RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 PLXNC1O60486 1568 aa24.47■■□□□ 1.51
TUBB3-214ENST00000557490 PPARGC1BQ86YN6 1023 aaKnown RBP24.47■■□□□ 1.51
TUBB3-214ENST00000557490 NCKAP5LQ9HCH0 1330 aa24.44■■□□□ 1.5
TUBB3-214ENST00000557490 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
TUBB3-214ENST00000557490 MAST1Q9Y2H9 1570 aa24.44■■□□□ 1.5
TUBB3-214ENST00000557490 ABCC5O15440 1437 aa24.44■■□□□ 1.5
TUBB3-214ENST00000557490 CNTLNQ9NXG0 1405 aa24.43■■□□□ 1.5
TUBB3-214ENST00000557490 HSPA1LP34931 641 aa24.42■■□□□ 1.5
TUBB3-214ENST00000557490 GGT6Q6P531 493 aa24.42■■□□□ 1.5
TUBB3-214ENST00000557490 NPATQ14207 1427 aa24.42■■□□□ 1.5
TUBB3-214ENST00000557490 DAPK1P53355 1430 aa24.41■■□□□ 1.5
TUBB3-214ENST00000557490 SHANK2Q9UPX8 1470 aa24.4■■□□□ 1.5
TUBB3-214ENST00000557490 KIF3BO15066 747 aa24.4■■□□□ 1.5
TUBB3-214ENST00000557490 MROH2AA6NES4 1674 aa24.38■■□□□ 1.49
TUBB3-214ENST00000557490 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
TUBB3-214ENST00000557490 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
TUBB3-214ENST00000557490 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
TUBB3-214ENST00000557490 ZNF142P52746 1687 aaPredicted RBP24.37■■□□□ 1.49
TUBB3-214ENST00000557490 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
TUBB3-214ENST00000557490 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
TUBB3-214ENST00000557490 MYO3AQ8NEV4 1616 aa24.34■■□□□ 1.49
TUBB3-214ENST00000557490 KIF15Q9NS87 1388 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 PKD2Q13563 968 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 PIP4K2BP78356 416 aa24.32■■□□□ 1.48
TUBB3-214ENST00000557490 ANKRD30AQ9BXX3 1397 aa24.31■■□□□ 1.48
TUBB3-214ENST00000557490 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
TUBB3-214ENST00000557490 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
TUBB3-214ENST00000557490 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
TUBB3-214ENST00000557490 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
TUBB3-214ENST00000557490 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
TUBB3-214ENST00000557490 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
TUBB3-214ENST00000557490 TOM1O60784 492 aa24.24■■□□□ 1.47
TUBB3-214ENST00000557490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.47
TUBB3-214ENST00000557490 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
TUBB3-214ENST00000557490 EIF2AK4Q9P2K8 1649 aaKnown RBP24.24■■□□□ 1.47
TUBB3-214ENST00000557490 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
TUBB3-214ENST00000557490 FAM135AQ9P2D6 1515 aa24.23■■□□□ 1.47
TUBB3-214ENST00000557490 CPS1P31327 1500 aa24.21■■□□□ 1.47
TUBB3-214ENST00000557490 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
TUBB3-214ENST00000557490 PTPRKQ15262 1439 aa24.2■■□□□ 1.46
TUBB3-214ENST00000557490 ITGAEP38570 1179 aa24.2■■□□□ 1.46
TUBB3-214ENST00000557490 RNF17Q9BXT8 1623 aaKnown RBP24.2■■□□□ 1.46
TUBB3-214ENST00000557490 RRBP1Q9P2E9 1410 aaKnown RBP24.18■■□□□ 1.46
TUBB3-214ENST00000557490 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
TUBB3-214ENST00000557490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.15■■□□□ 1.46
TUBB3-214ENST00000557490 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
TUBB3-214ENST00000557490 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
TUBB3-214ENST00000557490 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
TUBB3-214ENST00000557490 ABCC3O15438 1527 aa24.13■■□□□ 1.45
TUBB3-214ENST00000557490 KANK1Q14678 1352 aa24.13■■□□□ 1.45
TUBB3-214ENST00000557490 ANKRD50Q9ULJ7 1429 aa24.12■■□□□ 1.45
TUBB3-214ENST00000557490 MROH1Q8NDA8 1641 aa24.12■■□□□ 1.45
TUBB3-214ENST00000557490 A2ML1A8K2U0 1454 aa24.11■■□□□ 1.45
TUBB3-214ENST00000557490 PZPP20742 1482 aa24.11■■□□□ 1.45
TUBB3-214ENST00000557490 ZC3H13Q5T200 1668 aaKnown RBP24.09■■□□□ 1.45
TUBB3-214ENST00000557490 FBXO31Q5XUX0 539 aaPredicted RBP24.09■■□□□ 1.45
TUBB3-214ENST00000557490 PRDM15P57071 1507 aaPredicted RBP24.09■■□□□ 1.45
TUBB3-214ENST00000557490 VWDEQ8N2E2 1590 aa24.07■■□□□ 1.44
TUBB3-214ENST00000557490 TNRQ92752 1358 aa24.06■■□□□ 1.44
TUBB3-214ENST00000557490 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
TUBB3-214ENST00000557490 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
TUBB3-214ENST00000557490 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
TUBB3-214ENST00000557490 CEP152O94986 1710 aa24.01■■□□□ 1.43
TUBB3-214ENST00000557490 ARHGAP31Q2M1Z3 1444 aa24■■□□□ 1.43
TUBB3-214ENST00000557490 LMTK2Q8IWU2 1503 aa23.98■■□□□ 1.43
TUBB3-214ENST00000557490 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
TUBB3-214ENST00000557490 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
TUBB3-214ENST00000557490 STRCP1A6NGW2 1772 aa23.93■■□□□ 1.42
TUBB3-214ENST00000557490 UNC13BO14795 1591 aa23.91■■□□□ 1.42
TUBB3-214ENST00000557490 ANKLE2Q86XL3 938 aa23.91■■□□□ 1.42
TUBB3-214ENST00000557490 MED14O60244 1454 aa23.91■■□□□ 1.42
TUBB3-214ENST00000557490 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
TUBB3-214ENST00000557490 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
TUBB3-214ENST00000557490 NUP155O75694 1391 aa23.9■■□□□ 1.42
TUBB3-214ENST00000557490 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.42
TUBB3-214ENST00000557490 THEMISQ8N1K5 641 aaPredicted RBP23.89■■□□□ 1.41
TUBB3-214ENST00000557490 NAIPQ13075 1403 aa23.89■■□□□ 1.41
TUBB3-214ENST00000557490 SYNMO15061 1565 aa23.88■■□□□ 1.41
TUBB3-214ENST00000557490 IQGAP1P46940 1657 aa23.88■■□□□ 1.41
TUBB3-214ENST00000557490 HFM1A2PYH4 1435 aa23.86■■□□□ 1.41
TUBB3-214ENST00000557490 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
TUBB3-214ENST00000557490 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
TUBB3-214ENST00000557490 UGGT1Q9NYU2 1555 aa23.85■■□□□ 1.41
TUBB3-214ENST00000557490 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
TUBB3-214ENST00000557490 TET3O43151 1660 aa23.84■■□□□ 1.41
TUBB3-214ENST00000557490 IQGAP3Q86VI3 1631 aa23.82■■□□□ 1.4
TUBB3-214ENST00000557490 NOS1P29475 1434 aa23.82■■□□□ 1.4
TUBB3-214ENST00000557490 GCC2Q8IWJ2 1684 aa23.82■■□□□ 1.4
TUBB3-214ENST00000557490 SETD1AO15047 1707 aaKnown RBP23.81■■□□□ 1.4
TUBB3-214ENST00000557490 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
TUBB3-214ENST00000557490 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
TUBB3-214ENST00000557490 IDI1Q13907 227 aa23.78■■□□□ 1.4
TUBB3-214ENST00000557490 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
TUBB3-214ENST00000557490 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
TUBB3-214ENST00000557490 PIK3C2BO00750 1634 aa23.72■■□□□ 1.39
TUBB3-214ENST00000557490 E9PCH4 1651 aa23.72■■□□□ 1.39
TUBB3-214ENST00000557490 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
TUBB3-214ENST00000557490 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms