RNA–Protein interactions for RNA: ENST00000557193.1

NEMF-214, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-214ENST00000557193 SLC24A3Q9HC58 644 aa12.05□□□□□ -0.48
NEMF-214ENST00000557193 HIC1Q14526 733 aa12.04□□□□□ -0.48
NEMF-214ENST00000557193 GNPATO15228 680 aa12.03□□□□□ -0.48
NEMF-214ENST00000557193 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
NEMF-214ENST00000557193 GPR37O15354 613 aa12.02□□□□□ -0.49
NEMF-214ENST00000557193 PTGDRQ13258 359 aa12.01□□□□□ -0.49
NEMF-214ENST00000557193 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
NEMF-214ENST00000557193 AK7Q96M32 723 aa12.01□□□□□ -0.49
NEMF-214ENST00000557193 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
NEMF-214ENST00000557193 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
NEMF-214ENST00000557193 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
NEMF-214ENST00000557193 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
NEMF-214ENST00000557193 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
NEMF-214ENST00000557193 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
NEMF-214ENST00000557193 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
NEMF-214ENST00000557193 NPDC1Q9NQX5 325 aaPredicted RBP11.95□□□□□ -0.5
NEMF-214ENST00000557193 IRF6O14896 467 aa11.92□□□□□ -0.5
NEMF-214ENST00000557193 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
NEMF-214ENST00000557193 FECHP22830 423 aa11.91□□□□□ -0.5
NEMF-214ENST00000557193 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
NEMF-214ENST00000557193 ST18O60284 1047 aa11.9□□□□□ -0.5
NEMF-214ENST00000557193 PTPREP23469 700 aa11.9□□□□□ -0.5
NEMF-214ENST00000557193 ERBB3P21860 1342 aa11.89□□□□□ -0.51
NEMF-214ENST00000557193 SUPT5HO00267 1087 aaKnown RBP11.89□□□□□ -0.51
NEMF-214ENST00000557193 TRIM66O15016 1216 aa11.89□□□□□ -0.51
NEMF-214ENST00000557193 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
NEMF-214ENST00000557193 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
NEMF-214ENST00000557193 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
NEMF-214ENST00000557193 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
NEMF-214ENST00000557193 EMP3P54852 163 aa11.87□□□□□ -0.51
NEMF-214ENST00000557193 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
NEMF-214ENST00000557193 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
NEMF-214ENST00000557193 PRSS12P56730 875 aa11.85□□□□□ -0.51
NEMF-214ENST00000557193 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
NEMF-214ENST00000557193 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
NEMF-214ENST00000557193 PDE4DQ08499 809 aa11.83□□□□□ -0.52
NEMF-214ENST00000557193 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
NEMF-214ENST00000557193 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
NEMF-214ENST00000557193 COL9A1P20849 921 aa11.82□□□□□ -0.52
NEMF-214ENST00000557193 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
NEMF-214ENST00000557193 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
NEMF-214ENST00000557193 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
NEMF-214ENST00000557193 OATP04181 439 aa11.81□□□□□ -0.52
NEMF-214ENST00000557193 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
NEMF-214ENST00000557193 AMHR2Q16671 573 aa11.8□□□□□ -0.52
NEMF-214ENST00000557193 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
NEMF-214ENST00000557193 FAM205CA6NFA0 338 aa11.78□□□□□ -0.52
NEMF-214ENST00000557193 ARHGAP33O14559 1287 aa11.78□□□□□ -0.52
NEMF-214ENST00000557193 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
NEMF-214ENST00000557193 PBX2P40425 430 aa11.76□□□□□ -0.53
NEMF-214ENST00000557193 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
NEMF-214ENST00000557193 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
NEMF-214ENST00000557193 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
NEMF-214ENST00000557193 TRIM6-TRIM34B2RNG4 842 aa11.75□□□□□ -0.53
NEMF-214ENST00000557193 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
NEMF-214ENST00000557193 TTLL12Q14166 644 aaPredicted RBP11.75□□□□□ -0.53
NEMF-214ENST00000557193 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
NEMF-214ENST00000557193 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
NEMF-214ENST00000557193 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
NEMF-214ENST00000557193 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
NEMF-214ENST00000557193 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
NEMF-214ENST00000557193 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
NEMF-214ENST00000557193 PSEN2P49810 448 aa11.73□□□□□ -0.53
NEMF-214ENST00000557193 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
NEMF-214ENST00000557193 RSF1Q96T23 1441 aaPredicted RBP11.72□□□□□ -0.53
NEMF-214ENST00000557193 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
NEMF-214ENST00000557193 CLCN1P35523 988 aa11.72□□□□□ -0.53
NEMF-214ENST00000557193 PXYLP1Q8TE99 480 aa11.72□□□□□ -0.53
NEMF-214ENST00000557193 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
NEMF-214ENST00000557193 CECR2Q9BXF3 1484 aa11.71□□□□□ -0.53
NEMF-214ENST00000557193 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.53
NEMF-214ENST00000557193 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.53
NEMF-214ENST00000557193 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
NEMF-214ENST00000557193 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
NEMF-214ENST00000557193 SLC4A5Q9BY07 1137 aa11.7□□□□□ -0.54
NEMF-214ENST00000557193 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
NEMF-214ENST00000557193 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
NEMF-214ENST00000557193 TATDN2Q93075 761 aa11.69□□□□□ -0.54
NEMF-214ENST00000557193 PHOX2BQ99453 314 aa11.69□□□□□ -0.54
NEMF-214ENST00000557193 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
NEMF-214ENST00000557193 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
NEMF-214ENST00000557193 GPCPD1Q9NPB8 672 aa11.68□□□□□ -0.54
NEMF-214ENST00000557193 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
NEMF-214ENST00000557193 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
NEMF-214ENST00000557193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
NEMF-214ENST00000557193 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
NEMF-214ENST00000557193 EYA1Q99502 592 aa11.67□□□□□ -0.54
NEMF-214ENST00000557193 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
NEMF-214ENST00000557193 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
NEMF-214ENST00000557193 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
NEMF-214ENST00000557193 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
NEMF-214ENST00000557193 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
NEMF-214ENST00000557193 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.54
NEMF-214ENST00000557193 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
NEMF-214ENST00000557193 RCCD1A6NED2 376 aa11.64□□□□□ -0.55
NEMF-214ENST00000557193 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
NEMF-214ENST00000557193 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
NEMF-214ENST00000557193 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
NEMF-214ENST00000557193 DNAJB2P25686 324 aa11.63□□□□□ -0.55
NEMF-214ENST00000557193 REPIN1Q9BWE0 567 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms