RNA–Protein interactions for RNA: ENST00000559274.1

MARK3-218, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-218ENST00000559274 ZMYM3Q14202 1370 aa14.34□□□□□ -0.11
MARK3-218ENST00000559274 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
MARK3-218ENST00000559274 KIF3BO15066 747 aa14.34□□□□□ -0.11
MARK3-218ENST00000559274 CEBPAP49715 358 aaPredicted RBP14.34□□□□□ -0.11
MARK3-218ENST00000559274 FAM135AQ9P2D6 1515 aa14.34□□□□□ -0.11
MARK3-218ENST00000559274 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
MARK3-218ENST00000559274 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
MARK3-218ENST00000559274 PREX1Q8TCU6 1659 aa14.3□□□□□ -0.12
MARK3-218ENST00000559274 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
MARK3-218ENST00000559274 HSPA2P54652 639 aa14.29□□□□□ -0.12
MARK3-218ENST00000559274 SIGLEC1Q9BZZ2 1709 aa14.29□□□□□ -0.12
MARK3-218ENST00000559274 ANKRD30AQ9BXX3 1397 aa14.26□□□□□ -0.13
MARK3-218ENST00000559274 PKD2Q13563 968 aa14.26□□□□□ -0.13
MARK3-218ENST00000559274 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
MARK3-218ENST00000559274 KANK1Q14678 1352 aa14.25□□□□□ -0.13
MARK3-218ENST00000559274 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
MARK3-218ENST00000559274 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
MARK3-218ENST00000559274 C3P01024 1663 aa14.24□□□□□ -0.13
MARK3-218ENST00000559274 FBXO41Q8TF61 875 aa14.24□□□□□ -0.13
MARK3-218ENST00000559274 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
MARK3-218ENST00000559274 DUOX2Q9NRD8 1548 aa14.23□□□□□ -0.13
MARK3-218ENST00000559274 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
MARK3-218ENST00000559274 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
MARK3-218ENST00000559274 THEMISQ8N1K5 641 aaPredicted RBP14.22□□□□□ -0.13
MARK3-218ENST00000559274 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
MARK3-218ENST00000559274 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
MARK3-218ENST00000559274 PTPRTO14522 1441 aa14.21□□□□□ -0.13
MARK3-218ENST00000559274 PTPRKQ15262 1439 aa14.21□□□□□ -0.13
MARK3-218ENST00000559274 ERBINQ96RT1 1412 aa14.21□□□□□ -0.13
MARK3-218ENST00000559274 TCOF1Q13428 1488 aaKnown RBP14.2□□□□□ -0.14
MARK3-218ENST00000559274 RRP7BPQ9NSQ0 103 aa14.2□□□□□ -0.14
MARK3-218ENST00000559274 TNRQ92752 1358 aa14.2□□□□□ -0.14
MARK3-218ENST00000559274 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
MARK3-218ENST00000559274 DAPK1P53355 1430 aa14.19□□□□□ -0.14
MARK3-218ENST00000559274 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
MARK3-218ENST00000559274 CLTCQ00610 1675 aaKnown RBP14.19□□□□□ -0.14
MARK3-218ENST00000559274 PZPP20742 1482 aa14.18□□□□□ -0.14
MARK3-218ENST00000559274 ABCC5O15440 1437 aa14.18□□□□□ -0.14
MARK3-218ENST00000559274 CERKQ8TCT0 537 aa14.17□□□□□ -0.14
MARK3-218ENST00000559274 PLA2R1Q13018 1463 aa14.17□□□□□ -0.14
MARK3-218ENST00000559274 NLRP1Q9C000 1473 aa14.17□□□□□ -0.14
MARK3-218ENST00000559274 ANKLE2Q86XL3 938 aa14.16□□□□□ -0.14
MARK3-218ENST00000559274 A2ML1A8K2U0 1454 aa14.16□□□□□ -0.14
MARK3-218ENST00000559274 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
MARK3-218ENST00000559274 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
MARK3-218ENST00000559274 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
MARK3-218ENST00000559274 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
MARK3-218ENST00000559274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.15
MARK3-218ENST00000559274 RNF17Q9BXT8 1623 aaKnown RBP14.13□□□□□ -0.15
MARK3-218ENST00000559274 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
MARK3-218ENST00000559274 CAMSAP1Q5T5Y3 1602 aa14.12□□□□□ -0.15
MARK3-218ENST00000559274 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
MARK3-218ENST00000559274 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
MARK3-218ENST00000559274 CEP170BQ9Y4F5 1589 aaPredicted RBP14.12□□□□□ -0.15
MARK3-218ENST00000559274 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
MARK3-218ENST00000559274 ARHGAP31Q2M1Z3 1444 aa14.11□□□□□ -0.15
MARK3-218ENST00000559274 FBXO31Q5XUX0 539 aaPredicted RBP14.11□□□□□ -0.15
MARK3-218ENST00000559274 EID1Q9Y6B2 187 aa14.1□□□□□ -0.15
MARK3-218ENST00000559274 ADGRL2O95490 1459 aa14.1□□□□□ -0.15
MARK3-218ENST00000559274 ZNF142P52746 1687 aaPredicted RBP14.1□□□□□ -0.15
MARK3-218ENST00000559274 ABCC3O15438 1527 aa14.1□□□□□ -0.15
MARK3-218ENST00000559274 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
MARK3-218ENST00000559274 ANKRD50Q9ULJ7 1429 aa14.09□□□□□ -0.15
MARK3-218ENST00000559274 MYO3AQ8NEV4 1616 aa14.09□□□□□ -0.15
MARK3-218ENST00000559274 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
MARK3-218ENST00000559274 NCKAP5LQ9HCH0 1330 aa14.09□□□□□ -0.15
MARK3-218ENST00000559274 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.16
MARK3-218ENST00000559274 IQSEC2Q5JU85 1478 aa14.07□□□□□ -0.16
MARK3-218ENST00000559274 UGGT1Q9NYU2 1555 aa14.07□□□□□ -0.16
MARK3-218ENST00000559274 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
MARK3-218ENST00000559274 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
MARK3-218ENST00000559274 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
MARK3-218ENST00000559274 ERVK-7P63135 1459 aa14.05□□□□□ -0.16
MARK3-218ENST00000559274 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
MARK3-218ENST00000559274 RPRD2Q5VT52 1461 aaKnown RBP14.03□□□□□ -0.16
MARK3-218ENST00000559274 LMTK2Q8IWU2 1503 aa14.03□□□□□ -0.16
MARK3-218ENST00000559274 ITGAEP38570 1179 aa14.01□□□□□ -0.17
MARK3-218ENST00000559274 DEPDC5O75140 1603 aa14.01□□□□□ -0.17
MARK3-218ENST00000559274 TXNDC2Q86VQ3 553 aa14□□□□□ -0.17
MARK3-218ENST00000559274 TOM1O60784 492 aa13.99□□□□□ -0.17
MARK3-218ENST00000559274 MED14O60244 1454 aa13.99□□□□□ -0.17
MARK3-218ENST00000559274 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
MARK3-218ENST00000559274 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
MARK3-218ENST00000559274 CAPN15O75808 1086 aa13.98□□□□□ -0.17
MARK3-218ENST00000559274 CPS1P31327 1500 aa13.97□□□□□ -0.17
MARK3-218ENST00000559274 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
MARK3-218ENST00000559274 NUP155O75694 1391 aa13.96□□□□□ -0.17
MARK3-218ENST00000559274 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
MARK3-218ENST00000559274 IDI1Q13907 227 aa13.96□□□□□ -0.17
MARK3-218ENST00000559274 CEP152O94986 1710 aa13.95□□□□□ -0.18
MARK3-218ENST00000559274 SCAF11Q99590 1463 aaKnown RBP13.95□□□□□ -0.18
MARK3-218ENST00000559274 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
MARK3-218ENST00000559274 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
MARK3-218ENST00000559274 VWDEQ8N2E2 1590 aa13.95□□□□□ -0.18
MARK3-218ENST00000559274 TMEM2Q9UHN6 1383 aa13.95□□□□□ -0.18
MARK3-218ENST00000559274 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
MARK3-218ENST00000559274 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
MARK3-218ENST00000559274 POLR1AO95602 1720 aaPredicted RBP13.94□□□□□ -0.18
MARK3-218ENST00000559274 BCANQ96GW7 911 aa13.94□□□□□ -0.18
MARK3-218ENST00000559274 EFCAB6Q5THR3 1501 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms