RNA–Protein interactions for RNA: ENST00000557589.1

TIMELESS-205, Transcript of timeless circadian regulator, humanhuman

TSL 2

Gene TIMELESS, Length 2,784 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-205ENST00000557589 USP47Q96K76 1375 aa13.9□□□□□ -0.18
TIMELESS-205ENST00000557589 KIF15Q9NS87 1388 aa13.9□□□□□ -0.18
TIMELESS-205ENST00000557589 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
TIMELESS-205ENST00000557589 PKD2Q13563 968 aa13.89□□□□□ -0.19
TIMELESS-205ENST00000557589 IQGAP3Q86VI3 1631 aa13.89□□□□□ -0.19
TIMELESS-205ENST00000557589 BCORL1Q5H9F3 1711 aa13.89□□□□□ -0.19
TIMELESS-205ENST00000557589 FOXD1Q16676 465 aa13.89□□□□□ -0.19
TIMELESS-205ENST00000557589 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
TIMELESS-205ENST00000557589 NUP155O75694 1391 aa13.88□□□□□ -0.19
TIMELESS-205ENST00000557589 ATP10AO60312 1499 aa13.88□□□□□ -0.19
TIMELESS-205ENST00000557589 E9PCH4 1651 aa13.88□□□□□ -0.19
TIMELESS-205ENST00000557589 MAGI2Q86UL8 1455 aa13.88□□□□□ -0.19
TIMELESS-205ENST00000557589 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
TIMELESS-205ENST00000557589 DHX29Q7Z478 1369 aaKnown RBP13.87□□□□□ -0.19
TIMELESS-205ENST00000557589 ARAP3Q8WWN8 1544 aa13.87□□□□□ -0.19
TIMELESS-205ENST00000557589 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
TIMELESS-205ENST00000557589 C11orf95C9JLR9 678 aaPredicted RBP13.87□□□□□ -0.19
TIMELESS-205ENST00000557589 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
TIMELESS-205ENST00000557589 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
TIMELESS-205ENST00000557589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
TIMELESS-205ENST00000557589 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
TIMELESS-205ENST00000557589 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
TIMELESS-205ENST00000557589 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
TIMELESS-205ENST00000557589 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
TIMELESS-205ENST00000557589 SYCP2Q9BX26 1530 aa13.82□□□□□ -0.2
TIMELESS-205ENST00000557589 ARHGAP5Q13017 1502 aa13.82□□□□□ -0.2
TIMELESS-205ENST00000557589 ZMYM4Q5VZL5 1548 aa13.82□□□□□ -0.2
TIMELESS-205ENST00000557589 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
TIMELESS-205ENST00000557589 INSRP06213 1382 aa13.81□□□□□ -0.2
TIMELESS-205ENST00000557589 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
TIMELESS-205ENST00000557589 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
TIMELESS-205ENST00000557589 CCDC144AA2RUR9 1427 aa13.79□□□□□ -0.2
TIMELESS-205ENST00000557589 ZCCHC11Q5TAX3 1644 aaKnown RBP13.78□□□□□ -0.2
TIMELESS-205ENST00000557589 NEURL4Q96JN8 1562 aa13.78□□□□□ -0.2
TIMELESS-205ENST00000557589 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
TIMELESS-205ENST00000557589 PLCH2O75038 1416 aa13.78□□□□□ -0.2
TIMELESS-205ENST00000557589 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.2
TIMELESS-205ENST00000557589 ABCC1P33527 1531 aa13.77□□□□□ -0.2
TIMELESS-205ENST00000557589 PPP4R2Q9NY27 417 aa13.77□□□□□ -0.21
TIMELESS-205ENST00000557589 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
TIMELESS-205ENST00000557589 RTEL1-TNFRSF6BF6WH68 1400 aa13.77□□□□□ -0.21
TIMELESS-205ENST00000557589 AEBP2Q6ZN18 517 aaPredicted RBP13.77□□□□□ -0.21
TIMELESS-205ENST00000557589 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
TIMELESS-205ENST00000557589 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
TIMELESS-205ENST00000557589 RNF17Q9BXT8 1623 aaKnown RBP13.76□□□□□ -0.21
TIMELESS-205ENST00000557589 RALBP1Q15311 655 aa13.76□□□□□ -0.21
TIMELESS-205ENST00000557589 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
TIMELESS-205ENST00000557589 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
TIMELESS-205ENST00000557589 WDR7Q9Y4E6 1490 aa13.74□□□□□ -0.21
TIMELESS-205ENST00000557589 LRPPRCP42704 1394 aaKnown RBP13.74□□□□□ -0.21
TIMELESS-205ENST00000557589 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
TIMELESS-205ENST00000557589 DEPDC5O75140 1603 aa13.74□□□□□ -0.21
TIMELESS-205ENST00000557589 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
TIMELESS-205ENST00000557589 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
TIMELESS-205ENST00000557589 CYB5RLQ6IPT4 315 aa13.73□□□□□ -0.21
TIMELESS-205ENST00000557589 BCANQ96GW7 911 aa13.73□□□□□ -0.21
TIMELESS-205ENST00000557589 A2MP01023 1474 aa13.72□□□□□ -0.21
TIMELESS-205ENST00000557589 COL17A1Q9UMD9 1497 aaPredicted RBP13.72□□□□□ -0.21
TIMELESS-205ENST00000557589 MYBBP1AQ9BQG0 1328 aaKnown RBP13.71□□□□□ -0.22
TIMELESS-205ENST00000557589 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
TIMELESS-205ENST00000557589 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 TRPM2O94759 1503 aa13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 CEP152O94986 1710 aa13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 KIAA1210Q9ULL0 1709 aa13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 RBM19Q9Y4C8 960 aaKnown RBP13.69□□□□□ -0.22
TIMELESS-205ENST00000557589 PARD3Q8TEW0 1356 aa13.68□□□□□ -0.22
TIMELESS-205ENST00000557589 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
TIMELESS-205ENST00000557589 TET3O43151 1660 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 DCAF11Q8TEB1 546 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 ASXL2Q76L83 1435 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 ABCA9Q8IUA7 1624 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
TIMELESS-205ENST00000557589 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
TIMELESS-205ENST00000557589 INO80Q9ULG1 1556 aaPredicted RBP13.66□□□□□ -0.22
TIMELESS-205ENST00000557589 PTPRTO14522 1441 aa13.66□□□□□ -0.22
TIMELESS-205ENST00000557589 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
TIMELESS-205ENST00000557589 SCAPERQ9BY12 1400 aa13.65□□□□□ -0.22
TIMELESS-205ENST00000557589 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
TIMELESS-205ENST00000557589 ZNF326Q5BKZ1 582 aaKnown RBP13.65□□□□□ -0.22
TIMELESS-205ENST00000557589 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
TIMELESS-205ENST00000557589 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
TIMELESS-205ENST00000557589 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
TIMELESS-205ENST00000557589 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
TIMELESS-205ENST00000557589 SYNMO15061 1565 aa13.6□□□□□ -0.23
TIMELESS-205ENST00000557589 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
TIMELESS-205ENST00000557589 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
TIMELESS-205ENST00000557589 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
TIMELESS-205ENST00000557589 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
TIMELESS-205ENST00000557589 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
TIMELESS-205ENST00000557589 TESK2Q96S53 571 aa13.58□□□□□ -0.24
TIMELESS-205ENST00000557589 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
TIMELESS-205ENST00000557589 TMF1P82094 1093 aa13.58□□□□□ -0.24
TIMELESS-205ENST00000557589 GLI2P10070 1586 aa13.58□□□□□ -0.24
TIMELESS-205ENST00000557589 MYOM2P54296 1465 aa13.57□□□□□ -0.24
TIMELESS-205ENST00000557589 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
TIMELESS-205ENST00000557589 CFAP74Q9C0B2 1584 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms