RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
PNN-206ENST00000557680 DPYSL4O14531 572 aa9.66□□□□□ -0.86
PNN-206ENST00000557680 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
PNN-206ENST00000557680 MRPL50Q8N5N7 158 aaKnown RBP9.66□□□□□ -0.86
PNN-206ENST00000557680 PPP1R3GB7ZBB8 358 aa9.65□□□□□ -0.86
PNN-206ENST00000557680 PHF14O94880 888 aa9.65□□□□□ -0.86
PNN-206ENST00000557680 PTPN5P54829 565 aa9.65□□□□□ -0.86
PNN-206ENST00000557680 TYW1BQ6NUM6 668 aa9.65□□□□□ -0.86
PNN-206ENST00000557680 FBXW7Q969H0 707 aa9.64□□□□□ -0.87
PNN-206ENST00000557680 NBPF3Q9H094 633 aa9.64□□□□□ -0.87
PNN-206ENST00000557680 SPRYD3Q8NCJ5 442 aa9.63□□□□□ -0.87
PNN-206ENST00000557680 TPRNQ4KMQ1 711 aa9.62□□□□□ -0.87
PNN-206ENST00000557680 WNT2BQ93097 391 aa9.62□□□□□ -0.87
PNN-206ENST00000557680 COL9A1P20849 921 aa9.61□□□□□ -0.87
PNN-206ENST00000557680 PROX2Q3B8N5 592 aa9.61□□□□□ -0.87
PNN-206ENST00000557680 THSD4Q6ZMP0 1018 aa9.61□□□□□ -0.87
PNN-206ENST00000557680 EPAS1Q99814 870 aa9.59□□□□□ -0.87
PNN-206ENST00000557680 RABGEF1Q9UJ41 708 aa9.59□□□□□ -0.87
PNN-206ENST00000557680 DDX12PQ92771 950 aa9.57□□□□□ -0.88
PNN-206ENST00000557680 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
PNN-206ENST00000557680 C6orf132Q5T0Z8 1188 aa9.56□□□□□ -0.88
PNN-206ENST00000557680 PDIA6Q15084 440 aa9.53□□□□□ -0.88
PNN-206ENST00000557680 ANKK1Q8NFD2 765 aa9.53□□□□□ -0.88
PNN-206ENST00000557680 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
PNN-206ENST00000557680 NBR1Q14596 966 aa9.52□□□□□ -0.89
PNN-206ENST00000557680 E2F4Q16254 413 aa9.51□□□□□ -0.89
PNN-206ENST00000557680 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
PNN-206ENST00000557680 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
PNN-206ENST00000557680 LAPTM4BQ86VI4 370 aa9.5□□□□□ -0.89
PNN-206ENST00000557680 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
PNN-206ENST00000557680 TRIM6-TRIM34B2RNG4 842 aa9.49□□□□□ -0.89
PNN-206ENST00000557680 MAP3K7O43318 606 aa9.49□□□□□ -0.89
PNN-206ENST00000557680 BCAMP50895 628 aa9.49□□□□□ -0.89
PNN-206ENST00000557680 EN1Q05925 392 aaPredicted RBP9.49□□□□□ -0.89
PNN-206ENST00000557680 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
PNN-206ENST00000557680 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
PNN-206ENST00000557680 TSR1Q2NL82 804 aaKnown RBP9.47□□□□□ -0.89
PNN-206ENST00000557680 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
PNN-206ENST00000557680 SOWAHBA6NEL2 793 aa9.46□□□□□ -0.9
PNN-206ENST00000557680 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
PNN-206ENST00000557680 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
PNN-206ENST00000557680 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
PNN-206ENST00000557680 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
PNN-206ENST00000557680 A0A0G2JS52 829 aa9.42□□□□□ -0.9
PNN-206ENST00000557680 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
PNN-206ENST00000557680 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
PNN-206ENST00000557680 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
PNN-206ENST00000557680 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
PNN-206ENST00000557680 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
PNN-206ENST00000557680 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
PNN-206ENST00000557680 ITGBL1O95965 494 aaPredicted RBP9.39□□□□□ -0.91
PNN-206ENST00000557680 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
PNN-206ENST00000557680 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
PNN-206ENST00000557680 RGS20O76081 388 aa9.38□□□□□ -0.91
PNN-206ENST00000557680 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
PNN-206ENST00000557680 PRSS12P56730 875 aa9.37□□□□□ -0.91
PNN-206ENST00000557680 CERKQ8TCT0 537 aa9.37□□□□□ -0.91
PNN-206ENST00000557680 SMAPO00193 183 aa9.36□□□□□ -0.91
PNN-206ENST00000557680 OSBPP22059 807 aa9.36□□□□□ -0.91
PNN-206ENST00000557680 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
PNN-206ENST00000557680 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
PNN-206ENST00000557680 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
PNN-206ENST00000557680 KCNC4Q03721 635 aa9.33□□□□□ -0.92
PNN-206ENST00000557680 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
PNN-206ENST00000557680 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
PNN-206ENST00000557680 TATDN2Q93075 761 aa9.32□□□□□ -0.92
PNN-206ENST00000557680 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
PNN-206ENST00000557680 PPP4CP60510 307 aa9.31□□□□□ -0.92
PNN-206ENST00000557680 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
PNN-206ENST00000557680 NUDT18Q6ZVK8 323 aa9.28□□□□□ -0.92
PNN-206ENST00000557680 IRX2Q9BZI1 471 aaPredicted RBP9.28□□□□□ -0.92
PNN-206ENST00000557680 RNF40O75150 1001 aa9.26□□□□□ -0.93
PNN-206ENST00000557680 PADI6Q6TGC4 694 aa9.26□□□□□ -0.93
PNN-206ENST00000557680 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
PNN-206ENST00000557680 HDGFP51858 240 aaKnown RBP9.25□□□□□ -0.93
PNN-206ENST00000557680 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
PNN-206ENST00000557680 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
PNN-206ENST00000557680 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
PNN-206ENST00000557680 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
PNN-206ENST00000557680 TJAP1Q5JTD0 557 aa9.21□□□□□ -0.94
PNN-206ENST00000557680 MTRQ99707 1265 aa9.21□□□□□ -0.94
PNN-206ENST00000557680 SWT1Q5T5J6 900 aaKnown RBP9.2□□□□□ -0.94
PNN-206ENST00000557680 IL21Q9HBE4 155 aa9.19□□□□□ -0.94
PNN-206ENST00000557680 APLP1P51693 650 aa9.18□□□□□ -0.94
PNN-206ENST00000557680 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
PNN-206ENST00000557680 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
PNN-206ENST00000557680 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
PNN-206ENST00000557680 EYA1Q99502 592 aa9.16□□□□□ -0.94
PNN-206ENST00000557680 PTGDRQ13258 359 aa9.15□□□□□ -0.94
PNN-206ENST00000557680 P3H3Q8IVL6 736 aa9.15□□□□□ -0.94
PNN-206ENST00000557680 ZNF516Q92618 1163 aa9.15□□□□□ -0.94
PNN-206ENST00000557680 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
PNN-206ENST00000557680 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
PNN-206ENST00000557680 COPS2P61201 443 aa9.12□□□□□ -0.95
PNN-206ENST00000557680 PPP1R18Q6NYC8 613 aa9.12□□□□□ -0.95
PNN-206ENST00000557680 Q6ZNB5 142 aa9.11□□□□□ -0.95
PNN-206ENST00000557680 TULP1O00294 542 aaPredicted RBP9.1□□□□□ -0.95
PNN-206ENST00000557680 SEMA3EO15041 775 aa9.1□□□□□ -0.95
PNN-206ENST00000557680 DNAJB2P25686 324 aa9.1□□□□□ -0.95
PNN-206ENST00000557680 RBM46Q8TBY0 533 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms