RNA–Protein interactions for RNA: ENST00000559169.1

LINS1-203, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-203ENST00000559169 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
LINS1-203ENST00000559169 CCDC18Q5T9S5 1454 aa9.6□□□□□ -0.87
LINS1-203ENST00000559169 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
LINS1-203ENST00000559169 PTPRGP23470 1445 aa9.6□□□□□ -0.87
LINS1-203ENST00000559169 ATP10BO94823 1461 aa9.59□□□□□ -0.87
LINS1-203ENST00000559169 SETD5Q9C0A6 1442 aa9.59□□□□□ -0.87
LINS1-203ENST00000559169 PSEN1P49768 467 aa9.59□□□□□ -0.87
LINS1-203ENST00000559169 ARHGEF11O15085 1522 aa9.59□□□□□ -0.87
LINS1-203ENST00000559169 MAPKBP1O60336 1514 aa9.59□□□□□ -0.87
LINS1-203ENST00000559169 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
LINS1-203ENST00000559169 EFCAB3Q8N7B9 438 aa9.58□□□□□ -0.88
LINS1-203ENST00000559169 FXR2P51116 673 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINS1-203ENST00000559169 ABCA8O94911 1581 aa9.57□□□□□ -0.88
LINS1-203ENST00000559169 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
LINS1-203ENST00000559169 TRPC6Q9Y210 931 aa9.57□□□□□ -0.88
LINS1-203ENST00000559169 ZNF467Q7Z7K2 595 aaPredicted RBP9.57□□□□□ -0.88
LINS1-203ENST00000559169 HIRIP3Q9BW71 556 aaPredicted RBP9.57□□□□□ -0.88
LINS1-203ENST00000559169 CABP2Q9NPB3 220 aa9.57□□□□□ -0.88
LINS1-203ENST00000559169 PHF8Q9UPP1 1060 aa9.57□□□□□ -0.88
LINS1-203ENST00000559169 PHF12Q96QT6 1004 aa9.55□□□□□ -0.88
LINS1-203ENST00000559169 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
LINS1-203ENST00000559169 TROQ12816 1431 aaPredicted RBP9.54□□□□□ -0.88
LINS1-203ENST00000559169 NAIPQ13075 1403 aa9.54□□□□□ -0.88
LINS1-203ENST00000559169 SHROOM2Q13796 1616 aa9.54□□□□□ -0.88
LINS1-203ENST00000559169 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINS1-203ENST00000559169 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
LINS1-203ENST00000559169 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
LINS1-203ENST00000559169 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
LINS1-203ENST00000559169 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
LINS1-203ENST00000559169 CLASP1Q7Z460 1538 aa9.53□□□□□ -0.88
LINS1-203ENST00000559169 PLEKHD1A6NEE1 506 aa9.53□□□□□ -0.88
LINS1-203ENST00000559169 CDC42BPAQ5VT25 1732 aa9.53□□□□□ -0.88
LINS1-203ENST00000559169 GPATCH8Q9UKJ3 1502 aaKnown RBP9.53□□□□□ -0.88
LINS1-203ENST00000559169 ABCC5O15440 1437 aa9.51□□□□□ -0.89
LINS1-203ENST00000559169 CAMSAP2Q08AD1 1489 aa9.51□□□□□ -0.89
LINS1-203ENST00000559169 UACAQ9BZF9 1416 aa9.51□□□□□ -0.89
LINS1-203ENST00000559169 CDK11AQ9UQ88 783 aaPredicted RBP9.51□□□□□ -0.89
LINS1-203ENST00000559169 TTC37Q6PGP7 1564 aa9.5□□□□□ -0.89
LINS1-203ENST00000559169 MS4A4AQ96JQ5 239 aa9.5□□□□□ -0.89
LINS1-203ENST00000559169 DAPK1P53355 1430 aa9.5□□□□□ -0.89
LINS1-203ENST00000559169 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
LINS1-203ENST00000559169 TCOF1Q13428 1488 aaKnown RBP9.49□□□□□ -0.89
LINS1-203ENST00000559169 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
LINS1-203ENST00000559169 ZNF579Q8NAF0 562 aaKnown RBP9.49□□□□□ -0.89
LINS1-203ENST00000559169 HFM1A2PYH4 1435 aa9.49□□□□□ -0.89
LINS1-203ENST00000559169 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
LINS1-203ENST00000559169 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
LINS1-203ENST00000559169 ABCC10Q5T3U5 1492 aa9.48□□□□□ -0.89
LINS1-203ENST00000559169 ABCC2Q92887 1545 aa9.48□□□□□ -0.89
LINS1-203ENST00000559169 ZCCHC11Q5TAX3 1644 aaKnown RBP9.48□□□□□ -0.89
LINS1-203ENST00000559169 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
LINS1-203ENST00000559169 DNMT1P26358 1616 aaKnown RBP9.46□□□□□ -0.9
LINS1-203ENST00000559169 ADCY10Q96PN6 1610 aa9.46□□□□□ -0.9
LINS1-203ENST00000559169 SEMA3EO15041 775 aa9.46□□□□□ -0.9
LINS1-203ENST00000559169 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.9
LINS1-203ENST00000559169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINS1-203ENST00000559169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINS1-203ENST00000559169 MIA2Q96PC5 1412 aa9.45□□□□□ -0.9
LINS1-203ENST00000559169 ZRANB1Q9UGI0 708 aa9.44□□□□□ -0.9
LINS1-203ENST00000559169 GCC2Q8IWJ2 1684 aa9.44□□□□□ -0.9
LINS1-203ENST00000559169 SAMD9LQ8IVG5 1584 aa9.44□□□□□ -0.9
LINS1-203ENST00000559169 ITSN2Q9NZM3 1697 aa9.44□□□□□ -0.9
LINS1-203ENST00000559169 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
LINS1-203ENST00000559169 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
LINS1-203ENST00000559169 LMOD2Q6P5Q4 547 aa9.43□□□□□ -0.9
LINS1-203ENST00000559169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINS1-203ENST00000559169 SYCP2Q9BX26 1530 aa9.43□□□□□ -0.9
LINS1-203ENST00000559169 MPHOSPH9Q99550 1183 aa9.42□□□□□ -0.9
LINS1-203ENST00000559169 ARHGAP5Q13017 1502 aa9.42□□□□□ -0.9
LINS1-203ENST00000559169 YTHDC1Q96MU7 727 aaKnown RBP9.42□□□□□ -0.9
LINS1-203ENST00000559169 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
LINS1-203ENST00000559169 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
LINS1-203ENST00000559169 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
LINS1-203ENST00000559169 CROCC2H7BZ55 1655 aa9.41□□□□□ -0.9
LINS1-203ENST00000559169 CYB5RLQ6IPT4 315 aa9.4□□□□□ -0.9
LINS1-203ENST00000559169 AKNAQ7Z591 1439 aa9.4□□□□□ -0.9
LINS1-203ENST00000559169 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
LINS1-203ENST00000559169 PREX2Q70Z35 1606 aa9.4□□□□□ -0.91
LINS1-203ENST00000559169 NCOA1Q15788 1441 aa9.4□□□□□ -0.91
LINS1-203ENST00000559169 AFAP1Q8N556 730 aa9.39□□□□□ -0.91
LINS1-203ENST00000559169 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
LINS1-203ENST00000559169 MBD5Q9P267 1494 aa9.38□□□□□ -0.91
LINS1-203ENST00000559169 MYO5CQ9NQX4 1742 aa9.38□□□□□ -0.91
LINS1-203ENST00000559169 ADGBQ8N7X0 1667 aa9.37□□□□□ -0.91
LINS1-203ENST00000559169 KDM5BQ9UGL1 1544 aa9.37□□□□□ -0.91
LINS1-203ENST00000559169 TRAPPC8Q9Y2L5 1435 aa9.37□□□□□ -0.91
LINS1-203ENST00000559169 ZNF326Q5BKZ1 582 aaKnown RBP9.36□□□□□ -0.91
LINS1-203ENST00000559169 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
LINS1-203ENST00000559169 TMEM106CQ9BVX2 250 aa9.36□□□□□ -0.91
LINS1-203ENST00000559169 CLSPNQ9HAW4 1339 aa9.36□□□□□ -0.91
LINS1-203ENST00000559169 TONSLQ96HA7 1378 aa9.36□□□□□ -0.91
LINS1-203ENST00000559169 PAK3O75914 559 aaPredicted RBP9.36□□□□□ -0.91
LINS1-203ENST00000559169 PZPP20742 1482 aa9.36□□□□□ -0.91
LINS1-203ENST00000559169 TSPY4P0CV99 314 aa9.35□□□□□ -0.91
LINS1-203ENST00000559169 TSPY10P0CW01 314 aa9.35□□□□□ -0.91
LINS1-203ENST00000559169 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
LINS1-203ENST00000559169 KIF15Q9NS87 1388 aa9.35□□□□□ -0.91
LINS1-203ENST00000559169 ASXL2Q76L83 1435 aa9.35□□□□□ -0.91
LINS1-203ENST00000559169 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
LINS1-203ENST00000559169 E2F4Q16254 413 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms