RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 L3MBTL2Q969R5 705 aa17.33■□□□□ 0.36
SEMA6D-208ENST00000558014 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
SEMA6D-208ENST00000558014 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
SEMA6D-208ENST00000558014 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
SEMA6D-208ENST00000558014 NUTM2AQ8IVF1 878 aaPredicted RBP17.32■□□□□ 0.36
SEMA6D-208ENST00000558014 RAB3GAP2Q9H2M9 1393 aa17.31■□□□□ 0.36
SEMA6D-208ENST00000558014 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
SEMA6D-208ENST00000558014 CCDC18Q5T9S5 1454 aa17.3■□□□□ 0.36
SEMA6D-208ENST00000558014 PDE4CQ08493 712 aa17.3■□□□□ 0.36
SEMA6D-208ENST00000558014 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
SEMA6D-208ENST00000558014 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
SEMA6D-208ENST00000558014 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
SEMA6D-208ENST00000558014 HSP90B1P14625 803 aaKnown RBP17.28■□□□□ 0.36
SEMA6D-208ENST00000558014 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
SEMA6D-208ENST00000558014 TEFQ10587 303 aa17.27■□□□□ 0.36
SEMA6D-208ENST00000558014 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
SEMA6D-208ENST00000558014 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
SEMA6D-208ENST00000558014 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
SEMA6D-208ENST00000558014 ERICH6BQ5W0A0 696 aa17.24■□□□□ 0.35
SEMA6D-208ENST00000558014 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
SEMA6D-208ENST00000558014 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
SEMA6D-208ENST00000558014 PRM3Q9NNZ6 103 aa17.23■□□□□ 0.35
SEMA6D-208ENST00000558014 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEMA6D-208ENST00000558014 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
SEMA6D-208ENST00000558014 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 NLRP2Q9NX02 1062 aa17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
SEMA6D-208ENST00000558014 PANK3Q9H999 370 aa17.21■□□□□ 0.35
SEMA6D-208ENST00000558014 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
SEMA6D-208ENST00000558014 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
SEMA6D-208ENST00000558014 CREBRFQ8IUR6 639 aa17.2■□□□□ 0.34
SEMA6D-208ENST00000558014 GOLGA6L6A8MZA4 724 aa17.2■□□□□ 0.34
SEMA6D-208ENST00000558014 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
SEMA6D-208ENST00000558014 MARCH6O60337 910 aa17.19■□□□□ 0.34
SEMA6D-208ENST00000558014 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
SEMA6D-208ENST00000558014 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
SEMA6D-208ENST00000558014 ESCO1Q5FWF5 840 aa17.19■□□□□ 0.34
SEMA6D-208ENST00000558014 TRIM34Q9BYJ4 488 aa17.19■□□□□ 0.34
SEMA6D-208ENST00000558014 RALBP1Q15311 655 aa17.18■□□□□ 0.34
SEMA6D-208ENST00000558014 LMOD3Q0VAK6 560 aa17.17■□□□□ 0.34
SEMA6D-208ENST00000558014 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
SEMA6D-208ENST00000558014 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
SEMA6D-208ENST00000558014 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
SEMA6D-208ENST00000558014 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
SEMA6D-208ENST00000558014 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
SEMA6D-208ENST00000558014 VPS37DQ86XT2 251 aa17.16■□□□□ 0.34
SEMA6D-208ENST00000558014 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
SEMA6D-208ENST00000558014 MFAP1P55081 439 aaKnown RBP17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 HMMRO75330 724 aa17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 CWC22Q9HCG8 908 aaKnown RBP17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 CTDP1Q9Y5B0 961 aaPredicted RBP17.15■□□□□ 0.34
SEMA6D-208ENST00000558014 AFAP1Q8N556 730 aa17.14■□□□□ 0.33
SEMA6D-208ENST00000558014 TXNDC2Q86VQ3 553 aa17.14■□□□□ 0.33
SEMA6D-208ENST00000558014 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
SEMA6D-208ENST00000558014 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
SEMA6D-208ENST00000558014 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
SEMA6D-208ENST00000558014 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
SEMA6D-208ENST00000558014 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
SEMA6D-208ENST00000558014 HMOX1P09601 288 aa17.12■□□□□ 0.33
SEMA6D-208ENST00000558014 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
SEMA6D-208ENST00000558014 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
SEMA6D-208ENST00000558014 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
SEMA6D-208ENST00000558014 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
SEMA6D-208ENST00000558014 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
SEMA6D-208ENST00000558014 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
SEMA6D-208ENST00000558014 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
SEMA6D-208ENST00000558014 FOXD4L5Q5VV16 416 aaPredicted RBP17.11■□□□□ 0.33
SEMA6D-208ENST00000558014 FOXD4L4Q8WXT5 416 aaPredicted RBP17.11■□□□□ 0.33
SEMA6D-208ENST00000558014 NLRP6P59044 892 aa17.1■□□□□ 0.33
SEMA6D-208ENST00000558014 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
SEMA6D-208ENST00000558014 NOL10Q9BSC4 688 aaKnown RBP17.1■□□□□ 0.33
SEMA6D-208ENST00000558014 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
SEMA6D-208ENST00000558014 RBM33Q96EV2 1170 aaKnown RBP17.09■□□□□ 0.33
SEMA6D-208ENST00000558014 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
SEMA6D-208ENST00000558014 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
SEMA6D-208ENST00000558014 NRDCO43847 1150 aa17.08■□□□□ 0.33
SEMA6D-208ENST00000558014 UACAQ9BZF9 1416 aa17.08■□□□□ 0.32
SEMA6D-208ENST00000558014 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
SEMA6D-208ENST00000558014 ABTB2Q8N961 1025 aa17.08■□□□□ 0.32
SEMA6D-208ENST00000558014 PLIN1O60240 522 aa17.07■□□□□ 0.32
SEMA6D-208ENST00000558014 APPP05067 770 aa17.07■□□□□ 0.32
SEMA6D-208ENST00000558014 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
SEMA6D-208ENST00000558014 FYB1O15117 783 aa17.07■□□□□ 0.32
SEMA6D-208ENST00000558014 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
SEMA6D-208ENST00000558014 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
SEMA6D-208ENST00000558014 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
SEMA6D-208ENST00000558014 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
SEMA6D-208ENST00000558014 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
SEMA6D-208ENST00000558014 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
SEMA6D-208ENST00000558014 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
SEMA6D-208ENST00000558014 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
SEMA6D-208ENST00000558014 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
SEMA6D-208ENST00000558014 GZF1Q9H116 711 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms