RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 TCOF1Q13428 1488 aaKnown RBP26.05■■□□□ 1.76
CPNE6-213ENST00000559778 GGT6Q6P531 493 aa26.03■■□□□ 1.76
CPNE6-213ENST00000559778 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
CPNE6-213ENST00000559778 DNMT1P26358 1616 aaKnown RBP26.03■■□□□ 1.76
CPNE6-213ENST00000559778 NCKAP5LQ9HCH0 1330 aa26■■□□□ 1.75
CPNE6-213ENST00000559778 KDM5DQ9BY66 1539 aa25.98■■□□□ 1.75
CPNE6-213ENST00000559778 A2ML1A8K2U0 1454 aa25.98■■□□□ 1.75
CPNE6-213ENST00000559778 ILDR2Q71H61 639 aa25.97■■□□□ 1.75
CPNE6-213ENST00000559778 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
CPNE6-213ENST00000559778 ZNF335Q9H4Z2 1342 aaPredicted RBP25.96■■□□□ 1.75
CPNE6-213ENST00000559778 PKD2Q13563 968 aa25.96■■□□□ 1.75
CPNE6-213ENST00000559778 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
CPNE6-213ENST00000559778 RNF17Q9BXT8 1623 aaKnown RBP25.95■■□□□ 1.74
CPNE6-213ENST00000559778 EIF2AK4Q9P2K8 1649 aaKnown RBP25.95■■□□□ 1.74
CPNE6-213ENST00000559778 TSPY4P0CV99 314 aa25.94■■□□□ 1.74
CPNE6-213ENST00000559778 TSPY10P0CW01 314 aa25.94■■□□□ 1.74
CPNE6-213ENST00000559778 NEURL4Q96JN8 1562 aa25.93■■□□□ 1.74
CPNE6-213ENST00000559778 ZC3H13Q5T200 1668 aaKnown RBP25.93■■□□□ 1.74
CPNE6-213ENST00000559778 KANK4Q5T7N3 995 aaPredicted RBP25.92■■□□□ 1.74
CPNE6-213ENST00000559778 CROCC2H7BZ55 1655 aa25.91■■□□□ 1.74
CPNE6-213ENST00000559778 KIF3BO15066 747 aa25.91■■□□□ 1.74
CPNE6-213ENST00000559778 PZPP20742 1482 aa25.9■■□□□ 1.74
CPNE6-213ENST00000559778 SOCS7O14512 581 aa25.86■■□□□ 1.73
CPNE6-213ENST00000559778 TNRQ92752 1358 aa25.84■■□□□ 1.73
CPNE6-213ENST00000559778 PTPN23Q9H3S7 1636 aa25.84■■□□□ 1.73
CPNE6-213ENST00000559778 UBAP1LF5GYI3 381 aa25.83■■□□□ 1.73
CPNE6-213ENST00000559778 WASHC2CQ9Y4E1 1318 aa25.83■■□□□ 1.73
CPNE6-213ENST00000559778 SHANK2Q9UPX8 1470 aa25.81■■□□□ 1.72
CPNE6-213ENST00000559778 CPS1P31327 1500 aa25.81■■□□□ 1.72
CPNE6-213ENST00000559778 DUOX2Q9NRD8 1548 aa25.81■■□□□ 1.72
CPNE6-213ENST00000559778 DEPDC5O75140 1603 aa25.81■■□□□ 1.72
CPNE6-213ENST00000559778 MROH1Q8NDA8 1641 aa25.81■■□□□ 1.72
CPNE6-213ENST00000559778 APLP2Q06481 763 aa25.8■■□□□ 1.72
CPNE6-213ENST00000559778 CEP152O94986 1710 aa25.8■■□□□ 1.72
CPNE6-213ENST00000559778 ABCC3O15438 1527 aa25.79■■□□□ 1.72
CPNE6-213ENST00000559778 FBXO31Q5XUX0 539 aaPredicted RBP25.79■■□□□ 1.72
CPNE6-213ENST00000559778 NLRP1Q9C000 1473 aa25.78■■□□□ 1.72
CPNE6-213ENST00000559778 UGGT1Q9NYU2 1555 aa25.77■■□□□ 1.72
CPNE6-213ENST00000559778 VWDEQ8N2E2 1590 aa25.76■■□□□ 1.71
CPNE6-213ENST00000559778 IQGAP1P46940 1657 aa25.75■■□□□ 1.71
CPNE6-213ENST00000559778 CFAP65Q6ZU64 1925 aaKnown RBP25.74■■□□□ 1.71
CPNE6-213ENST00000559778 PRDM15P57071 1507 aaPredicted RBP25.73■■□□□ 1.71
CPNE6-213ENST00000559778 MED14O60244 1454 aa25.72■■□□□ 1.71
CPNE6-213ENST00000559778 FGD6Q6ZV73 1430 aa25.72■■□□□ 1.71
CPNE6-213ENST00000559778 STRCP1A6NGW2 1772 aa25.72■■□□□ 1.71
CPNE6-213ENST00000559778 ABCC5O15440 1437 aa25.71■■□□□ 1.71
CPNE6-213ENST00000559778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.71■■□□□ 1.71
CPNE6-213ENST00000559778 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
CPNE6-213ENST00000559778 DAPK1P53355 1430 aa25.7■■□□□ 1.7
CPNE6-213ENST00000559778 UBR1Q8IWV7 1749 aa25.68■■□□□ 1.7
CPNE6-213ENST00000559778 KIF15Q9NS87 1388 aa25.68■■□□□ 1.7
CPNE6-213ENST00000559778 ERVK-7P63135 1459 aa25.66■■□□□ 1.7
CPNE6-213ENST00000559778 MED1Q15648 1581 aaPredicted RBP25.66■■□□□ 1.7
CPNE6-213ENST00000559778 NPHP4O75161 1426 aaPredicted RBP25.66■■□□□ 1.7
CPNE6-213ENST00000559778 ANKLE2Q86XL3 938 aa25.66■■□□□ 1.7
CPNE6-213ENST00000559778 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
CPNE6-213ENST00000559778 ALKQ9UM73 1620 aa25.66■■□□□ 1.7
CPNE6-213ENST00000559778 SYNMO15061 1565 aa25.65■■□□□ 1.7
CPNE6-213ENST00000559778 ARHGAP31Q2M1Z3 1444 aa25.62■■□□□ 1.69
CPNE6-213ENST00000559778 TOM1O60784 492 aa25.59■■□□□ 1.69
CPNE6-213ENST00000559778 SCAF1Q9H7N4 1312 aaKnown RBP25.59■■□□□ 1.69
CPNE6-213ENST00000559778 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.69
CPNE6-213ENST00000559778 HSPA1LP34931 641 aa25.58■■□□□ 1.69
CPNE6-213ENST00000559778 PIP4K2BP78356 416 aa25.57■■□□□ 1.68
CPNE6-213ENST00000559778 RRP7BPQ9NSQ0 103 aa25.57■■□□□ 1.68
CPNE6-213ENST00000559778 ADGRL2O95490 1459 aa25.56■■□□□ 1.68
CPNE6-213ENST00000559778 XIRP1Q702N8 1843 aaKnown RBP25.56■■□□□ 1.68
CPNE6-213ENST00000559778 KDM5AP29375 1690 aaKnown RBP25.55■■□□□ 1.68
CPNE6-213ENST00000559778 LMTK2Q8IWU2 1503 aa25.54■■□□□ 1.68
CPNE6-213ENST00000559778 LRRC7Q96NW7 1537 aa25.53■■□□□ 1.68
CPNE6-213ENST00000559778 KANK1Q14678 1352 aa25.53■■□□□ 1.68
CPNE6-213ENST00000559778 PIK3C2BO00750 1634 aa25.5■■□□□ 1.67
CPNE6-213ENST00000559778 SLIT1O75093 1534 aa25.5■■□□□ 1.67
CPNE6-213ENST00000559778 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
CPNE6-213ENST00000559778 ARHGAP23Q9P227 1491 aa25.49■■□□□ 1.67
CPNE6-213ENST00000559778 EFCAB6Q5THR3 1501 aa25.47■■□□□ 1.67
CPNE6-213ENST00000559778 CHIC2Q9UKJ5 165 aa25.46■■□□□ 1.67
CPNE6-213ENST00000559778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.44■■□□□ 1.66
CPNE6-213ENST00000559778 GCC2Q8IWJ2 1684 aa25.41■■□□□ 1.66
CPNE6-213ENST00000559778 TET3O43151 1660 aa25.4■■□□□ 1.66
CPNE6-213ENST00000559778 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
CPNE6-213ENST00000559778 ANKRD50Q9ULJ7 1429 aa25.39■■□□□ 1.66
CPNE6-213ENST00000559778 RPRD2Q5VT52 1461 aaKnown RBP25.38■■□□□ 1.65
CPNE6-213ENST00000559778 UNC13BO14795 1591 aa25.38■■□□□ 1.65
CPNE6-213ENST00000559778 NOS1P29475 1434 aa25.37■■□□□ 1.65
CPNE6-213ENST00000559778 LTKP29376 864 aa25.36■■□□□ 1.65
CPNE6-213ENST00000559778 ADGRB3O60242 1522 aa25.34■■□□□ 1.65
CPNE6-213ENST00000559778 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
CPNE6-213ENST00000559778 TXNDC2Q86VQ3 553 aa25.33■■□□□ 1.65
CPNE6-213ENST00000559778 EID1Q9Y6B2 187 aa25.32■■□□□ 1.64
CPNE6-213ENST00000559778 MYO5BQ9ULV0 1848 aa25.32■■□□□ 1.64
CPNE6-213ENST00000559778 ROCK1Q13464 1354 aa25.31■■□□□ 1.64
CPNE6-213ENST00000559778 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
CPNE6-213ENST00000559778 IQGAP3Q86VI3 1631 aa25.28■■□□□ 1.64
CPNE6-213ENST00000559778 IDI1Q13907 227 aa25.28■■□□□ 1.64
CPNE6-213ENST00000559778 STAG3Q9UJ98 1225 aa25.28■■□□□ 1.64
CPNE6-213ENST00000559778 E9PCH4 1651 aa25.27■■□□□ 1.64
CPNE6-213ENST00000559778 SLC52A1Q9NWF4 448 aa25.27■■□□□ 1.64
CPNE6-213ENST00000559778 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
CPNE6-213ENST00000559778 NWD1Q149M9 1564 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms