RNA–Protein interactions for RNA: ENST00000559670.5

LRRC49-218, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-218ENST00000559670 MROH2AA6NES4 1674 aa12.57□□□□□ -0.4
LRRC49-218ENST00000559670 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
LRRC49-218ENST00000559670 MYO3AQ8NEV4 1616 aa12.55□□□□□ -0.4
LRRC49-218ENST00000559670 HAX1O00165 279 aa12.55□□□□□ -0.4
LRRC49-218ENST00000559670 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
LRRC49-218ENST00000559670 MYT1LQ9UL68 1186 aa12.54□□□□□ -0.4
LRRC49-218ENST00000559670 CEP170BQ9Y4F5 1589 aaPredicted RBP12.54□□□□□ -0.4
LRRC49-218ENST00000559670 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
LRRC49-218ENST00000559670 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
LRRC49-218ENST00000559670 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
LRRC49-218ENST00000559670 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
LRRC49-218ENST00000559670 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
LRRC49-218ENST00000559670 AFAP1Q8N556 730 aa12.51□□□□□ -0.41
LRRC49-218ENST00000559670 MLH3Q9UHC1 1453 aa12.5□□□□□ -0.41
LRRC49-218ENST00000559670 SETD1AO15047 1707 aaKnown RBP12.49□□□□□ -0.41
LRRC49-218ENST00000559670 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
LRRC49-218ENST00000559670 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
LRRC49-218ENST00000559670 POLR1AO95602 1720 aaPredicted RBP12.48□□□□□ -0.41
LRRC49-218ENST00000559670 NEURL4Q96JN8 1562 aa12.45□□□□□ -0.42
LRRC49-218ENST00000559670 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
LRRC49-218ENST00000559670 CDK13Q14004 1512 aaKnown RBP12.45□□□□□ -0.42
LRRC49-218ENST00000559670 VWDEQ8N2E2 1590 aa12.44□□□□□ -0.42
LRRC49-218ENST00000559670 EVX2Q03828 476 aa12.44□□□□□ -0.42
LRRC49-218ENST00000559670 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
LRRC49-218ENST00000559670 RNF17Q9BXT8 1623 aaKnown RBP12.44□□□□□ -0.42
LRRC49-218ENST00000559670 A2ML1A8K2U0 1454 aa12.43□□□□□ -0.42
LRRC49-218ENST00000559670 DNMT1P26358 1616 aaKnown RBP12.43□□□□□ -0.42
LRRC49-218ENST00000559670 KIDINS220Q9ULH0 1771 aa12.42□□□□□ -0.42
LRRC49-218ENST00000559670 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
LRRC49-218ENST00000559670 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
LRRC49-218ENST00000559670 KIF14Q15058 1648 aa12.4□□□□□ -0.42
LRRC49-218ENST00000559670 SYNMO15061 1565 aa12.39□□□□□ -0.43
LRRC49-218ENST00000559670 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
LRRC49-218ENST00000559670 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
LRRC49-218ENST00000559670 ABCC1P33527 1531 aa12.37□□□□□ -0.43
LRRC49-218ENST00000559670 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
LRRC49-218ENST00000559670 CDC42BPBQ9Y5S2 1711 aa12.36□□□□□ -0.43
LRRC49-218ENST00000559670 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
LRRC49-218ENST00000559670 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
LRRC49-218ENST00000559670 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
LRRC49-218ENST00000559670 ANKLE2Q86XL3 938 aa12.34□□□□□ -0.43
LRRC49-218ENST00000559670 NPHP4O75161 1426 aaPredicted RBP12.34□□□□□ -0.43
LRRC49-218ENST00000559670 MED14O60244 1454 aa12.34□□□□□ -0.43
LRRC49-218ENST00000559670 DEPDC5O75140 1603 aa12.33□□□□□ -0.43
LRRC49-218ENST00000559670 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
LRRC49-218ENST00000559670 PREX2Q70Z35 1606 aa12.32□□□□□ -0.44
LRRC49-218ENST00000559670 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
LRRC49-218ENST00000559670 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
LRRC49-218ENST00000559670 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
LRRC49-218ENST00000559670 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
LRRC49-218ENST00000559670 CLIP1P30622 1438 aa12.3□□□□□ -0.44
LRRC49-218ENST00000559670 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
LRRC49-218ENST00000559670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
LRRC49-218ENST00000559670 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
LRRC49-218ENST00000559670 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
LRRC49-218ENST00000559670 TNRQ92752 1358 aa12.29□□□□□ -0.44
LRRC49-218ENST00000559670 GGT6Q6P531 493 aa12.28□□□□□ -0.44
LRRC49-218ENST00000559670 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
LRRC49-218ENST00000559670 A2MP01023 1474 aa12.27□□□□□ -0.45
LRRC49-218ENST00000559670 ATP7AQ04656 1500 aa12.26□□□□□ -0.45
LRRC49-218ENST00000559670 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
LRRC49-218ENST00000559670 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
LRRC49-218ENST00000559670 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
LRRC49-218ENST00000559670 SPAG9O60271 1321 aaKnown RBP12.25□□□□□ -0.45
LRRC49-218ENST00000559670 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
LRRC49-218ENST00000559670 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
LRRC49-218ENST00000559670 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
LRRC49-218ENST00000559670 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
LRRC49-218ENST00000559670 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
LRRC49-218ENST00000559670 PZPP20742 1482 aa12.22□□□□□ -0.45
LRRC49-218ENST00000559670 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
LRRC49-218ENST00000559670 ZC3H13Q5T200 1668 aaKnown RBP12.22□□□□□ -0.45
LRRC49-218ENST00000559670 SYCP2Q9BX26 1530 aa12.21□□□□□ -0.45
LRRC49-218ENST00000559670 FMN1Q68DA7 1419 aa12.21□□□□□ -0.45
LRRC49-218ENST00000559670 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.45
LRRC49-218ENST00000559670 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.45
LRRC49-218ENST00000559670 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
LRRC49-218ENST00000559670 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
LRRC49-218ENST00000559670 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
LRRC49-218ENST00000559670 JCADQ9P266 1359 aa12.19□□□□□ -0.46
LRRC49-218ENST00000559670 KDM5DQ9BY66 1539 aa12.19□□□□□ -0.46
LRRC49-218ENST00000559670 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
LRRC49-218ENST00000559670 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
LRRC49-218ENST00000559670 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
LRRC49-218ENST00000559670 LRRC9Q6ZRR7 1453 aa12.17□□□□□ -0.46
LRRC49-218ENST00000559670 FKBP8Q14318 412 aa12.17□□□□□ -0.46
LRRC49-218ENST00000559670 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
LRRC49-218ENST00000559670 ZNF777Q9ULD5 760 aaPredicted RBP12.16□□□□□ -0.46
LRRC49-218ENST00000559670 RXRBP28702 533 aa12.15□□□□□ -0.46
LRRC49-218ENST00000559670 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRRC49-218ENST00000559670 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
LRRC49-218ENST00000559670 LRP6O75581 1613 aa12.15□□□□□ -0.47
LRRC49-218ENST00000559670 GABBR2O75899 941 aa12.14□□□□□ -0.47
LRRC49-218ENST00000559670 CD44P16070 742 aaKnown RBP12.14□□□□□ -0.47
LRRC49-218ENST00000559670 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
LRRC49-218ENST00000559670 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
LRRC49-218ENST00000559670 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
LRRC49-218ENST00000559670 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
LRRC49-218ENST00000559670 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
LRRC49-218ENST00000559670 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms