RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 DIP2CQ9Y2E4 1556 aa23.96■■□□□ 1.43
PBX1-215ENST00000559240 DHX29Q7Z478 1369 aaKnown RBP23.93■■□□□ 1.42
PBX1-215ENST00000559240 ZEB1P37275 1124 aaPredicted RBP23.92■■□□□ 1.42
PBX1-215ENST00000559240 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
PBX1-215ENST00000559240 A2MP01023 1474 aa23.9■■□□□ 1.42
PBX1-215ENST00000559240 IQGAP3Q86VI3 1631 aa23.9■■□□□ 1.42
PBX1-215ENST00000559240 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.42
PBX1-215ENST00000559240 ARHGEF40Q8TER5 1519 aa23.88■■□□□ 1.41
PBX1-215ENST00000559240 PZPP20742 1482 aa23.87■■□□□ 1.41
PBX1-215ENST00000559240 VWDEQ8N2E2 1590 aa23.87■■□□□ 1.41
PBX1-215ENST00000559240 ANP32EQ9BTT0 268 aa23.87■■□□□ 1.41
PBX1-215ENST00000559240 PRDM15P57071 1507 aaPredicted RBP23.86■■□□□ 1.41
PBX1-215ENST00000559240 RAPGEF3O95398 923 aa23.86■■□□□ 1.41
PBX1-215ENST00000559240 MROH1Q8NDA8 1641 aa23.84■■□□□ 1.41
PBX1-215ENST00000559240 AGLP35573 1532 aa23.84■■□□□ 1.41
PBX1-215ENST00000559240 CCER1Q8TC90 406 aaPredicted RBP23.84■■□□□ 1.41
PBX1-215ENST00000559240 ATP10AO60312 1499 aa23.82■■□□□ 1.4
PBX1-215ENST00000559240 FAM135AQ9P2D6 1515 aa23.8■■□□□ 1.4
PBX1-215ENST00000559240 YEATS2Q9ULM3 1422 aa23.8■■□□□ 1.4
PBX1-215ENST00000559240 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
PBX1-215ENST00000559240 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
PBX1-215ENST00000559240 MPHOSPH9Q99550 1183 aa23.75■■□□□ 1.39
PBX1-215ENST00000559240 TET3O43151 1660 aa23.75■■□□□ 1.39
PBX1-215ENST00000559240 ZC3H13Q5T200 1668 aaKnown RBP23.75■■□□□ 1.39
PBX1-215ENST00000559240 NUP155O75694 1391 aa23.74■■□□□ 1.39
PBX1-215ENST00000559240 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
PBX1-215ENST00000559240 MYT1LQ9UL68 1186 aa23.69■■□□□ 1.38
PBX1-215ENST00000559240 KANK1Q14678 1352 aa23.68■■□□□ 1.38
PBX1-215ENST00000559240 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
PBX1-215ENST00000559240 ANKRD30BQ9BXX2 1392 aa23.67■■□□□ 1.38
PBX1-215ENST00000559240 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
PBX1-215ENST00000559240 EFCAB6Q5THR3 1501 aa23.65■■□□□ 1.38
PBX1-215ENST00000559240 E9PCH4 1651 aa23.64■■□□□ 1.38
PBX1-215ENST00000559240 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.38
PBX1-215ENST00000559240 KIF3BO15066 747 aa23.64■■□□□ 1.37
PBX1-215ENST00000559240 ABCC3O15438 1527 aa23.63■■□□□ 1.37
PBX1-215ENST00000559240 TIMELESSQ9UNS1 1208 aa23.63■■□□□ 1.37
PBX1-215ENST00000559240 RPRD2Q5VT52 1461 aaKnown RBP23.63■■□□□ 1.37
PBX1-215ENST00000559240 CEP152O94986 1710 aa23.62■■□□□ 1.37
PBX1-215ENST00000559240 CAMSAP1Q5T5Y3 1602 aa23.6■■□□□ 1.37
PBX1-215ENST00000559240 ARHGAP31Q2M1Z3 1444 aa23.59■■□□□ 1.37
PBX1-215ENST00000559240 PKD2Q13563 968 aa23.58■■□□□ 1.37
PBX1-215ENST00000559240 PTPRTO14522 1441 aa23.58■■□□□ 1.36
PBX1-215ENST00000559240 SPHKAPQ2M3C7 1700 aa23.57■■□□□ 1.36
PBX1-215ENST00000559240 TRPM2O94759 1503 aa23.56■■□□□ 1.36
PBX1-215ENST00000559240 NEURL4Q96JN8 1562 aa23.54■■□□□ 1.36
PBX1-215ENST00000559240 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
PBX1-215ENST00000559240 MROH2AA6NES4 1674 aa23.52■■□□□ 1.35
PBX1-215ENST00000559240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
PBX1-215ENST00000559240 NPATQ14207 1427 aa23.46■■□□□ 1.35
PBX1-215ENST00000559240 CLTCQ00610 1675 aaKnown RBP23.45■■□□□ 1.35
PBX1-215ENST00000559240 CNTLNQ9NXG0 1405 aa23.45■■□□□ 1.34
PBX1-215ENST00000559240 NOS1P29475 1434 aa23.44■■□□□ 1.34
PBX1-215ENST00000559240 GGT6Q6P531 493 aa23.44■■□□□ 1.34
PBX1-215ENST00000559240 FOXD1Q16676 465 aa23.44■■□□□ 1.34
PBX1-215ENST00000559240 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
PBX1-215ENST00000559240 WASHC2CQ9Y4E1 1318 aa23.43■■□□□ 1.34
PBX1-215ENST00000559240 PIK3C2BO00750 1634 aa23.43■■□□□ 1.34
PBX1-215ENST00000559240 PREX1Q8TCU6 1659 aa23.42■■□□□ 1.34
PBX1-215ENST00000559240 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
PBX1-215ENST00000559240 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
PBX1-215ENST00000559240 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
PBX1-215ENST00000559240 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
PBX1-215ENST00000559240 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
PBX1-215ENST00000559240 SYNMO15061 1565 aa23.37■■□□□ 1.33
PBX1-215ENST00000559240 FER1L4A9Z1Z3 1794 aa23.36■■□□□ 1.33
PBX1-215ENST00000559240 SPATA31E1Q6ZUB1 1445 aa23.35■■□□□ 1.33
PBX1-215ENST00000559240 KIF1BO60333 1816 aa23.35■■□□□ 1.33
PBX1-215ENST00000559240 ANO8Q9HCE9 1232 aaPredicted RBP23.34■■□□□ 1.33
PBX1-215ENST00000559240 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
PBX1-215ENST00000559240 DIEXFQ68CQ4 756 aaKnown RBP23.34■■□□□ 1.33
PBX1-215ENST00000559240 ADAMTSL3P82987 1691 aa23.34■■□□□ 1.33
PBX1-215ENST00000559240 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
PBX1-215ENST00000559240 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
PBX1-215ENST00000559240 KDM5AP29375 1690 aaKnown RBP23.29■■□□□ 1.32
PBX1-215ENST00000559240 UHRF1BP1Q6BDS2 1440 aa23.29■■□□□ 1.32
PBX1-215ENST00000559240 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
PBX1-215ENST00000559240 STAC3Q96MF2 364 aa23.26■■□□□ 1.31
PBX1-215ENST00000559240 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
PBX1-215ENST00000559240 C3P01024 1663 aa23.26■■□□□ 1.31
PBX1-215ENST00000559240 ARID4BQ4LE39 1312 aaPredicted RBP23.26■■□□□ 1.31
PBX1-215ENST00000559240 UGGT1Q9NYU2 1555 aa23.25■■□□□ 1.31
PBX1-215ENST00000559240 L3MBTL2Q969R5 705 aa23.24■■□□□ 1.31
PBX1-215ENST00000559240 SLC52A1Q9NWF4 448 aa23.24■■□□□ 1.31
PBX1-215ENST00000559240 MADDQ8WXG6 1647 aa23.22■■□□□ 1.31
PBX1-215ENST00000559240 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
PBX1-215ENST00000559240 MYOM2P54296 1465 aa23.2■■□□□ 1.31
PBX1-215ENST00000559240 ESF1Q9H501 851 aaKnown RBP23.2■■□□□ 1.3
PBX1-215ENST00000559240 CFAP65Q6ZU64 1925 aaKnown RBP23.2■■□□□ 1.3
PBX1-215ENST00000559240 MLECQ14165 292 aa23.19■■□□□ 1.3
PBX1-215ENST00000559240 PPLO60437 1756 aa23.18■■□□□ 1.3
PBX1-215ENST00000559240 TSHZ2Q9NRE2 1034 aa23.18■■□□□ 1.3
PBX1-215ENST00000559240 RIMS1Q86UR5 1692 aaKnown RBP23.17■■□□□ 1.3
PBX1-215ENST00000559240 NRXN1Q9ULB1 1477 aa23.16■■□□□ 1.3
PBX1-215ENST00000559240 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
PBX1-215ENST00000559240 KIAA1210Q9ULL0 1709 aa23.16■■□□□ 1.3
PBX1-215ENST00000559240 NLRP1Q9C000 1473 aa23.15■■□□□ 1.3
PBX1-215ENST00000559240 LAMC1P11047 1609 aa23.14■■□□□ 1.3
PBX1-215ENST00000559240 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.29
PBX1-215ENST00000559240 RALGAPBQ86X10 1494 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms