RNA–Protein interactions for RNA: ENST00000559422.1

LRRC49-216, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-216ENST00000559422 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
LRRC49-216ENST00000559422 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.24
LRRC49-216ENST00000559422 KRI1Q8N9T8 703 aaKnown RBP13.57□□□□□ -0.24
LRRC49-216ENST00000559422 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
LRRC49-216ENST00000559422 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
LRRC49-216ENST00000559422 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
LRRC49-216ENST00000559422 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
LRRC49-216ENST00000559422 AK7Q96M32 723 aa13.53□□□□□ -0.24
LRRC49-216ENST00000559422 ERBB3P21860 1342 aa13.5□□□□□ -0.25
LRRC49-216ENST00000559422 FECHP22830 423 aa13.5□□□□□ -0.25
LRRC49-216ENST00000559422 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
LRRC49-216ENST00000559422 IRF6O14896 467 aa13.49□□□□□ -0.25
LRRC49-216ENST00000559422 PTPREP23469 700 aa13.49□□□□□ -0.25
LRRC49-216ENST00000559422 EMP3P54852 163 aa13.48□□□□□ -0.25
LRRC49-216ENST00000559422 RBM27Q9P2N5 1060 aaKnown RBP13.47□□□□□ -0.25
LRRC49-216ENST00000559422 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
LRRC49-216ENST00000559422 MARVELD3Q96A59 401 aa13.46□□□□□ -0.25
LRRC49-216ENST00000559422 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
LRRC49-216ENST00000559422 COL9A1P20849 921 aa13.43□□□□□ -0.26
LRRC49-216ENST00000559422 PRSS12P56730 875 aa13.43□□□□□ -0.26
LRRC49-216ENST00000559422 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
LRRC49-216ENST00000559422 TRIM66O15016 1216 aa13.42□□□□□ -0.26
LRRC49-216ENST00000559422 TTC13Q8NBP0 860 aa13.42□□□□□ -0.26
LRRC49-216ENST00000559422 LCE2DQ5TA82 110 aaPredicted RBP13.41□□□□□ -0.26
LRRC49-216ENST00000559422 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
LRRC49-216ENST00000559422 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
LRRC49-216ENST00000559422 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
LRRC49-216ENST00000559422 PADI6Q6TGC4 694 aa13.4□□□□□ -0.26
LRRC49-216ENST00000559422 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
LRRC49-216ENST00000559422 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
LRRC49-216ENST00000559422 ZNF687Q8N1G0 1237 aa13.38□□□□□ -0.27
LRRC49-216ENST00000559422 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
LRRC49-216ENST00000559422 PBX2P40425 430 aa13.37□□□□□ -0.27
LRRC49-216ENST00000559422 ONECUT3O60422 494 aaPredicted RBP13.35□□□□□ -0.27
LRRC49-216ENST00000559422 OATP04181 439 aa13.35□□□□□ -0.27
LRRC49-216ENST00000559422 PDE4DQ08499 809 aa13.35□□□□□ -0.27
LRRC49-216ENST00000559422 AMHR2Q16671 573 aa13.35□□□□□ -0.27
LRRC49-216ENST00000559422 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
LRRC49-216ENST00000559422 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
LRRC49-216ENST00000559422 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
LRRC49-216ENST00000559422 ADGRG1Q9Y653 693 aa13.34□□□□□ -0.27
LRRC49-216ENST00000559422 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
LRRC49-216ENST00000559422 PSEN2P49810 448 aa13.33□□□□□ -0.28
LRRC49-216ENST00000559422 TSKSQ9UJT2 592 aa13.33□□□□□ -0.28
LRRC49-216ENST00000559422 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
LRRC49-216ENST00000559422 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
LRRC49-216ENST00000559422 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
LRRC49-216ENST00000559422 SLC4A5Q9BY07 1137 aa13.32□□□□□ -0.28
LRRC49-216ENST00000559422 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
LRRC49-216ENST00000559422 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
LRRC49-216ENST00000559422 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
LRRC49-216ENST00000559422 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
LRRC49-216ENST00000559422 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
LRRC49-216ENST00000559422 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
LRRC49-216ENST00000559422 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
LRRC49-216ENST00000559422 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
LRRC49-216ENST00000559422 PHOX2BQ99453 314 aa13.27□□□□□ -0.29
LRRC49-216ENST00000559422 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
LRRC49-216ENST00000559422 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
LRRC49-216ENST00000559422 EYA1Q99502 592 aa13.25□□□□□ -0.29
LRRC49-216ENST00000559422 GPBP1L1Q9HC44 474 aaPredicted RBP13.25□□□□□ -0.29
LRRC49-216ENST00000559422 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
LRRC49-216ENST00000559422 TATDN2Q93075 761 aa13.24□□□□□ -0.29
LRRC49-216ENST00000559422 KDM4CQ9H3R0 1056 aa13.24□□□□□ -0.29
LRRC49-216ENST00000559422 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
LRRC49-216ENST00000559422 KIAA1468Q9P260 1216 aa13.23□□□□□ -0.29
LRRC49-216ENST00000559422 RABGEF1Q9UJ41 708 aa13.23□□□□□ -0.29
LRRC49-216ENST00000559422 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
LRRC49-216ENST00000559422 CLCN1P35523 988 aa13.22□□□□□ -0.29
LRRC49-216ENST00000559422 TTLL12Q14166 644 aaPredicted RBP13.22□□□□□ -0.29
LRRC49-216ENST00000559422 TMUB1Q9BVT8 246 aa13.22□□□□□ -0.29
LRRC49-216ENST00000559422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.21□□□□□ -0.29
LRRC49-216ENST00000559422 VPS9D1Q9Y2B5 631 aa13.21□□□□□ -0.29
LRRC49-216ENST00000559422 C3orf80F5H4A9 247 aa13.2□□□□□ -0.3
LRRC49-216ENST00000559422 TK2O00142 265 aa13.2□□□□□ -0.3
LRRC49-216ENST00000559422 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
LRRC49-216ENST00000559422 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
LRRC49-216ENST00000559422 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
LRRC49-216ENST00000559422 DAXXQ9UER7 740 aaPredicted RBP13.19□□□□□ -0.3
LRRC49-216ENST00000559422 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
LRRC49-216ENST00000559422 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
LRRC49-216ENST00000559422 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
LRRC49-216ENST00000559422 GIGYF2Q6Y7W6 1299 aaKnown RBP13.17□□□□□ -0.3
LRRC49-216ENST00000559422 DNAJB2P25686 324 aa13.16□□□□□ -0.3
LRRC49-216ENST00000559422 SMAPO00193 183 aa13.15□□□□□ -0.3
LRRC49-216ENST00000559422 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
LRRC49-216ENST00000559422 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
LRRC49-216ENST00000559422 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
LRRC49-216ENST00000559422 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
LRRC49-216ENST00000559422 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
LRRC49-216ENST00000559422 TMEM134Q9H6X4 195 aa13.12□□□□□ -0.31
LRRC49-216ENST00000559422 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
LRRC49-216ENST00000559422 DDRGK1Q96HY6 314 aa13.11□□□□□ -0.31
LRRC49-216ENST00000559422 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
LRRC49-216ENST00000559422 MS4A1P11836 297 aa13.1□□□□□ -0.31
LRRC49-216ENST00000559422 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
LRRC49-216ENST00000559422 FAM117AQ9C073 453 aa13.1□□□□□ -0.31
LRRC49-216ENST00000559422 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
LRRC49-216ENST00000559422 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
LRRC49-216ENST00000559422 HRO43593 1189 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms