RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 KIF3BO15066 747 aa21.52■■□□□ 1.04
VPS18-203ENST00000558855 CEP152O94986 1710 aa21.52■■□□□ 1.03
VPS18-203ENST00000558855 PTPN23Q9H3S7 1636 aa21.51■■□□□ 1.03
VPS18-203ENST00000558855 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
VPS18-203ENST00000558855 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
VPS18-203ENST00000558855 PZPP20742 1482 aa21.48■■□□□ 1.03
VPS18-203ENST00000558855 TCOF1Q13428 1488 aaKnown RBP21.48■■□□□ 1.03
VPS18-203ENST00000558855 FBXO31Q5XUX0 539 aaPredicted RBP21.48■■□□□ 1.03
VPS18-203ENST00000558855 FAM135AQ9P2D6 1515 aa21.48■■□□□ 1.03
VPS18-203ENST00000558855 NCKAP5LQ9HCH0 1330 aa21.48■■□□□ 1.03
VPS18-203ENST00000558855 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
VPS18-203ENST00000558855 A2ML1A8K2U0 1454 aa21.46■■□□□ 1.03
VPS18-203ENST00000558855 PLA2R1Q13018 1463 aa21.46■■□□□ 1.03
VPS18-203ENST00000558855 RSPH4AQ5TD94 716 aa21.46■■□□□ 1.03
VPS18-203ENST00000558855 ABCC3O15438 1527 aa21.45■■□□□ 1.02
VPS18-203ENST00000558855 NEURL4Q96JN8 1562 aa21.45■■□□□ 1.02
VPS18-203ENST00000558855 ZC3H13Q5T200 1668 aaKnown RBP21.45■■□□□ 1.02
VPS18-203ENST00000558855 PPP6R1Q9UPN7 881 aa21.45■■□□□ 1.02
VPS18-203ENST00000558855 DMRT2Q9Y5R5 561 aa21.44■■□□□ 1.02
VPS18-203ENST00000558855 ABCC5O15440 1437 aa21.43■■□□□ 1.02
VPS18-203ENST00000558855 CFAP65Q6ZU64 1925 aaKnown RBP21.43■■□□□ 1.02
VPS18-203ENST00000558855 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
VPS18-203ENST00000558855 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
VPS18-203ENST00000558855 TNRQ92752 1358 aa21.42■■□□□ 1.02
VPS18-203ENST00000558855 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.02
VPS18-203ENST00000558855 SHANK2Q9UPX8 1470 aa21.39■■□□□ 1.02
VPS18-203ENST00000558855 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.02
VPS18-203ENST00000558855 SPATA31D1Q6ZQQ2 1576 aa21.39■■□□□ 1.01
VPS18-203ENST00000558855 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
VPS18-203ENST00000558855 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
VPS18-203ENST00000558855 DAPK1P53355 1430 aa21.38■■□□□ 1.01
VPS18-203ENST00000558855 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
VPS18-203ENST00000558855 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
VPS18-203ENST00000558855 ERVK-7P63135 1459 aa21.34■■□□□ 1.01
VPS18-203ENST00000558855 KIF15Q9NS87 1388 aa21.34■■□□□ 1.01
VPS18-203ENST00000558855 UGGT1Q9NYU2 1555 aa21.32■■□□□ 1
VPS18-203ENST00000558855 UBR1Q8IWV7 1749 aa21.32■■□□□ 1
VPS18-203ENST00000558855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.31■■□□□ 1
VPS18-203ENST00000558855 NLRP1Q9C000 1473 aa21.31■■□□□ 1
VPS18-203ENST00000558855 PKD2Q13563 968 aa21.3■■□□□ 1
VPS18-203ENST00000558855 IQSEC2Q5JU85 1478 aa21.3■■□□□ 1
VPS18-203ENST00000558855 RRP7BPQ9NSQ0 103 aa21.29■■□□□ 1
VPS18-203ENST00000558855 ERBINQ96RT1 1412 aa21.29■■□□□ 1
VPS18-203ENST00000558855 STRCP1A6NGW2 1772 aa21.28■■□□□ 1
VPS18-203ENST00000558855 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
VPS18-203ENST00000558855 APLP2Q06481 763 aa21.27■■□□□ 1
VPS18-203ENST00000558855 IQGAP1P46940 1657 aa21.26■□□□□ 0.99
VPS18-203ENST00000558855 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
VPS18-203ENST00000558855 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
VPS18-203ENST00000558855 ADGRL2O95490 1459 aa21.23■□□□□ 0.99
VPS18-203ENST00000558855 MED14O60244 1454 aa21.22■□□□□ 0.99
VPS18-203ENST00000558855 SYNMO15061 1565 aa21.21■□□□□ 0.99
VPS18-203ENST00000558855 ARHGAP31Q2M1Z3 1444 aa21.21■□□□□ 0.99
VPS18-203ENST00000558855 NPHP4O75161 1426 aaPredicted RBP21.2■□□□□ 0.98
VPS18-203ENST00000558855 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
VPS18-203ENST00000558855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
VPS18-203ENST00000558855 ALKQ9UM73 1620 aa21.18■□□□□ 0.98
VPS18-203ENST00000558855 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
VPS18-203ENST00000558855 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
VPS18-203ENST00000558855 THEMISQ8N1K5 641 aaPredicted RBP21.16■□□□□ 0.98
VPS18-203ENST00000558855 ARHGAP23Q9P227 1491 aa21.15■□□□□ 0.98
VPS18-203ENST00000558855 CPS1P31327 1500 aa21.14■□□□□ 0.98
VPS18-203ENST00000558855 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
VPS18-203ENST00000558855 SLIT1O75093 1534 aa21.14■□□□□ 0.97
VPS18-203ENST00000558855 MYO5BQ9ULV0 1848 aa21.13■□□□□ 0.97
VPS18-203ENST00000558855 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
VPS18-203ENST00000558855 XIRP1Q702N8 1843 aaKnown RBP21.12■□□□□ 0.97
VPS18-203ENST00000558855 UBAP1LF5GYI3 381 aa21.11■□□□□ 0.97
VPS18-203ENST00000558855 UNC13BO14795 1591 aa21.1■□□□□ 0.97
VPS18-203ENST00000558855 KDM5AP29375 1690 aaKnown RBP21.1■□□□□ 0.97
VPS18-203ENST00000558855 SCAF11Q99590 1463 aaKnown RBP21.1■□□□□ 0.97
VPS18-203ENST00000558855 LTKP29376 864 aa21.09■□□□□ 0.97
VPS18-203ENST00000558855 TET3O43151 1660 aa21.09■□□□□ 0.97
VPS18-203ENST00000558855 NOS1P29475 1434 aa21.08■□□□□ 0.97
VPS18-203ENST00000558855 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
VPS18-203ENST00000558855 ANKRD50Q9ULJ7 1429 aa21.07■□□□□ 0.96
VPS18-203ENST00000558855 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
VPS18-203ENST00000558855 KANK1Q14678 1352 aa21.07■□□□□ 0.96
VPS18-203ENST00000558855 LRRC7Q96NW7 1537 aa21.06■□□□□ 0.96
VPS18-203ENST00000558855 E9PCH4 1651 aa21.05■□□□□ 0.96
VPS18-203ENST00000558855 ADGRB3O60242 1522 aa21.05■□□□□ 0.96
VPS18-203ENST00000558855 DISP3Q9P2K9 1392 aa21.02■□□□□ 0.96
VPS18-203ENST00000558855 IDI1Q13907 227 aa21.02■□□□□ 0.96
VPS18-203ENST00000558855 ILDR2Q71H61 639 aa21.02■□□□□ 0.96
VPS18-203ENST00000558855 TMEM2Q9UHN6 1383 aa21.01■□□□□ 0.95
VPS18-203ENST00000558855 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
VPS18-203ENST00000558855 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
VPS18-203ENST00000558855 TMEM131LA2VDJ0 1609 aa20.98■□□□□ 0.95
VPS18-203ENST00000558855 PIP4K2BP78356 416 aa20.97■□□□□ 0.95
VPS18-203ENST00000558855 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
VPS18-203ENST00000558855 ROCK1Q13464 1354 aa20.95■□□□□ 0.94
VPS18-203ENST00000558855 HSPA1LP34931 641 aa20.94■□□□□ 0.94
VPS18-203ENST00000558855 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
VPS18-203ENST00000558855 ITGAEP38570 1179 aa20.92■□□□□ 0.94
VPS18-203ENST00000558855 ZFYVE9O95405 1425 aa20.92■□□□□ 0.94
VPS18-203ENST00000558855 NWD1Q149M9 1564 aa20.91■□□□□ 0.94
VPS18-203ENST00000558855 MED1Q15648 1581 aaPredicted RBP20.9■□□□□ 0.94
VPS18-203ENST00000558855 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
VPS18-203ENST00000558855 TOM1O60784 492 aa20.89■□□□□ 0.93
VPS18-203ENST00000558855 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms