 aa15.82■□□□□ 0.12
ETFA-212ENST00000560179 FAM98CQ17RN3 349 aaKnown RBP15.79■□□□□ 0.12
ETFA-212ENST00000560179 GIGYF2Q6Y7W6 1299 aaKnown RBP15.79■□□□□ 0.12
ETFA-212ENST00000560179 LAPTM4BQ86VI4 370 aa15.79■□□□□ 0.12
ETFA-212ENST00000560179 TMEM134Q9H6X4 195 aa15.78■□□□□ 0.12
ETFA-212ENST00000560179 MRPL50Q8N5N7 158 aaKnown RBP15.77■□□□□ 0.12
ETFA-212ENST00000560179 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms