RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 LRRC7Q96NW7 1537 aa6.3□□□□□ -1.4
ZEB1-212ENST00000558655 TCOF1Q13428 1488 aaKnown RBP6.3□□□□□ -1.4
ZEB1-212ENST00000558655 PREX2Q70Z35 1606 aa6.3□□□□□ -1.4
ZEB1-212ENST00000558655 NWD1Q149M9 1564 aa6.3□□□□□ -1.4
ZEB1-212ENST00000558655 ZNF772Q68DY9 489 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-212ENST00000558655 U3KPZ7 1027 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-212ENST00000558655 PLEKHG5O94827 1062 aa6.29□□□□□ -1.4
ZEB1-212ENST00000558655 POTEAQ6S8J7 498 aa6.29□□□□□ -1.4
ZEB1-212ENST00000558655 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
ZEB1-212ENST00000558655 NPM2Q86SE8 214 aaKnown RBP6.29□□□□□ -1.4
ZEB1-212ENST00000558655 PRELPP51888 382 aa6.28□□□□□ -1.4
ZEB1-212ENST00000558655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.28□□□□□ -1.4
ZEB1-212ENST00000558655 AGLP35573 1532 aa6.28□□□□□ -1.4
ZEB1-212ENST00000558655 PPARGC1BQ86YN6 1023 aaKnown RBP6.28□□□□□ -1.4
ZEB1-212ENST00000558655 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
ZEB1-212ENST00000558655 CNTLNQ9NXG0 1405 aa6.27□□□□□ -1.41
ZEB1-212ENST00000558655 RICTORQ6R327 1708 aa6.27□□□□□ -1.41
ZEB1-212ENST00000558655 SETBP1Q9Y6X0 1596 aa6.27□□□□□ -1.41
ZEB1-212ENST00000558655 YY1P25490 414 aa6.27□□□□□ -1.41
ZEB1-212ENST00000558655 TRAPPC8Q9Y2L5 1435 aa6.27□□□□□ -1.41
ZEB1-212ENST00000558655 NCOA2Q15596 1464 aa6.26□□□□□ -1.41
ZEB1-212ENST00000558655 CDK11AQ9UQ88 783 aaPredicted RBP6.26□□□□□ -1.41
ZEB1-212ENST00000558655 FAM135BQ49AJ0 1406 aa6.26□□□□□ -1.41
ZEB1-212ENST00000558655 RNF39Q9H2S5 420 aa6.26□□□□□ -1.41
ZEB1-212ENST00000558655 ATAD2Q6PL18 1390 aa6.25□□□□□ -1.41
ZEB1-212ENST00000558655 SENP3-EIF4A1A0A087X0R7 540 aa6.25□□□□□ -1.41
ZEB1-212ENST00000558655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.25□□□□□ -1.41
ZEB1-212ENST00000558655 CROCC2H7BZ55 1655 aa6.25□□□□□ -1.41
ZEB1-212ENST00000558655 MIA2Q96PC5 1412 aa6.25□□□□□ -1.41
ZEB1-212ENST00000558655 CAMSAP1Q5T5Y3 1602 aa6.25□□□□□ -1.41
ZEB1-212ENST00000558655 ZFYVE16Q7Z3T8 1539 aa6.25□□□□□ -1.41
ZEB1-212ENST00000558655 GPATCH8Q9UKJ3 1502 aaKnown RBP6.24□□□□□ -1.41
ZEB1-212ENST00000558655 MTUS2Q5JR59 1369 aa6.24□□□□□ -1.41
ZEB1-212ENST00000558655 RRBP1Q9P2E9 1410 aaKnown RBP6.24□□□□□ -1.41
ZEB1-212ENST00000558655 TMEM132AQ24JP5 1023 aa6.24□□□□□ -1.41
ZEB1-212ENST00000558655 POLR1AO95602 1720 aaPredicted RBP6.24□□□□□ -1.41
ZEB1-212ENST00000558655 ARHGEF5Q12774 1597 aa6.24□□□□□ -1.41
ZEB1-212ENST00000558655 MYOM3Q5VTT5 1437 aa6.24□□□□□ -1.41
ZEB1-212ENST00000558655 SHANK2Q9UPX8 1470 aa6.24□□□□□ -1.41
ZEB1-212ENST00000558655 PLEKHD1A6NEE1 506 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 PTPN23Q9H3S7 1636 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 FGD6Q6ZV73 1430 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 C1QTNF8P60827 252 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 PLCH2O75038 1416 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 SAMD9LQ8IVG5 1584 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 KANK4Q5T7N3 995 aaPredicted RBP6.23□□□□□ -1.41
ZEB1-212ENST00000558655 C3P01024 1663 aa6.23□□□□□ -1.41
ZEB1-212ENST00000558655 MAST1Q9Y2H9 1570 aa6.22□□□□□ -1.41
ZEB1-212ENST00000558655 C14orf37Q86TY3 774 aa6.22□□□□□ -1.41
ZEB1-212ENST00000558655 ABCC1P33527 1531 aa6.22□□□□□ -1.41
ZEB1-212ENST00000558655 DNMT1P26358 1616 aaKnown RBP6.22□□□□□ -1.41
ZEB1-212ENST00000558655 PLEKHH2Q8IVE3 1493 aa6.22□□□□□ -1.41
ZEB1-212ENST00000558655 ADGBQ8N7X0 1667 aa6.21□□□□□ -1.41
ZEB1-212ENST00000558655 HRCP23327 699 aa6.21□□□□□ -1.42
ZEB1-212ENST00000558655 DEPDC5O75140 1603 aa6.21□□□□□ -1.42
ZEB1-212ENST00000558655 ATF5Q9Y2D1 282 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-212ENST00000558655 KIAA1107Q9UPP5 1409 aa6.2□□□□□ -1.42
ZEB1-212ENST00000558655 SPINK5Q9NQ38 1064 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-212ENST00000558655 SHPRHQ149N8 1683 aa6.2□□□□□ -1.42
ZEB1-212ENST00000558655 UNC13BO14795 1591 aa6.2□□□□□ -1.42
ZEB1-212ENST00000558655 CAMSAP2Q08AD1 1489 aa6.2□□□□□ -1.42
ZEB1-212ENST00000558655 CCNB3Q8WWL7 1395 aa6.19□□□□□ -1.42
ZEB1-212ENST00000558655 C9orf84Q5VXU9 1444 aa6.19□□□□□ -1.42
ZEB1-212ENST00000558655 SPATA31A6Q5VVP1 1343 aa6.19□□□□□ -1.42
ZEB1-212ENST00000558655 VWDEQ8N2E2 1590 aa6.19□□□□□ -1.42
ZEB1-212ENST00000558655 TRIM26Q12899 539 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-212ENST00000558655 ARHGAP5Q13017 1502 aa6.19□□□□□ -1.42
ZEB1-212ENST00000558655 KDM5DQ9BY66 1539 aa6.19□□□□□ -1.42
ZEB1-212ENST00000558655 INO80Q9ULG1 1556 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-212ENST00000558655 SPHKAPQ2M3C7 1700 aa6.18□□□□□ -1.42
ZEB1-212ENST00000558655 PLXNC1O60486 1568 aa6.18□□□□□ -1.42
ZEB1-212ENST00000558655 GCC2Q8IWJ2 1684 aa6.18□□□□□ -1.42
ZEB1-212ENST00000558655 MBD5Q9P267 1494 aa6.18□□□□□ -1.42
ZEB1-212ENST00000558655 ATP1B4Q9UN42 357 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-212ENST00000558655 DENND4BO75064 1496 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-212ENST00000558655 ADGRL2O95490 1459 aa6.17□□□□□ -1.42
ZEB1-212ENST00000558655 SYCP2Q9BX26 1530 aa6.16□□□□□ -1.42
ZEB1-212ENST00000558655 MED14O60244 1454 aa6.16□□□□□ -1.42
ZEB1-212ENST00000558655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-212ENST00000558655 HNRNPUL2Q1KMD3 747 aaKnown RBP6.16□□□□□ -1.42
ZEB1-212ENST00000558655 ATP10AO60312 1499 aa6.16□□□□□ -1.42
ZEB1-212ENST00000558655 ARID3CA6NKF2 412 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 KDM2AQ9Y2K7 1162 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 JCADQ9P266 1359 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 NINLQ9Y2I6 1382 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 CCDC141Q6ZP82 1450 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 ARHGAP23Q9P227 1491 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 KIDINS220Q9ULH0 1771 aa6.15□□□□□ -1.42
ZEB1-212ENST00000558655 ARID4BQ4LE39 1312 aaPredicted RBP6.15□□□□□ -1.42
ZEB1-212ENST00000558655 XIRP1Q702N8 1843 aaKnown RBP6.15□□□□□ -1.43
ZEB1-212ENST00000558655 RTEL1-TNFRSF6BF6WH68 1400 aa6.15□□□□□ -1.43
ZEB1-212ENST00000558655 MYCNP04198 464 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-212ENST00000558655 EFCAB2Q5VUJ9 269 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 EIF2AK4Q9P2K8 1649 aaKnown RBP6.14□□□□□ -1.43
ZEB1-212ENST00000558655 DAPK1P53355 1430 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 ZNF518AQ6AHZ1 1483 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 MLH3Q9UHC1 1453 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 ROCK1Q13464 1354 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 ABCC3O15438 1527 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 RXRBP28702 533 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms