RNA–Protein interactions for RNA: ENST00000557357.5

PSMC1-207, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 4

Gene PSMC1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-207ENST00000557357 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
PSMC1-207ENST00000557357 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
PSMC1-207ENST00000557357 AGLP35573 1532 aa12.06□□□□□ -0.48
PSMC1-207ENST00000557357 SOCS7O14512 581 aa12.06□□□□□ -0.48
PSMC1-207ENST00000557357 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
PSMC1-207ENST00000557357 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
PSMC1-207ENST00000557357 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
PSMC1-207ENST00000557357 CLIP1P30622 1438 aa12.04□□□□□ -0.48
PSMC1-207ENST00000557357 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
PSMC1-207ENST00000557357 ABCC1P33527 1531 aa12.03□□□□□ -0.48
PSMC1-207ENST00000557357 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
PSMC1-207ENST00000557357 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
PSMC1-207ENST00000557357 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
PSMC1-207ENST00000557357 SPATA31D1Q6ZQQ2 1576 aa12.03□□□□□ -0.48
PSMC1-207ENST00000557357 ITSN2Q9NZM3 1697 aa12.03□□□□□ -0.48
PSMC1-207ENST00000557357 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
PSMC1-207ENST00000557357 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
PSMC1-207ENST00000557357 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.48
PSMC1-207ENST00000557357 UBTFP17480 764 aaKnown RBP12.02□□□□□ -0.49
PSMC1-207ENST00000557357 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
PSMC1-207ENST00000557357 POTEIP0CG38 1075 aa12□□□□□ -0.49
PSMC1-207ENST00000557357 PROM2Q8N271 834 aa12□□□□□ -0.49
PSMC1-207ENST00000557357 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
PSMC1-207ENST00000557357 MROH2AA6NES4 1674 aa12□□□□□ -0.49
PSMC1-207ENST00000557357 ESF1Q9H501 851 aaKnown RBP11.99□□□□□ -0.49
PSMC1-207ENST00000557357 CDC42BPAQ5VT25 1732 aa11.99□□□□□ -0.49
PSMC1-207ENST00000557357 NPATQ14207 1427 aa11.98□□□□□ -0.49
PSMC1-207ENST00000557357 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
PSMC1-207ENST00000557357 CCDC18Q5T9S5 1454 aa11.96□□□□□ -0.49
PSMC1-207ENST00000557357 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
PSMC1-207ENST00000557357 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
PSMC1-207ENST00000557357 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
PSMC1-207ENST00000557357 SUPT6HQ7KZ85 1726 aaKnown RBP11.94□□□□□ -0.5
PSMC1-207ENST00000557357 ZNF142P52746 1687 aaPredicted RBP11.94□□□□□ -0.5
PSMC1-207ENST00000557357 SYCP2Q9BX26 1530 aa11.92□□□□□ -0.5
PSMC1-207ENST00000557357 CLTCQ00610 1675 aaKnown RBP11.92□□□□□ -0.5
PSMC1-207ENST00000557357 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
PSMC1-207ENST00000557357 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
PSMC1-207ENST00000557357 ZNF335Q9H4Z2 1342 aaPredicted RBP11.91□□□□□ -0.5
PSMC1-207ENST00000557357 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
PSMC1-207ENST00000557357 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
PSMC1-207ENST00000557357 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
PSMC1-207ENST00000557357 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
PSMC1-207ENST00000557357 INO80Q9ULG1 1556 aaPredicted RBP11.9□□□□□ -0.5
PSMC1-207ENST00000557357 CEP170BQ9Y4F5 1589 aaPredicted RBP11.9□□□□□ -0.5
PSMC1-207ENST00000557357 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
PSMC1-207ENST00000557357 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
PSMC1-207ENST00000557357 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
PSMC1-207ENST00000557357 PKD2Q13563 968 aa11.89□□□□□ -0.51
PSMC1-207ENST00000557357 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
PSMC1-207ENST00000557357 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
PSMC1-207ENST00000557357 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSMC1-207ENST00000557357 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
PSMC1-207ENST00000557357 A2MP01023 1474 aa11.88□□□□□ -0.51
PSMC1-207ENST00000557357 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
PSMC1-207ENST00000557357 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
PSMC1-207ENST00000557357 DCBLD2Q96PD2 775 aa11.87□□□□□ -0.51
PSMC1-207ENST00000557357 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
PSMC1-207ENST00000557357 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
PSMC1-207ENST00000557357 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
PSMC1-207ENST00000557357 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
PSMC1-207ENST00000557357 GGT6Q6P531 493 aa11.83□□□□□ -0.52
PSMC1-207ENST00000557357 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
PSMC1-207ENST00000557357 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
PSMC1-207ENST00000557357 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
PSMC1-207ENST00000557357 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
PSMC1-207ENST00000557357 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
PSMC1-207ENST00000557357 CPS1P31327 1500 aa11.8□□□□□ -0.52
PSMC1-207ENST00000557357 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
PSMC1-207ENST00000557357 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
PSMC1-207ENST00000557357 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
PSMC1-207ENST00000557357 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
PSMC1-207ENST00000557357 RTEL1-TNFRSF6BF6WH68 1400 aa11.78□□□□□ -0.52
PSMC1-207ENST00000557357 HSPA1LP34931 641 aa11.78□□□□□ -0.52
PSMC1-207ENST00000557357 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
PSMC1-207ENST00000557357 SHANK2Q9UPX8 1470 aa11.77□□□□□ -0.52
PSMC1-207ENST00000557357 ZNF644Q9H582 1327 aaPredicted RBP11.77□□□□□ -0.53
PSMC1-207ENST00000557357 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
PSMC1-207ENST00000557357 DHX29Q7Z478 1369 aaKnown RBP11.77□□□□□ -0.53
PSMC1-207ENST00000557357 PZPP20742 1482 aa11.76□□□□□ -0.53
PSMC1-207ENST00000557357 FAM135AQ9P2D6 1515 aa11.76□□□□□ -0.53
PSMC1-207ENST00000557357 TOM1O60784 492 aa11.76□□□□□ -0.53
PSMC1-207ENST00000557357 TNRQ92752 1358 aa11.76□□□□□ -0.53
PSMC1-207ENST00000557357 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
PSMC1-207ENST00000557357 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
PSMC1-207ENST00000557357 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
PSMC1-207ENST00000557357 FBXO31Q5XUX0 539 aaPredicted RBP11.75□□□□□ -0.53
PSMC1-207ENST00000557357 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
PSMC1-207ENST00000557357 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
PSMC1-207ENST00000557357 MIER1Q8N108 512 aa11.74□□□□□ -0.53
PSMC1-207ENST00000557357 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
PSMC1-207ENST00000557357 DEPDC5O75140 1603 aa11.74□□□□□ -0.53
PSMC1-207ENST00000557357 MED14O60244 1454 aa11.73□□□□□ -0.53
PSMC1-207ENST00000557357 NLRP1Q9C000 1473 aa11.72□□□□□ -0.53
PSMC1-207ENST00000557357 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
PSMC1-207ENST00000557357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSMC1-207ENST00000557357 KIF3BO15066 747 aa11.72□□□□□ -0.53
PSMC1-207ENST00000557357 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
PSMC1-207ENST00000557357 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.53
PSMC1-207ENST00000557357 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms