RNA–Protein interactions for RNA: ENST00000560153.2

LINC00052-201, long intergenic non-protein coding RNA 52, humanhuman

TSL 2 BASIC

Gene LINC00052, Length 1,966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052-201ENST00000560153 B4GALNT3Q6L9W6 998 aa15.72■□□□□ 0.11
LINC00052-201ENST00000560153 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
LINC00052-201ENST00000560153 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.11
LINC00052-201ENST00000560153 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
LINC00052-201ENST00000560153 KIAA0556O60303 1618 aa15.7■□□□□ 0.1
LINC00052-201ENST00000560153 KTN1Q86UP2 1357 aaKnown RBP15.7■□□□□ 0.1
LINC00052-201ENST00000560153 ADGRL2O95490 1459 aa15.69■□□□□ 0.1
LINC00052-201ENST00000560153 DHX29Q7Z478 1369 aaKnown RBP15.69■□□□□ 0.1
LINC00052-201ENST00000560153 KDM5CP41229 1560 aa15.69■□□□□ 0.1
LINC00052-201ENST00000560153 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
LINC00052-201ENST00000560153 PZPP20742 1482 aa15.68■□□□□ 0.1
LINC00052-201ENST00000560153 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
LINC00052-201ENST00000560153 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00052-201ENST00000560153 BRD2P25440 801 aaKnown RBP15.67■□□□□ 0.1
LINC00052-201ENST00000560153 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
LINC00052-201ENST00000560153 PDE4CQ08493 712 aa15.66■□□□□ 0.1
LINC00052-201ENST00000560153 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
LINC00052-201ENST00000560153 BCORL1Q5H9F3 1711 aa15.66■□□□□ 0.1
LINC00052-201ENST00000560153 USP47Q96K76 1375 aa15.65■□□□□ 0.1
LINC00052-201ENST00000560153 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
LINC00052-201ENST00000560153 ARHGEF12Q9NZN5 1544 aa15.65■□□□□ 0.1
LINC00052-201ENST00000560153 HSP90B1P14625 803 aaKnown RBP15.64■□□□□ 0.09
LINC00052-201ENST00000560153 FOXD1Q16676 465 aa15.64■□□□□ 0.09
LINC00052-201ENST00000560153 CCDC136Q96JN2 1154 aa15.64■□□□□ 0.09
LINC00052-201ENST00000560153 PTPRGP23470 1445 aa15.64■□□□□ 0.09
LINC00052-201ENST00000560153 RALGAPBQ86X10 1494 aa15.64■□□□□ 0.09
LINC00052-201ENST00000560153 CAMSAP2Q08AD1 1489 aa15.64■□□□□ 0.09
LINC00052-201ENST00000560153 NECTIN2Q92692 538 aa15.64■□□□□ 0.09
LINC00052-201ENST00000560153 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
LINC00052-201ENST00000560153 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
LINC00052-201ENST00000560153 DEKP35659 375 aaKnown RBP15.62■□□□□ 0.09
LINC00052-201ENST00000560153 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
LINC00052-201ENST00000560153 IPO9Q96P70 1041 aaKnown RBP15.61■□□□□ 0.09
LINC00052-201ENST00000560153 BRD4O60885 1362 aaPredicted RBP15.6■□□□□ 0.09
LINC00052-201ENST00000560153 ANKRD30AQ9BXX3 1397 aa15.59■□□□□ 0.09
LINC00052-201ENST00000560153 E9PCH4 1651 aa15.59■□□□□ 0.09
LINC00052-201ENST00000560153 PKD2Q13563 968 aa15.58■□□□□ 0.09
LINC00052-201ENST00000560153 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.09
LINC00052-201ENST00000560153 SHANK2Q9UPX8 1470 aa15.58■□□□□ 0.08
LINC00052-201ENST00000560153 RALBP1Q15311 655 aa15.58■□□□□ 0.08
LINC00052-201ENST00000560153 BBXQ8WY36 941 aaPredicted RBP15.58■□□□□ 0.08
LINC00052-201ENST00000560153 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.58■□□□□ 0.08
LINC00052-201ENST00000560153 LRPPRCP42704 1394 aaKnown RBP15.58■□□□□ 0.08
LINC00052-201ENST00000560153 ARID3AQ99856 593 aa15.57■□□□□ 0.08
LINC00052-201ENST00000560153 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
LINC00052-201ENST00000560153 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
LINC00052-201ENST00000560153 ZBTB47Q9UFB7 747 aaPredicted RBP15.56■□□□□ 0.08
LINC00052-201ENST00000560153 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
LINC00052-201ENST00000560153 RTL5Q5HYW3 569 aaPredicted RBP15.56■□□□□ 0.08
LINC00052-201ENST00000560153 MYBBP1AQ9BQG0 1328 aaKnown RBP15.55■□□□□ 0.08
LINC00052-201ENST00000560153 PDE3BQ13370 1112 aa15.54■□□□□ 0.08
LINC00052-201ENST00000560153 INSRP06213 1382 aa15.53■□□□□ 0.08
LINC00052-201ENST00000560153 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
LINC00052-201ENST00000560153 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
LINC00052-201ENST00000560153 CFDP1Q9UEE9 299 aaPredicted RBP15.53■□□□□ 0.08
LINC00052-201ENST00000560153 ABCA8O94911 1581 aa15.53■□□□□ 0.08
LINC00052-201ENST00000560153 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
LINC00052-201ENST00000560153 ANKRD50Q9ULJ7 1429 aa15.52■□□□□ 0.08
LINC00052-201ENST00000560153 ZNF644Q9H582 1327 aaPredicted RBP15.52■□□□□ 0.07
LINC00052-201ENST00000560153 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
LINC00052-201ENST00000560153 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
LINC00052-201ENST00000560153 MS4A1P11836 297 aa15.49■□□□□ 0.07
LINC00052-201ENST00000560153 PUS7Q96PZ0 661 aaKnown RBP15.49■□□□□ 0.07
LINC00052-201ENST00000560153 CDC42BPAQ5VT25 1732 aa15.49■□□□□ 0.07
LINC00052-201ENST00000560153 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
LINC00052-201ENST00000560153 RRP1P56182 461 aaKnown RBP15.49■□□□□ 0.07
LINC00052-201ENST00000560153 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
LINC00052-201ENST00000560153 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
LINC00052-201ENST00000560153 POLR3GLQ9BT43 218 aa15.48■□□□□ 0.07
LINC00052-201ENST00000560153 UHRF1BP1LA0JNW5 1464 aa15.48■□□□□ 0.07
LINC00052-201ENST00000560153 LAMC1P11047 1609 aa15.47■□□□□ 0.07
LINC00052-201ENST00000560153 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
LINC00052-201ENST00000560153 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
LINC00052-201ENST00000560153 ATP10BO94823 1461 aa15.46■□□□□ 0.07
LINC00052-201ENST00000560153 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
LINC00052-201ENST00000560153 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
LINC00052-201ENST00000560153 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 USP35Q9P2H5 1018 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 RIMBP3Q9UFD9 1639 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 ARHGEF5Q12774 1597 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 ABCC2Q92887 1545 aa15.45■□□□□ 0.06
LINC00052-201ENST00000560153 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
LINC00052-201ENST00000560153 NLRP13Q86W25 1043 aa15.44■□□□□ 0.06
LINC00052-201ENST00000560153 C9orf84Q5VXU9 1444 aa15.44■□□□□ 0.06
LINC00052-201ENST00000560153 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
LINC00052-201ENST00000560153 TRPM1Q7Z4N2 1603 aa15.43■□□□□ 0.06
LINC00052-201ENST00000560153 NUP155O75694 1391 aa15.43■□□□□ 0.06
LINC00052-201ENST00000560153 ZBTB7CA1YPR0 619 aa15.43■□□□□ 0.06
LINC00052-201ENST00000560153 PARD3Q8TEW0 1356 aa15.43■□□□□ 0.06
LINC00052-201ENST00000560153 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
LINC00052-201ENST00000560153 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
LINC00052-201ENST00000560153 EIF2AK4Q9P2K8 1649 aaKnown RBP15.4■□□□□ 0.06
LINC00052-201ENST00000560153 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
LINC00052-201ENST00000560153 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
LINC00052-201ENST00000560153 ST20-MTHFSA0A0A6YYL1 179 aa15.38■□□□□ 0.05
LINC00052-201ENST00000560153 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
LINC00052-201ENST00000560153 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
LINC00052-201ENST00000560153 ZNF777Q9ULD5 760 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms