RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 RNF17Q9BXT8 1623 aaKnown RBP23.72■■□□□ 1.39
IDH3A-205ENST00000558509 A2ML1A8K2U0 1454 aa23.71■■□□□ 1.39
IDH3A-205ENST00000558509 KIF3BO15066 747 aa23.71■■□□□ 1.39
IDH3A-205ENST00000558509 POLR1AO95602 1720 aaPredicted RBP23.7■■□□□ 1.39
IDH3A-205ENST00000558509 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.39
IDH3A-205ENST00000558509 FBXO31Q5XUX0 539 aaPredicted RBP23.7■■□□□ 1.38
IDH3A-205ENST00000558509 NEURL4Q96JN8 1562 aa23.69■■□□□ 1.38
IDH3A-205ENST00000558509 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
IDH3A-205ENST00000558509 PZPP20742 1482 aa23.69■■□□□ 1.38
IDH3A-205ENST00000558509 PPP6R1Q9UPN7 881 aa23.68■■□□□ 1.38
IDH3A-205ENST00000558509 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
IDH3A-205ENST00000558509 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
IDH3A-205ENST00000558509 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
IDH3A-205ENST00000558509 CEP152O94986 1710 aa23.66■■□□□ 1.38
IDH3A-205ENST00000558509 EIF2AK4Q9P2K8 1649 aaKnown RBP23.65■■□□□ 1.38
IDH3A-205ENST00000558509 TNRQ92752 1358 aa23.65■■□□□ 1.38
IDH3A-205ENST00000558509 ABCC3O15438 1527 aa23.64■■□□□ 1.38
IDH3A-205ENST00000558509 ZC3H13Q5T200 1668 aaKnown RBP23.63■■□□□ 1.37
IDH3A-205ENST00000558509 IQSEC2Q5JU85 1478 aa23.62■■□□□ 1.37
IDH3A-205ENST00000558509 RSPH4AQ5TD94 716 aa23.62■■□□□ 1.37
IDH3A-205ENST00000558509 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
IDH3A-205ENST00000558509 PTPN23Q9H3S7 1636 aa23.59■■□□□ 1.37
IDH3A-205ENST00000558509 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
IDH3A-205ENST00000558509 PKD2Q13563 968 aa23.58■■□□□ 1.37
IDH3A-205ENST00000558509 CFAP65Q6ZU64 1925 aaKnown RBP23.58■■□□□ 1.37
IDH3A-205ENST00000558509 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
IDH3A-205ENST00000558509 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
IDH3A-205ENST00000558509 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
IDH3A-205ENST00000558509 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
IDH3A-205ENST00000558509 ABCC5O15440 1437 aa23.54■■□□□ 1.36
IDH3A-205ENST00000558509 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
IDH3A-205ENST00000558509 ERVK-7P63135 1459 aa23.53■■□□□ 1.36
IDH3A-205ENST00000558509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
IDH3A-205ENST00000558509 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
IDH3A-205ENST00000558509 NLRP1Q9C000 1473 aa23.52■■□□□ 1.36
IDH3A-205ENST00000558509 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
IDH3A-205ENST00000558509 SHANK2Q9UPX8 1470 aa23.51■■□□□ 1.35
IDH3A-205ENST00000558509 PRDM15P57071 1507 aaPredicted RBP23.51■■□□□ 1.35
IDH3A-205ENST00000558509 DEPDC5O75140 1603 aa23.5■■□□□ 1.35
IDH3A-205ENST00000558509 STRCP1A6NGW2 1772 aa23.5■■□□□ 1.35
IDH3A-205ENST00000558509 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
IDH3A-205ENST00000558509 DAPK1P53355 1430 aa23.48■■□□□ 1.35
IDH3A-205ENST00000558509 FGD6Q6ZV73 1430 aa23.48■■□□□ 1.35
IDH3A-205ENST00000558509 IQGAP1P46940 1657 aa23.48■■□□□ 1.35
IDH3A-205ENST00000558509 KIF15Q9NS87 1388 aa23.47■■□□□ 1.35
IDH3A-205ENST00000558509 MED14O60244 1454 aa23.45■■□□□ 1.34
IDH3A-205ENST00000558509 DISP3Q9P2K9 1392 aa23.43■■□□□ 1.34
IDH3A-205ENST00000558509 NPHP4O75161 1426 aaPredicted RBP23.42■■□□□ 1.34
IDH3A-205ENST00000558509 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
IDH3A-205ENST00000558509 ALKQ9UM73 1620 aa23.42■■□□□ 1.34
IDH3A-205ENST00000558509 UBAP1LF5GYI3 381 aa23.42■■□□□ 1.34
IDH3A-205ENST00000558509 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
IDH3A-205ENST00000558509 CPS1P31327 1500 aa23.41■■□□□ 1.34
IDH3A-205ENST00000558509 RRP7BPQ9NSQ0 103 aa23.4■■□□□ 1.34
IDH3A-205ENST00000558509 PIK3C2BO00750 1634 aa23.39■■□□□ 1.33
IDH3A-205ENST00000558509 ANKLE2Q86XL3 938 aa23.38■■□□□ 1.33
IDH3A-205ENST00000558509 THEMISQ8N1K5 641 aaPredicted RBP23.38■■□□□ 1.33
IDH3A-205ENST00000558509 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
IDH3A-205ENST00000558509 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
IDH3A-205ENST00000558509 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
IDH3A-205ENST00000558509 SYNMO15061 1565 aa23.34■■□□□ 1.33
IDH3A-205ENST00000558509 APLP2Q06481 763 aa23.32■■□□□ 1.32
IDH3A-205ENST00000558509 SLIT1O75093 1534 aa23.32■■□□□ 1.32
IDH3A-205ENST00000558509 LMTK2Q8IWU2 1503 aa23.32■■□□□ 1.32
IDH3A-205ENST00000558509 XIRP1Q702N8 1843 aaKnown RBP23.31■■□□□ 1.32
IDH3A-205ENST00000558509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.327e-8■■■■□ 25
IDH3A-205ENST00000558509 ADGRL2O95490 1459 aa23.3■■□□□ 1.32
IDH3A-205ENST00000558509 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
IDH3A-205ENST00000558509 EFCAB6Q5THR3 1501 aa23.29■■□□□ 1.32
IDH3A-205ENST00000558509 LRRC7Q96NW7 1537 aa23.29■■□□□ 1.32
IDH3A-205ENST00000558509 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
IDH3A-205ENST00000558509 LTKP29376 864 aa23.27■■□□□ 1.32
IDH3A-205ENST00000558509 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
IDH3A-205ENST00000558509 KDM5AP29375 1690 aaKnown RBP23.25■■□□□ 1.31
IDH3A-205ENST00000558509 HSPA1LP34931 641 aa23.24■■□□□ 1.31
IDH3A-205ENST00000558509 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
IDH3A-205ENST00000558509 SCAF1Q9H7N4 1312 aaKnown RBP23.22■■□□□ 1.31
IDH3A-205ENST00000558509 NOS1P29475 1434 aa23.21■■□□□ 1.31
IDH3A-205ENST00000558509 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
IDH3A-205ENST00000558509 KANK1Q14678 1352 aa23.2■■□□□ 1.3
IDH3A-205ENST00000558509 ADGRB3O60242 1522 aa23.19■■□□□ 1.3
IDH3A-205ENST00000558509 TMEM2Q9UHN6 1383 aa23.18■■□□□ 1.3
IDH3A-205ENST00000558509 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
IDH3A-205ENST00000558509 TET3O43151 1660 aa23.18■■□□□ 1.3
IDH3A-205ENST00000558509 UNC13BO14795 1591 aa23.18■■□□□ 1.3
IDH3A-205ENST00000558509 TXNDC2Q86VQ3 553 aa23.17■■□□□ 1.3
IDH3A-205ENST00000558509 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
IDH3A-205ENST00000558509 TOM1O60784 492 aa23.16■■□□□ 1.3
IDH3A-205ENST00000558509 IDI1Q13907 227 aa23.16■■□□□ 1.3
IDH3A-205ENST00000558509 ANKRD50Q9ULJ7 1429 aa23.16■■□□□ 1.3
IDH3A-205ENST00000558509 SOCS7O14512 581 aa23.13■■□□□ 1.29
IDH3A-205ENST00000558509 E9PCH4 1651 aa23.13■■□□□ 1.29
IDH3A-205ENST00000558509 TMEM131LA2VDJ0 1609 aa23.09■■□□□ 1.29
IDH3A-205ENST00000558509 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
IDH3A-205ENST00000558509 RPRD2Q5VT52 1461 aaKnown RBP23.08■■□□□ 1.29
IDH3A-205ENST00000558509 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.28
IDH3A-205ENST00000558509 NWD1Q149M9 1564 aa23.07■■□□□ 1.28
IDH3A-205ENST00000558509 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
IDH3A-205ENST00000558509 EID1Q9Y6B2 187 aa23.06■■□□□ 1.28
IDH3A-205ENST00000558509 ZFYVE9O95405 1425 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms