RNA–Protein interactions for RNA: ENST00000557920.1

KNSTRN-204, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-204ENST00000557920 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
KNSTRN-204ENST00000557920 ATP10AO60312 1499 aa17.28■□□□□ 0.36
KNSTRN-204ENST00000557920 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
KNSTRN-204ENST00000557920 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
KNSTRN-204ENST00000557920 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
KNSTRN-204ENST00000557920 FBLN2P98095 1184 aa17.27■□□□□ 0.36
KNSTRN-204ENST00000557920 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
KNSTRN-204ENST00000557920 STAC3Q96MF2 364 aa17.27■□□□□ 0.36
KNSTRN-204ENST00000557920 SAMD9LQ8IVG5 1584 aa17.27■□□□□ 0.35
KNSTRN-204ENST00000557920 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
KNSTRN-204ENST00000557920 EIF2AK4Q9P2K8 1649 aaKnown RBP17.25■□□□□ 0.35
KNSTRN-204ENST00000557920 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
KNSTRN-204ENST00000557920 E9PCH4 1651 aa17.25■□□□□ 0.35
KNSTRN-204ENST00000557920 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
KNSTRN-204ENST00000557920 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
KNSTRN-204ENST00000557920 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
KNSTRN-204ENST00000557920 IQGAP3Q86VI3 1631 aa17.22■□□□□ 0.35
KNSTRN-204ENST00000557920 CDC42BPBQ9Y5S2 1711 aa17.22■□□□□ 0.35
KNSTRN-204ENST00000557920 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
KNSTRN-204ENST00000557920 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.35
KNSTRN-204ENST00000557920 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
KNSTRN-204ENST00000557920 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
KNSTRN-204ENST00000557920 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.34
KNSTRN-204ENST00000557920 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
KNSTRN-204ENST00000557920 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
KNSTRN-204ENST00000557920 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
KNSTRN-204ENST00000557920 ABCC2Q92887 1545 aa17.18■□□□□ 0.34
KNSTRN-204ENST00000557920 ST20-MTHFSA0A0A6YYL1 179 aa17.18■□□□□ 0.34
KNSTRN-204ENST00000557920 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
KNSTRN-204ENST00000557920 PRDM15P57071 1507 aaPredicted RBP17.16■□□□□ 0.34
KNSTRN-204ENST00000557920 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
KNSTRN-204ENST00000557920 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
KNSTRN-204ENST00000557920 ERICH6Q7L0X2 663 aa17.16■□□□□ 0.34
KNSTRN-204ENST00000557920 UHRF1BP1LA0JNW5 1464 aa17.16■□□□□ 0.34
KNSTRN-204ENST00000557920 COL17A1Q9UMD9 1497 aaPredicted RBP17.15■□□□□ 0.34
KNSTRN-204ENST00000557920 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
KNSTRN-204ENST00000557920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.347e-7■■□□□ 13.6
KNSTRN-204ENST00000557920 ARAP3Q8WWN8 1544 aa17.15■□□□□ 0.34
KNSTRN-204ENST00000557920 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
KNSTRN-204ENST00000557920 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
KNSTRN-204ENST00000557920 PLCH2O75038 1416 aa17.13■□□□□ 0.33
KNSTRN-204ENST00000557920 RTEL1-TNFRSF6BF6WH68 1400 aa17.12■□□□□ 0.33
KNSTRN-204ENST00000557920 A2MP01023 1474 aa17.12■□□□□ 0.33
KNSTRN-204ENST00000557920 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
KNSTRN-204ENST00000557920 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
KNSTRN-204ENST00000557920 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
KNSTRN-204ENST00000557920 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
KNSTRN-204ENST00000557920 KDM2AQ9Y2K7 1162 aa17.1■□□□□ 0.33
KNSTRN-204ENST00000557920 TMF1P82094 1093 aa17.09■□□□□ 0.33
KNSTRN-204ENST00000557920 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
KNSTRN-204ENST00000557920 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
KNSTRN-204ENST00000557920 TTC37Q6PGP7 1564 aa17.09■□□□□ 0.33
KNSTRN-204ENST00000557920 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
KNSTRN-204ENST00000557920 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
KNSTRN-204ENST00000557920 MSH5O43196 834 aa17.08■□□□□ 0.32
KNSTRN-204ENST00000557920 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-204ENST00000557920 CHD1O14646 1710 aa17.05■□□□□ 0.32
KNSTRN-204ENST00000557920 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
KNSTRN-204ENST00000557920 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
KNSTRN-204ENST00000557920 TESK2Q96S53 571 aa17.04■□□□□ 0.32
KNSTRN-204ENST00000557920 ABCC1P33527 1531 aa17.04■□□□□ 0.32
KNSTRN-204ENST00000557920 RRP1P56182 461 aaKnown RBP17.03■□□□□ 0.32
KNSTRN-204ENST00000557920 WDR7Q9Y4E6 1490 aa17.03■□□□□ 0.32
KNSTRN-204ENST00000557920 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
KNSTRN-204ENST00000557920 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
KNSTRN-204ENST00000557920 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
KNSTRN-204ENST00000557920 MS4A1P11836 297 aa17.01■□□□□ 0.31
KNSTRN-204ENST00000557920 PTPRTO14522 1441 aa17.01■□□□□ 0.31
KNSTRN-204ENST00000557920 TRPM2O94759 1503 aa17.01■□□□□ 0.31
KNSTRN-204ENST00000557920 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
KNSTRN-204ENST00000557920 KIAA1210Q9ULL0 1709 aa16.98■□□□□ 0.31
KNSTRN-204ENST00000557920 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
KNSTRN-204ENST00000557920 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-204ENST00000557920 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
KNSTRN-204ENST00000557920 SYNMO15061 1565 aa16.95■□□□□ 0.3
KNSTRN-204ENST00000557920 KANK1Q14678 1352 aa16.95■□□□□ 0.3
KNSTRN-204ENST00000557920 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
KNSTRN-204ENST00000557920 DISP3Q9P2K9 1392 aa16.94■□□□□ 0.3
KNSTRN-204ENST00000557920 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
KNSTRN-204ENST00000557920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■□□□ 12.2
KNSTRN-204ENST00000557920 PANK3Q9H999 370 aa16.94■□□□□ 0.3
KNSTRN-204ENST00000557920 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
KNSTRN-204ENST00000557920 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
KNSTRN-204ENST00000557920 TET3O43151 1660 aa16.93■□□□□ 0.3
KNSTRN-204ENST00000557920 VWDEQ8N2E2 1590 aa16.93■□□□□ 0.3
KNSTRN-204ENST00000557920 CEP152O94986 1710 aa16.93■□□□□ 0.3
KNSTRN-204ENST00000557920 SPHKAPQ2M3C7 1700 aa16.93■□□□□ 0.3
KNSTRN-204ENST00000557920 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
KNSTRN-204ENST00000557920 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
KNSTRN-204ENST00000557920 KNSTRNQ9Y448 316 aa16.9■□□□□ 0.3
KNSTRN-204ENST00000557920 TRAPPC8Q9Y2L5 1435 aa16.89■□□□□ 0.29
KNSTRN-204ENST00000557920 MYOM2P54296 1465 aa16.89■□□□□ 0.29
KNSTRN-204ENST00000557920 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
KNSTRN-204ENST00000557920 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms