RNA–Protein interactions for RNA: ENST00000560159.1

AC012170.3-201, humanhuman

TSL 2 BASIC

Gene AC012170.3, Length 297 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012170.3-201ENST00000560159 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
AC012170.3-201ENST00000560159 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
AC012170.3-201ENST00000560159 MARVELD3Q96A59 401 aa10.58□□□□□ -0.72
AC012170.3-201ENST00000560159 HIC1Q14526 733 aa10.57□□□□□ -0.72
AC012170.3-201ENST00000560159 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
AC012170.3-201ENST00000560159 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
AC012170.3-201ENST00000560159 LCE2DQ5TA82 110 aaPredicted RBP10.55□□□□□ -0.72
AC012170.3-201ENST00000560159 COL9A1P20849 921 aa10.54□□□□□ -0.72
AC012170.3-201ENST00000560159 BCL2L12Q9HB09 334 aa10.54□□□□□ -0.72
AC012170.3-201ENST00000560159 EMP3P54852 163 aa10.53□□□□□ -0.72
AC012170.3-201ENST00000560159 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
AC012170.3-201ENST00000560159 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
AC012170.3-201ENST00000560159 ERBB3P21860 1342 aa10.53□□□□□ -0.72
AC012170.3-201ENST00000560159 AK7Q96M32 723 aa10.52□□□□□ -0.73
AC012170.3-201ENST00000560159 CCDC102AQ96A19 550 aa10.51□□□□□ -0.73
AC012170.3-201ENST00000560159 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
AC012170.3-201ENST00000560159 IRF6O14896 467 aa10.5□□□□□ -0.73
AC012170.3-201ENST00000560159 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
AC012170.3-201ENST00000560159 POTEB3A0JP26 581 aa10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 TRIM66O15016 1216 aa10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 PTPREP23469 700 aa10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 POTEBQ6S5H4 581 aa10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
AC012170.3-201ENST00000560159 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
AC012170.3-201ENST00000560159 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
AC012170.3-201ENST00000560159 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
AC012170.3-201ENST00000560159 FAM198AQ9UFP1 575 aa10.47□□□□□ -0.73
AC012170.3-201ENST00000560159 PSEN2P49810 448 aa10.46□□□□□ -0.73
AC012170.3-201ENST00000560159 PRSS12P56730 875 aa10.46□□□□□ -0.73
AC012170.3-201ENST00000560159 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
AC012170.3-201ENST00000560159 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
AC012170.3-201ENST00000560159 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
AC012170.3-201ENST00000560159 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
AC012170.3-201ENST00000560159 AXIN2Q9Y2T1 843 aa10.45□□□□□ -0.74
AC012170.3-201ENST00000560159 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
AC012170.3-201ENST00000560159 PDE4DQ08499 809 aa10.43□□□□□ -0.74
AC012170.3-201ENST00000560159 GPBP1L1Q9HC44 474 aaPredicted RBP10.43□□□□□ -0.74
AC012170.3-201ENST00000560159 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
AC012170.3-201ENST00000560159 C3orf80F5H4A9 247 aa10.42□□□□□ -0.74
AC012170.3-201ENST00000560159 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
AC012170.3-201ENST00000560159 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
AC012170.3-201ENST00000560159 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
AC012170.3-201ENST00000560159 ADGRG1Q9Y653 693 aa10.42□□□□□ -0.74
AC012170.3-201ENST00000560159 DMRTA1Q5VZB9 504 aa10.41□□□□□ -0.74
AC012170.3-201ENST00000560159 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
AC012170.3-201ENST00000560159 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
AC012170.3-201ENST00000560159 TRIM6-TRIM34B2RNG4 842 aa10.39□□□□□ -0.75
AC012170.3-201ENST00000560159 AMHR2Q16671 573 aa10.39□□□□□ -0.75
AC012170.3-201ENST00000560159 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
AC012170.3-201ENST00000560159 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
AC012170.3-201ENST00000560159 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
AC012170.3-201ENST00000560159 PARP9Q8IXQ6 854 aa10.37□□□□□ -0.75
AC012170.3-201ENST00000560159 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
AC012170.3-201ENST00000560159 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
AC012170.3-201ENST00000560159 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
AC012170.3-201ENST00000560159 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
AC012170.3-201ENST00000560159 OATP04181 439 aa10.35□□□□□ -0.75
AC012170.3-201ENST00000560159 SMAPO00193 183 aa10.34□□□□□ -0.75
AC012170.3-201ENST00000560159 PBX2P40425 430 aa10.34□□□□□ -0.75
AC012170.3-201ENST00000560159 NUDT18Q6ZVK8 323 aa10.34□□□□□ -0.75
AC012170.3-201ENST00000560159 EYA1Q99502 592 aa10.34□□□□□ -0.75
AC012170.3-201ENST00000560159 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
AC012170.3-201ENST00000560159 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
AC012170.3-201ENST00000560159 TTLL12Q14166 644 aaPredicted RBP10.33□□□□□ -0.76
AC012170.3-201ENST00000560159 TATDN2Q93075 761 aa10.33□□□□□ -0.76
AC012170.3-201ENST00000560159 PNMA3Q9UL41 463 aa10.33□□□□□ -0.76
AC012170.3-201ENST00000560159 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
AC012170.3-201ENST00000560159 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
AC012170.3-201ENST00000560159 TMUB1Q9BVT8 246 aa10.32□□□□□ -0.76
AC012170.3-201ENST00000560159 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
AC012170.3-201ENST00000560159 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
AC012170.3-201ENST00000560159 ONECUT3O60422 494 aaPredicted RBP10.3□□□□□ -0.76
AC012170.3-201ENST00000560159 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
AC012170.3-201ENST00000560159 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
AC012170.3-201ENST00000560159 RCCD1A6NED2 376 aa10.29□□□□□ -0.76
AC012170.3-201ENST00000560159 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
AC012170.3-201ENST00000560159 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
AC012170.3-201ENST00000560159 MS4A1P11836 297 aa10.27□□□□□ -0.77
AC012170.3-201ENST00000560159 CLCN1P35523 988 aa10.27□□□□□ -0.77
AC012170.3-201ENST00000560159 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
AC012170.3-201ENST00000560159 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
AC012170.3-201ENST00000560159 GPCPD1Q9NPB8 672 aa10.27□□□□□ -0.77
AC012170.3-201ENST00000560159 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
AC012170.3-201ENST00000560159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
AC012170.3-201ENST00000560159 DNAJB2P25686 324 aa10.24□□□□□ -0.77
AC012170.3-201ENST00000560159 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
AC012170.3-201ENST00000560159 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
AC012170.3-201ENST00000560159 PLEKHG3A1L390 1219 aa10.23□□□□□ -0.77
AC012170.3-201ENST00000560159 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
AC012170.3-201ENST00000560159 TK2O00142 265 aa10.23□□□□□ -0.77
AC012170.3-201ENST00000560159 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
AC012170.3-201ENST00000560159 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
AC012170.3-201ENST00000560159 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
AC012170.3-201ENST00000560159 SSTR3P32745 418 aaPredicted RBP10.22□□□□□ -0.77
AC012170.3-201ENST00000560159 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
AC012170.3-201ENST00000560159 TMEM134Q9H6X4 195 aa10.22□□□□□ -0.77
AC012170.3-201ENST00000560159 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
AC012170.3-201ENST00000560159 HRO43593 1189 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms