RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PBX2P40425 430 aa12.62□□□□□ -0.39
GPHN-215ENST00000557654 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
GPHN-215ENST00000557654 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
GPHN-215ENST00000557654 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
GPHN-215ENST00000557654 MAP3K7O43318 606 aa12.61□□□□□ -0.39
GPHN-215ENST00000557654 PTPREP23469 700 aa12.6□□□□□ -0.39
GPHN-215ENST00000557654 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
GPHN-215ENST00000557654 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
GPHN-215ENST00000557654 COL9A1P20849 921 aa12.58□□□□□ -0.4
GPHN-215ENST00000557654 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
GPHN-215ENST00000557654 CDHR5Q9HBB8 845 aa12.58□□□□□ -0.4
GPHN-215ENST00000557654 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
GPHN-215ENST00000557654 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
GPHN-215ENST00000557654 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
GPHN-215ENST00000557654 PROX2Q3B8N5 592 aa12.51□□□□□ -0.41
GPHN-215ENST00000557654 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
GPHN-215ENST00000557654 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
GPHN-215ENST00000557654 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
GPHN-215ENST00000557654 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
GPHN-215ENST00000557654 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
GPHN-215ENST00000557654 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
GPHN-215ENST00000557654 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
GPHN-215ENST00000557654 TK2O00142 265 aa12.44□□□□□ -0.42
GPHN-215ENST00000557654 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
GPHN-215ENST00000557654 HRO43593 1189 aa12.42□□□□□ -0.42
GPHN-215ENST00000557654 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
GPHN-215ENST00000557654 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
GPHN-215ENST00000557654 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
GPHN-215ENST00000557654 PTGDRQ13258 359 aa12.4□□□□□ -0.42
GPHN-215ENST00000557654 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
GPHN-215ENST00000557654 PRSS12P56730 875 aa12.39□□□□□ -0.43
GPHN-215ENST00000557654 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
GPHN-215ENST00000557654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
GPHN-215ENST00000557654 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
GPHN-215ENST00000557654 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
GPHN-215ENST00000557654 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
GPHN-215ENST00000557654 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
GPHN-215ENST00000557654 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
GPHN-215ENST00000557654 GPR37O15354 613 aa12.37□□□□□ -0.43
GPHN-215ENST00000557654 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
GPHN-215ENST00000557654 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
GPHN-215ENST00000557654 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
GPHN-215ENST00000557654 FCHSD2O94868 740 aa12.35□□□□□ -0.43
GPHN-215ENST00000557654 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
GPHN-215ENST00000557654 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
GPHN-215ENST00000557654 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
GPHN-215ENST00000557654 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
GPHN-215ENST00000557654 SMAPO00193 183 aa12.33□□□□□ -0.44
GPHN-215ENST00000557654 FECHP22830 423 aa12.33□□□□□ -0.44
GPHN-215ENST00000557654 BCANQ96GW7 911 aa12.33□□□□□ -0.44
GPHN-215ENST00000557654 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
GPHN-215ENST00000557654 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
GPHN-215ENST00000557654 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
GPHN-215ENST00000557654 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
GPHN-215ENST00000557654 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
GPHN-215ENST00000557654 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
GPHN-215ENST00000557654 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
GPHN-215ENST00000557654 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
GPHN-215ENST00000557654 HIC1Q14526 733 aa12.29□□□□□ -0.44
GPHN-215ENST00000557654 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
GPHN-215ENST00000557654 NUDT18Q6ZVK8 323 aa12.28□□□□□ -0.44
GPHN-215ENST00000557654 GNPATO15228 680 aa12.27□□□□□ -0.45
GPHN-215ENST00000557654 TATDN2Q93075 761 aa12.27□□□□□ -0.45
GPHN-215ENST00000557654 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
GPHN-215ENST00000557654 NBPF26B4DH59 902 aa12.25□□□□□ -0.45
GPHN-215ENST00000557654 KCTD12Q96CX2 325 aaKnown RBP12.25□□□□□ -0.45
GPHN-215ENST00000557654 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
GPHN-215ENST00000557654 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
GPHN-215ENST00000557654 ZFRQ96KR1 1074 aaKnown RBP12.22□□□□□ -0.45
GPHN-215ENST00000557654 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
GPHN-215ENST00000557654 LAPTM4BQ86VI4 370 aa12.21□□□□□ -0.45
GPHN-215ENST00000557654 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
GPHN-215ENST00000557654 WNT2BQ93097 391 aa12.2□□□□□ -0.46
GPHN-215ENST00000557654 EYA1Q99502 592 aa12.2□□□□□ -0.46
GPHN-215ENST00000557654 BCAMP50895 628 aa12.17□□□□□ -0.46
GPHN-215ENST00000557654 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
GPHN-215ENST00000557654 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
GPHN-215ENST00000557654 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
GPHN-215ENST00000557654 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
GPHN-215ENST00000557654 PTPN5P54829 565 aa12.14□□□□□ -0.47
GPHN-215ENST00000557654 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
GPHN-215ENST00000557654 ZMYND10O75800 440 aa12.13□□□□□ -0.47
GPHN-215ENST00000557654 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
GPHN-215ENST00000557654 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
GPHN-215ENST00000557654 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
GPHN-215ENST00000557654 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
GPHN-215ENST00000557654 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
GPHN-215ENST00000557654 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
GPHN-215ENST00000557654 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
GPHN-215ENST00000557654 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
GPHN-215ENST00000557654 IRF6O14896 467 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 OATP04181 439 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 LRCH3Q96II8 777 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 DNAJB2P25686 324 aa12.09□□□□□ -0.47
GPHN-215ENST00000557654 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
GPHN-215ENST00000557654 RNF40O75150 1001 aa12.08□□□□□ -0.48
GPHN-215ENST00000557654 KRI1Q8N9T8 703 aaKnown RBP12.08□□□□□ -0.48
GPHN-215ENST00000557654 MINK1Q8N4C8 1332 aaPredicted RBP12.08□□□□□ -0.48
GPHN-215ENST00000557654 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms