RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
LINC00640-204ENST00000557295 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
LINC00640-204ENST00000557295 NLRP6P59044 892 aa11.88□□□□□ -0.51
LINC00640-204ENST00000557295 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
LINC00640-204ENST00000557295 CD109Q6YHK3 1445 aa11.87□□□□□ -0.51
LINC00640-204ENST00000557295 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
LINC00640-204ENST00000557295 TMEM106CQ9BVX2 250 aa11.87□□□□□ -0.51
LINC00640-204ENST00000557295 SOX12O15370 315 aa11.86□□□□□ -0.51
LINC00640-204ENST00000557295 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
LINC00640-204ENST00000557295 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
LINC00640-204ENST00000557295 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
LINC00640-204ENST00000557295 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
LINC00640-204ENST00000557295 PTPRMP28827 1452 aa11.83□□□□□ -0.52
LINC00640-204ENST00000557295 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
LINC00640-204ENST00000557295 IER5LQ5T953 404 aa11.82□□□□□ -0.52
LINC00640-204ENST00000557295 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
LINC00640-204ENST00000557295 LMTK3Q96Q04 1460 aa11.81□□□□□ -0.52
LINC00640-204ENST00000557295 ARAP3Q8WWN8 1544 aa11.81□□□□□ -0.52
LINC00640-204ENST00000557295 SEC24BO95487 1268 aa11.8□□□□□ -0.52
LINC00640-204ENST00000557295 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
LINC00640-204ENST00000557295 KCNH8Q96L42 1107 aa11.8□□□□□ -0.52
LINC00640-204ENST00000557295 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
LINC00640-204ENST00000557295 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
LINC00640-204ENST00000557295 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
LINC00640-204ENST00000557295 P3H3Q8IVL6 736 aa11.77□□□□□ -0.53
LINC00640-204ENST00000557295 KIAA0556O60303 1618 aa11.77□□□□□ -0.53
LINC00640-204ENST00000557295 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
LINC00640-204ENST00000557295 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
LINC00640-204ENST00000557295 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
LINC00640-204ENST00000557295 KIF21BO75037 1637 aa11.75□□□□□ -0.53
LINC00640-204ENST00000557295 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
LINC00640-204ENST00000557295 ADAMTSL3P82987 1691 aa11.74□□□□□ -0.53
LINC00640-204ENST00000557295 ABCA8O94911 1581 aa11.73□□□□□ -0.53
LINC00640-204ENST00000557295 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
LINC00640-204ENST00000557295 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
LINC00640-204ENST00000557295 SOCS7O14512 581 aa11.72□□□□□ -0.53
LINC00640-204ENST00000557295 RAPGEF3O95398 923 aa11.72□□□□□ -0.53
LINC00640-204ENST00000557295 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
LINC00640-204ENST00000557295 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
LINC00640-204ENST00000557295 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.53
LINC00640-204ENST00000557295 PPP1R37O75864 691 aa11.7□□□□□ -0.54
LINC00640-204ENST00000557295 PRKCSHP14314 528 aaPredicted RBP11.7□□□□□ -0.54
LINC00640-204ENST00000557295 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
LINC00640-204ENST00000557295 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
LINC00640-204ENST00000557295 ARID4BQ4LE39 1312 aaPredicted RBP11.69□□□□□ -0.54
LINC00640-204ENST00000557295 PLCG2P16885 1265 aa11.69□□□□□ -0.54
LINC00640-204ENST00000557295 ILDR2Q71H61 639 aa11.69□□□□□ -0.54
LINC00640-204ENST00000557295 HSPA2P54652 639 aa11.68□□□□□ -0.54
LINC00640-204ENST00000557295 NEO1Q92859 1461 aa11.68□□□□□ -0.54
LINC00640-204ENST00000557295 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
LINC00640-204ENST00000557295 ATP10BO94823 1461 aa11.66□□□□□ -0.54
LINC00640-204ENST00000557295 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
LINC00640-204ENST00000557295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00640-204ENST00000557295 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
LINC00640-204ENST00000557295 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
LINC00640-204ENST00000557295 BCORL1Q5H9F3 1711 aa11.63□□□□□ -0.55
LINC00640-204ENST00000557295 PDE4AP27815 886 aa11.63□□□□□ -0.55
LINC00640-204ENST00000557295 ABCA9Q8IUA7 1624 aa11.63□□□□□ -0.55
LINC00640-204ENST00000557295 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
LINC00640-204ENST00000557295 POGZQ7Z3K3 1410 aa11.61□□□□□ -0.55
LINC00640-204ENST00000557295 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
LINC00640-204ENST00000557295 FRMPD1Q5SYB0 1578 aa11.61□□□□□ -0.55
LINC00640-204ENST00000557295 LARP6Q9BRS8 491 aaKnown RBP11.6□□□□□ -0.55
LINC00640-204ENST00000557295 FHOD3Q2V2M9 1422 aa11.6□□□□□ -0.55
LINC00640-204ENST00000557295 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
LINC00640-204ENST00000557295 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
LINC00640-204ENST00000557295 G3V3G9 751 aa11.58□□□□□ -0.56
LINC00640-204ENST00000557295 E2F4Q16254 413 aa11.58□□□□□ -0.56
LINC00640-204ENST00000557295 KCNV2Q8TDN2 545 aa11.58□□□□□ -0.56
LINC00640-204ENST00000557295 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
LINC00640-204ENST00000557295 AKNAQ7Z591 1439 aa11.58□□□□□ -0.56
LINC00640-204ENST00000557295 FANCAO15360 1455 aa11.57□□□□□ -0.56
LINC00640-204ENST00000557295 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
LINC00640-204ENST00000557295 YEATS2Q9ULM3 1422 aa11.56□□□□□ -0.56
LINC00640-204ENST00000557295 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
LINC00640-204ENST00000557295 MAGI2Q86UL8 1455 aa11.54□□□□□ -0.56
LINC00640-204ENST00000557295 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
LINC00640-204ENST00000557295 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
LINC00640-204ENST00000557295 ZMYM4Q5VZL5 1548 aa11.53□□□□□ -0.56
LINC00640-204ENST00000557295 ARHGEF1Q92888 912 aaKnown RBP11.52□□□□□ -0.57
LINC00640-204ENST00000557295 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
LINC00640-204ENST00000557295 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
LINC00640-204ENST00000557295 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
LINC00640-204ENST00000557295 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
LINC00640-204ENST00000557295 PLEKHD1A6NEE1 506 aa11.5□□□□□ -0.57
LINC00640-204ENST00000557295 MLECQ14165 292 aa11.5□□□□□ -0.57
LINC00640-204ENST00000557295 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
LINC00640-204ENST00000557295 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
LINC00640-204ENST00000557295 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
LINC00640-204ENST00000557295 SPATA31D1Q6ZQQ2 1576 aa11.49□□□□□ -0.57
LINC00640-204ENST00000557295 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
LINC00640-204ENST00000557295 PTPRTO14522 1441 aa11.48□□□□□ -0.57
LINC00640-204ENST00000557295 ARHGEF12Q9NZN5 1544 aa11.48□□□□□ -0.57
LINC00640-204ENST00000557295 RICTORQ6R327 1708 aa11.46□□□□□ -0.57
LINC00640-204ENST00000557295 RAPGEF6Q8TEU7 1601 aa11.46□□□□□ -0.57
LINC00640-204ENST00000557295 UHRF1BP1Q6BDS2 1440 aa11.46□□□□□ -0.57
LINC00640-204ENST00000557295 CEBPAP49715 358 aaPredicted RBP11.46□□□□□ -0.57
LINC00640-204ENST00000557295 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
LINC00640-204ENST00000557295 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
LINC00640-204ENST00000557295 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms