RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PBX2P40425 430 aa12.62□□□□□ -0.39
GPHN-215ENST00000557654 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
GPHN-215ENST00000557654 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
GPHN-215ENST00000557654 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
GPHN-215ENST00000557654 MAP3K7O43318 606 aa12.61□□□□□ -0.39
GPHN-215ENST00000557654 PTPREP23469 700 aa12.6□□□□□ -0.39
GPHN-215ENST00000557654 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
GPHN-215ENST00000557654 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
GPHN-215ENST00000557654 COL9A1P20849 921 aa12.58□□□□□ -0.4
GPHN-215ENST00000557654 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
GPHN-215ENST00000557654 CDHR5Q9HBB8 845 aa12.58□□□□□ -0.4
GPHN-215ENST00000557654 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
GPHN-215ENST00000557654 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
GPHN-215ENST00000557654 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
GPHN-215ENST00000557654 PROX2Q3B8N5 592 aa12.51□□□□□ -0.41
GPHN-215ENST00000557654 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
GPHN-215ENST00000557654 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
GPHN-215ENST00000557654 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
GPHN-215ENST00000557654 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
GPHN-215ENST00000557654 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
GPHN-215ENST00000557654 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
GPHN-215ENST00000557654 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
GPHN-215ENST00000557654 TK2O00142 265 aa12.44□□□□□ -0.42
GPHN-215ENST00000557654 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
GPHN-215ENST00000557654 HRO43593 1189 aa12.42□□□□□ -0.42
GPHN-215ENST00000557654 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
GPHN-215ENST00000557654 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
GPHN-215ENST00000557654 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
GPHN-215ENST00000557654 PTGDRQ13258 359 aa12.4□□□□□ -0.42
GPHN-215ENST00000557654 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
GPHN-215ENST00000557654 PRSS12P56730 875 aa12.39□□□□□ -0.43
GPHN-215ENST00000557654 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
GPHN-215ENST00000557654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
GPHN-215ENST00000557654 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
GPHN-215ENST00000557654 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
GPHN-215ENST00000557654 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
GPHN-215ENST00000557654 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
GPHN-215ENST00000557654 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
GPHN-215ENST00000557654 GPR37O15354 613 aa12.37□□□□□ -0.43
GPHN-215ENST00000557654 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
GPHN-215ENST00000557654 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
GPHN-215ENST00000557654 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
GPHN-215ENST00000557654 FCHSD2O94868 740 aa12.35□□□□□ -0.43
GPHN-215ENST00000557654 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
GPHN-215ENST00000557654 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
GPHN-215ENST00000557654 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
GPHN-215ENST00000557654 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
GPHN-215ENST00000557654 SMAPO00193 183 aa12.33□□□□□ -0.44
GPHN-215ENST00000557654 FECHP22830 423 aa12.33□□□□□ -0.44
GPHN-215ENST00000557654 BCANQ96GW7 911 aa12.33□□□□□ -0.44
GPHN-215ENST00000557654 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
GPHN-215ENST00000557654 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
GPHN-215ENST00000557654 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
GPHN-215ENST00000557654 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
GPHN-215ENST00000557654 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
GPHN-215ENST00000557654 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
GPHN-215ENST00000557654 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
GPHN-215ENST00000557654 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
GPHN-215ENST00000557654 HIC1Q14526 733 aa12.29□□□□□ -0.44
GPHN-215ENST00000557654 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
GPHN-215ENST00000557654 NUDT18Q6ZVK8 323 aa12.28□□□□□ -0.44
GPHN-215ENST00000557654 GNPATO15228 680 aa12.27□□□□□ -0.45
GPHN-215ENST00000557654 TATDN2Q93075 761 aa12.27□□□□□ -0.45
GPHN-215ENST00000557654 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
GPHN-215ENST00000557654 NBPF26B4DH59 902 aa12.25□□□□□ -0.45
GPHN-215ENST00000557654 KCTD12Q96CX2 325 aaKnown RBP12.25□□□□□ -0.45
GPHN-215ENST00000557654 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
GPHN-215ENST00000557654 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
GPHN-215ENST00000557654 ZFRQ96KR1 1074 aaKnown RBP12.22□□□□□ -0.45
GPHN-215ENST00000557654 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
GPHN-215ENST00000557654 LAPTM4BQ86VI4 370 aa12.21□□□□□ -0.45
GPHN-215ENST00000557654 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
GPHN-215ENST00000557654 WNT2BQ93097 391 aa12.2□□□□□ -0.46
GPHN-215ENST00000557654 EYA1Q99502 592 aa12.2□□□□□ -0.46
GPHN-215ENST00000557654 BCAMP50895 628 aa12.17□□□□□ -0.46
GPHN-215ENST00000557654 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
GPHN-215ENST00000557654 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
GPHN-215ENST00000557654 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
GPHN-215ENST00000557654 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
GPHN-215ENST00000557654 PTPN5P54829 565 aa12.14□□□□□ -0.47
GPHN-215ENST00000557654 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
GPHN-215ENST00000557654 ZMYND10O75800 440 aa12.13□□□□□ -0.47
GPHN-215ENST00000557654 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
GPHN-215ENST00000557654 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
GPHN-215ENST00000557654 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
GPHN-215ENST00000557654 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
GPHN-215ENST00000557654 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
GPHN-215ENST00000557654 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
GPHN-215ENST00000557654 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
GPHN-215ENST00000557654 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
GPHN-215ENST00000557654 IRF6O14896 467 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 OATP04181 439 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 LRCH3Q96II8 777 aa12.1□□□□□ -0.47
GPHN-215ENST00000557654 DNAJB2P25686 324 aa12.09□□□□□ -0.47
GPHN-215ENST00000557654 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
GPHN-215ENST00000557654 RNF40O75150 1001 aa12.08□□□□□ -0.48
GPHN-215ENST00000557654 KRI1Q8N9T8 703 aaKnown RBP12.08□□□□□ -0.48
GPHN-215ENST00000557654 MINK1Q8N4C8 1332 aaPredicted RBP12.08□□□□□ -0.48
GPHN-215ENST00000557654 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms