RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PANK3Q9H999 370 aa16.07■□□□□ 0.16
SEC11A-206ENST00000558924 RAPGEF6Q8TEU7 1601 aa16.07■□□□□ 0.16
SEC11A-206ENST00000558924 TCOF1Q13428 1488 aaKnown RBP16.07■□□□□ 0.16
SEC11A-206ENST00000558924 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
SEC11A-206ENST00000558924 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
SEC11A-206ENST00000558924 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
SEC11A-206ENST00000558924 KIF14Q15058 1648 aa16.06■□□□□ 0.16
SEC11A-206ENST00000558924 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
SEC11A-206ENST00000558924 GGT6Q6P531 493 aa16.05■□□□□ 0.16
SEC11A-206ENST00000558924 ATP10BO94823 1461 aa16.05■□□□□ 0.16
SEC11A-206ENST00000558924 SAFB2Q14151 953 aaKnown RBP eCLIP16.05■□□□□ 0.16
SEC11A-206ENST00000558924 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
SEC11A-206ENST00000558924 CDCA7LQ96GN5 454 aa16.04■□□□□ 0.16
SEC11A-206ENST00000558924 RGS3P49796 1198 aa16.04■□□□□ 0.16
SEC11A-206ENST00000558924 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
SEC11A-206ENST00000558924 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
SEC11A-206ENST00000558924 KNSTRNQ9Y448 316 aa16.02■□□□□ 0.16
SEC11A-206ENST00000558924 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
SEC11A-206ENST00000558924 SPAG9O60271 1321 aaKnown RBP16.01■□□□□ 0.15
SEC11A-206ENST00000558924 PZPP20742 1482 aa16.01■□□□□ 0.15
SEC11A-206ENST00000558924 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
SEC11A-206ENST00000558924 TMF1P82094 1093 aa16■□□□□ 0.15
SEC11A-206ENST00000558924 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
SEC11A-206ENST00000558924 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
SEC11A-206ENST00000558924 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
SEC11A-206ENST00000558924 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
SEC11A-206ENST00000558924 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
SEC11A-206ENST00000558924 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
SEC11A-206ENST00000558924 KDM5BQ9UGL1 1544 aa15.96■□□□□ 0.15
SEC11A-206ENST00000558924 RCAN3Q9UKA8 241 aa15.96■□□□□ 0.15
SEC11A-206ENST00000558924 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.14
SEC11A-206ENST00000558924 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
SEC11A-206ENST00000558924 NLRP13Q86W25 1043 aa15.94■□□□□ 0.14
SEC11A-206ENST00000558924 PKNOX2Q96KN3 472 aa15.94■□□□□ 0.14
SEC11A-206ENST00000558924 DNMT1P26358 1616 aaKnown RBP15.93■□□□□ 0.14
SEC11A-206ENST00000558924 PDE4AP27815 886 aa15.93■□□□□ 0.14
SEC11A-206ENST00000558924 PLEKHH2Q8IVE3 1493 aa15.93■□□□□ 0.14
SEC11A-206ENST00000558924 RALBP1Q15311 655 aa15.92■□□□□ 0.14
SEC11A-206ENST00000558924 TRAK1Q9UPV9 953 aa15.92■□□□□ 0.14
SEC11A-206ENST00000558924 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
SEC11A-206ENST00000558924 CANXP27824 592 aaKnown RBP15.91■□□□□ 0.14
SEC11A-206ENST00000558924 CFAP70Q5T0N1 1121 aa15.91■□□□□ 0.14
SEC11A-206ENST00000558924 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
SEC11A-206ENST00000558924 STK26Q9P289 416 aa15.9■□□□□ 0.14
SEC11A-206ENST00000558924 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
SEC11A-206ENST00000558924 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
SEC11A-206ENST00000558924 DHX29Q7Z478 1369 aaKnown RBP15.88■□□□□ 0.13
SEC11A-206ENST00000558924 SPRYD3Q8NCJ5 442 aa15.87■□□□□ 0.13
SEC11A-206ENST00000558924 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
SEC11A-206ENST00000558924 RRP1P56182 461 aaKnown RBP15.87■□□□□ 0.13
SEC11A-206ENST00000558924 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
SEC11A-206ENST00000558924 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
SEC11A-206ENST00000558924 RRP7AQ9Y3A4 280 aaKnown RBP15.86■□□□□ 0.13
SEC11A-206ENST00000558924 DISP3Q9P2K9 1392 aa15.85■□□□□ 0.13
SEC11A-206ENST00000558924 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
SEC11A-206ENST00000558924 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
SEC11A-206ENST00000558924 NUP160Q12769 1436 aa15.85■□□□□ 0.13
SEC11A-206ENST00000558924 MLECQ14165 292 aa15.84■□□□□ 0.13
SEC11A-206ENST00000558924 SCAPERQ9BY12 1400 aa15.83■□□□□ 0.13
SEC11A-206ENST00000558924 GSE1Q14687 1217 aa15.83■□□□□ 0.12
SEC11A-206ENST00000558924 WASHC2CQ9Y4E1 1318 aa15.83■□□□□ 0.12
SEC11A-206ENST00000558924 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
SEC11A-206ENST00000558924 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
SEC11A-206ENST00000558924 APAF1O14727 1248 aa15.81■□□□□ 0.12
SEC11A-206ENST00000558924 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
SEC11A-206ENST00000558924 C20orf194Q5TEA3 1177 aa15.8■□□□□ 0.12
SEC11A-206ENST00000558924 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
SEC11A-206ENST00000558924 ITSN2Q9NZM3 1697 aa15.78■□□□□ 0.12
SEC11A-206ENST00000558924 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
SEC11A-206ENST00000558924 KANK1Q14678 1352 aa15.78■□□□□ 0.12
SEC11A-206ENST00000558924 NFKBIBQ15653 356 aa15.78■□□□□ 0.12
SEC11A-206ENST00000558924 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
SEC11A-206ENST00000558924 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
SEC11A-206ENST00000558924 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
SEC11A-206ENST00000558924 TESK2Q96S53 571 aa15.77■□□□□ 0.12
SEC11A-206ENST00000558924 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.11
SEC11A-206ENST00000558924 FAM135AQ9P2D6 1515 aa15.77■□□□□ 0.11
SEC11A-206ENST00000558924 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
SEC11A-206ENST00000558924 ABCC10Q5T3U5 1492 aa15.76■□□□□ 0.11
SEC11A-206ENST00000558924 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
SEC11A-206ENST00000558924 BRD4O60885 1362 aaPredicted RBP15.76■□□□□ 0.11
SEC11A-206ENST00000558924 PPP2R1AP30153 589 aa15.75■□□□□ 0.11
SEC11A-206ENST00000558924 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
SEC11A-206ENST00000558924 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
SEC11A-206ENST00000558924 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
SEC11A-206ENST00000558924 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
SEC11A-206ENST00000558924 ADGRF5Q8IZF2 1346 aa15.74■□□□□ 0.11
SEC11A-206ENST00000558924 SLC12A5Q9H2X9 1139 aa15.74■□□□□ 0.11
SEC11A-206ENST00000558924 ERBINQ96RT1 1412 aa15.74■□□□□ 0.11
SEC11A-206ENST00000558924 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
SEC11A-206ENST00000558924 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
SEC11A-206ENST00000558924 SMG6Q86US8 1419 aaKnown RBP15.74■□□□□ 0.11
SEC11A-206ENST00000558924 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
SEC11A-206ENST00000558924 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
SEC11A-206ENST00000558924 CLUAP1Q96AJ1 413 aa15.73■□□□□ 0.11
SEC11A-206ENST00000558924 RALGAPBQ86X10 1494 aa15.72■□□□□ 0.11
SEC11A-206ENST00000558924 PRAG1Q86YV5 1406 aa15.72■□□□□ 0.11
SEC11A-206ENST00000558924 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
SEC11A-206ENST00000558924 GZF1Q9H116 711 aaPredicted RBP15.72■□□□□ 0.11
SEC11A-206ENST00000558924 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms