RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 SYNJ2O15056 1496 aa10.62□□□□□ -0.71
PRKCH-224ENST00000557473 GTPBP6O43824 516 aaPredicted RBP10.62□□□□□ -0.71
PRKCH-224ENST00000557473 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
PRKCH-224ENST00000557473 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
PRKCH-224ENST00000557473 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
PRKCH-224ENST00000557473 FOXK1P85037 733 aa10.61□□□□□ -0.71
PRKCH-224ENST00000557473 ABCA10Q8WWZ4 1543 aa10.61□□□□□ -0.71
PRKCH-224ENST00000557473 SLC34A2O95436 690 aa10.6□□□□□ -0.71
PRKCH-224ENST00000557473 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
PRKCH-224ENST00000557473 CHMP7Q8WUX9 453 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-224ENST00000557473 GAPVD1Q14C86 1478 aa10.59□□□□□ -0.71
PRKCH-224ENST00000557473 PBRM1Q86U86 1689 aa10.59□□□□□ -0.71
PRKCH-224ENST00000557473 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRKCH-224ENST00000557473 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
PRKCH-224ENST00000557473 AXIN2Q9Y2T1 843 aa10.55□□□□□ -0.72
PRKCH-224ENST00000557473 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
PRKCH-224ENST00000557473 PPP1R15BQ5SWA1 713 aa10.54□□□□□ -0.72
PRKCH-224ENST00000557473 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
PRKCH-224ENST00000557473 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
PRKCH-224ENST00000557473 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
PRKCH-224ENST00000557473 BIVM-ERCC5R4GMW8 1640 aa10.53□□□□□ -0.72
PRKCH-224ENST00000557473 TOP2BQ02880 1626 aa10.52□□□□□ -0.73
PRKCH-224ENST00000557473 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
PRKCH-224ENST00000557473 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
PRKCH-224ENST00000557473 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
PRKCH-224ENST00000557473 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
PRKCH-224ENST00000557473 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
PRKCH-224ENST00000557473 MYT1Q01538 1121 aa10.5□□□□□ -0.73
PRKCH-224ENST00000557473 NUP160Q12769 1436 aa10.5□□□□□ -0.73
PRKCH-224ENST00000557473 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
PRKCH-224ENST00000557473 TBC1D12O60347 775 aa10.49□□□□□ -0.73
PRKCH-224ENST00000557473 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
PRKCH-224ENST00000557473 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
PRKCH-224ENST00000557473 PDE4AP27815 886 aa10.48□□□□□ -0.73
PRKCH-224ENST00000557473 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
PRKCH-224ENST00000557473 ERICH3Q5RHP9 1530 aa10.48□□□□□ -0.73
PRKCH-224ENST00000557473 KDM4FA0A1W2PPD8 638 aa10.47□□□□□ -0.73
PRKCH-224ENST00000557473 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
PRKCH-224ENST00000557473 MYT1LQ9UL68 1186 aa10.47□□□□□ -0.73
PRKCH-224ENST00000557473 FHAD1B1AJZ9 1412 aa10.47□□□□□ -0.73
PRKCH-224ENST00000557473 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
PRKCH-224ENST00000557473 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
PRKCH-224ENST00000557473 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
PRKCH-224ENST00000557473 SHROOM2Q13796 1616 aa10.46□□□□□ -0.74
PRKCH-224ENST00000557473 PBX2P40425 430 aa10.45□□□□□ -0.74
PRKCH-224ENST00000557473 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
PRKCH-224ENST00000557473 PSEN2P49810 448 aa10.43□□□□□ -0.74
PRKCH-224ENST00000557473 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
PRKCH-224ENST00000557473 TTBK1Q5TCY1 1321 aaPredicted RBP10.42□□□□□ -0.74
PRKCH-224ENST00000557473 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
PRKCH-224ENST00000557473 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-224ENST00000557473 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
PRKCH-224ENST00000557473 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
PRKCH-224ENST00000557473 ZNF454Q8N9F8 522 aa10.4□□□□□ -0.74
PRKCH-224ENST00000557473 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
PRKCH-224ENST00000557473 MFSD10Q14728 455 aa10.38□□□□□ -0.75
PRKCH-224ENST00000557473 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
PRKCH-224ENST00000557473 EVI5O60447 810 aa10.37□□□□□ -0.75
PRKCH-224ENST00000557473 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
PRKCH-224ENST00000557473 PTGER2P43116 358 aa10.36□□□□□ -0.75
PRKCH-224ENST00000557473 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
PRKCH-224ENST00000557473 ADGRD1Q6QNK2 874 aa10.36□□□□□ -0.75
PRKCH-224ENST00000557473 PRG4Q92954 1404 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-224ENST00000557473 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
PRKCH-224ENST00000557473 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-224ENST00000557473 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-224ENST00000557473 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
PRKCH-224ENST00000557473 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
PRKCH-224ENST00000557473 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
PRKCH-224ENST00000557473 CUL7Q14999 1698 aa10.31□□□□□ -0.76
PRKCH-224ENST00000557473 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
PRKCH-224ENST00000557473 FOSBP53539 338 aa10.3□□□□□ -0.76
PRKCH-224ENST00000557473 KIF27Q86VH2 1401 aa10.3□□□□□ -0.76
PRKCH-224ENST00000557473 MAPKBP1O60336 1514 aa10.29□□□□□ -0.76
PRKCH-224ENST00000557473 KIF13AQ9H1H9 1805 aa10.29□□□□□ -0.76
PRKCH-224ENST00000557473 IGF1RP08069 1367 aa10.28□□□□□ -0.76
PRKCH-224ENST00000557473 DPYSL4O14531 572 aa10.28□□□□□ -0.76
PRKCH-224ENST00000557473 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
PRKCH-224ENST00000557473 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
PRKCH-224ENST00000557473 ABCC10Q5T3U5 1492 aa10.27□□□□□ -0.77
PRKCH-224ENST00000557473 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
PRKCH-224ENST00000557473 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
PRKCH-224ENST00000557473 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
PRKCH-224ENST00000557473 TK2O00142 265 aa10.25□□□□□ -0.77
PRKCH-224ENST00000557473 PTPREP23469 700 aa10.25□□□□□ -0.77
PRKCH-224ENST00000557473 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
PRKCH-224ENST00000557473 DIP2BQ9P265 1576 aa10.25□□□□□ -0.77
PRKCH-224ENST00000557473 HRO43593 1189 aa10.24□□□□□ -0.77
PRKCH-224ENST00000557473 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
PRKCH-224ENST00000557473 VPS9D1Q9Y2B5 631 aa10.23□□□□□ -0.77
PRKCH-224ENST00000557473 PCDHGA10Q9Y5H3 936 aa10.22□□□□□ -0.77
PRKCH-224ENST00000557473 CAMK2BQ13554 666 aa10.21□□□□□ -0.77
PRKCH-224ENST00000557473 CARMIL1Q5VZK9 1371 aa10.21□□□□□ -0.78
PRKCH-224ENST00000557473 IQGAP2Q13576 1575 aa10.19□□□□□ -0.78
PRKCH-224ENST00000557473 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
PRKCH-224ENST00000557473 DDX12PQ92771 950 aa10.19□□□□□ -0.78
PRKCH-224ENST00000557473 PTPRGP23470 1445 aa10.18□□□□□ -0.78
PRKCH-224ENST00000557473 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
PRKCH-224ENST00000557473 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
PRKCH-224ENST00000557473 TNIKQ9UKE5 1360 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms