RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
NEK9-210ENST00000557026 TPM4P67936 248 aa14.99□□□□□ -0.01
NEK9-210ENST00000557026 MEX3CQ5U5Q3 659 aaKnown RBP14.99□□□□□ -0.01
NEK9-210ENST00000557026 NOL10Q9BSC4 688 aaKnown RBP14.99□□□□□ -0.01
NEK9-210ENST00000557026 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
NEK9-210ENST00000557026 ATF3P18847 181 aa14.98□□□□□ -0.01
NEK9-210ENST00000557026 FAM69CQ0P6D2 419 aa14.98□□□□□ -0.01
NEK9-210ENST00000557026 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
NEK9-210ENST00000557026 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
NEK9-210ENST00000557026 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
NEK9-210ENST00000557026 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.01
NEK9-210ENST00000557026 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.01
NEK9-210ENST00000557026 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
NEK9-210ENST00000557026 TTC5Q8N0Z6 440 aa14.96□□□□□ -0.01
NEK9-210ENST00000557026 KIF15Q9NS87 1388 aa14.95□□□□□ -0.02
NEK9-210ENST00000557026 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
NEK9-210ENST00000557026 DDX58O95786 925 aaKnown RBP14.95□□□□□ -0.02
NEK9-210ENST00000557026 PSME1Q06323 249 aa14.94□□□□□ -0.02
NEK9-210ENST00000557026 TEFQ10587 303 aa14.94□□□□□ -0.02
NEK9-210ENST00000557026 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
NEK9-210ENST00000557026 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
NEK9-210ENST00000557026 SYNJ2O15056 1496 aa14.92□□□□□ -0.02
NEK9-210ENST00000557026 MRC2Q9UBG0 1479 aa14.92□□□□□ -0.02
NEK9-210ENST00000557026 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
NEK9-210ENST00000557026 CLSTN1O94985 981 aa14.92□□□□□ -0.02
NEK9-210ENST00000557026 FRAT2O75474 233 aaPredicted RBP14.92□□□□□ -0.02
NEK9-210ENST00000557026 GBP4Q96PP9 640 aa14.92□□□□□ -0.02
NEK9-210ENST00000557026 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
NEK9-210ENST00000557026 RGS3P49796 1198 aa14.91□□□□□ -0.02
NEK9-210ENST00000557026 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
NEK9-210ENST00000557026 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
NEK9-210ENST00000557026 CHMP3Q9Y3E7 222 aa14.89□□□□□ -0.03
NEK9-210ENST00000557026 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
NEK9-210ENST00000557026 WIZO95785 1651 aa14.89□□□□□ -0.03
NEK9-210ENST00000557026 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
NEK9-210ENST00000557026 AAMPQ13685 434 aa14.89□□□□□ -0.03
NEK9-210ENST00000557026 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
NEK9-210ENST00000557026 CPLX2Q6PUV4 134 aaKnown RBP14.89□□□□□ -0.03
NEK9-210ENST00000557026 GPRASP1Q5JY77 1395 aa14.88□□□□□ -0.03
NEK9-210ENST00000557026 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
NEK9-210ENST00000557026 THEMISQ8N1K5 641 aaPredicted RBP14.88□□□□□ -0.03
NEK9-210ENST00000557026 HSP90AB4PQ58FF6 505 aa14.87□□□□□ -0.03
NEK9-210ENST00000557026 CENPJQ9HC77 1338 aaPredicted RBP14.86□□□□□ -0.03
NEK9-210ENST00000557026 RCAN3Q9UKA8 241 aa14.86□□□□□ -0.03
NEK9-210ENST00000557026 CTDP1Q9Y5B0 961 aaPredicted RBP14.86□□□□□ -0.03
NEK9-210ENST00000557026 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
NEK9-210ENST00000557026 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
NEK9-210ENST00000557026 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
NEK9-210ENST00000557026 MYBBP1AQ9BQG0 1328 aaKnown RBP14.85□□□□□ -0.03
NEK9-210ENST00000557026 RAPGEF4Q8WZA2 1011 aa14.85□□□□□ -0.03
NEK9-210ENST00000557026 SYNE3Q6ZMZ3 975 aa14.84□□□□□ -0.03
NEK9-210ENST00000557026 API5Q9BZZ5 524 aaKnown RBP14.84□□□□□ -0.03
NEK9-210ENST00000557026 TRAK1Q9UPV9 953 aa14.84□□□□□ -0.03
NEK9-210ENST00000557026 KANK4Q5T7N3 995 aaPredicted RBP14.83□□□□□ -0.03
NEK9-210ENST00000557026 L3MBTL2Q969R5 705 aa14.83□□□□□ -0.04
NEK9-210ENST00000557026 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
NEK9-210ENST00000557026 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
NEK9-210ENST00000557026 MARCH6O60337 910 aa14.82□□□□□ -0.04
NEK9-210ENST00000557026 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
NEK9-210ENST00000557026 E9PSI1 815 aa14.81□□□□□ -0.04
NEK9-210ENST00000557026 ATP6V1DQ9Y5K8 247 aa14.81□□□□□ -0.04
NEK9-210ENST00000557026 CEP89Q96ST8 783 aa14.81□□□□□ -0.04
NEK9-210ENST00000557026 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
NEK9-210ENST00000557026 SLC52A1Q9NWF4 448 aa14.8□□□□□ -0.04
NEK9-210ENST00000557026 IGF1RP08069 1367 aa14.8□□□□□ -0.04
NEK9-210ENST00000557026 HFM1A2PYH4 1435 aa14.8□□□□□ -0.04
NEK9-210ENST00000557026 CCDC47Q96A33 483 aaKnown RBP14.8□□□□□ -0.04
NEK9-210ENST00000557026 NBR1Q14596 966 aa14.8□□□□□ -0.04
NEK9-210ENST00000557026 ST18O60284 1047 aa14.79□□□□□ -0.04
NEK9-210ENST00000557026 EFCAB5A4FU69 1503 aa14.79□□□□□ -0.04
NEK9-210ENST00000557026 PHF14O94880 888 aa14.79□□□□□ -0.04
NEK9-210ENST00000557026 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
NEK9-210ENST00000557026 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
NEK9-210ENST00000557026 KIF16BQ96L93 1317 aa14.79□□□□□ -0.04
NEK9-210ENST00000557026 RASSF8Q8NHQ8 419 aa14.79□□□□□ -0.04
NEK9-210ENST00000557026 MSH5O43196 834 aa14.78□□□□□ -0.04
NEK9-210ENST00000557026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
NEK9-210ENST00000557026 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
NEK9-210ENST00000557026 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
NEK9-210ENST00000557026 TPM2P07951 284 aa14.77□□□□□ -0.04
NEK9-210ENST00000557026 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.04
NEK9-210ENST00000557026 TCEAL9Q9UHQ7 104 aa14.77□□□□□ -0.05
NEK9-210ENST00000557026 CASKIN1Q8WXD9 1431 aa14.77□□□□□ -0.05
NEK9-210ENST00000557026 KIF21BO75037 1637 aa14.76□□□□□ -0.05
NEK9-210ENST00000557026 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
NEK9-210ENST00000557026 DRC7Q8IY82 874 aa14.76□□□□□ -0.05
NEK9-210ENST00000557026 GNAI1P63096 354 aa14.75□□□□□ -0.05
NEK9-210ENST00000557026 ZKSCAN2Q63HK3 967 aa14.75□□□□□ -0.05
NEK9-210ENST00000557026 SLC4A10Q6U841 1118 aa14.75□□□□□ -0.05
NEK9-210ENST00000557026 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
NEK9-210ENST00000557026 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
NEK9-210ENST00000557026 ARHGAP5Q13017 1502 aa14.74□□□□□ -0.05
NEK9-210ENST00000557026 CFTRP13569 1480 aa14.74□□□□□ -0.05
NEK9-210ENST00000557026 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
NEK9-210ENST00000557026 MFAP1P55081 439 aaKnown RBP14.73□□□□□ -0.05
NEK9-210ENST00000557026 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
NEK9-210ENST00000557026 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
NEK9-210ENST00000557026 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
NEK9-210ENST00000557026 C9orf78Q9NZ63 289 aaPredicted RBP14.73□□□□□ -0.05
NEK9-210ENST00000557026 RNF20Q5VTR2 975 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms