RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 PBX2P40425 430 aa16.89■□□□□ 0.29
CCDC175-205ENST00000556996 ARHGAP33O14559 1287 aa16.88■□□□□ 0.29
CCDC175-205ENST00000556996 MAP3K7O43318 606 aa16.88■□□□□ 0.29
CCDC175-205ENST00000556996 DMRTA1Q5VZB9 504 aa16.88■□□□□ 0.29
CCDC175-205ENST00000556996 PTPREP23469 700 aa16.85■□□□□ 0.29
CCDC175-205ENST00000556996 C6orf132Q5T0Z8 1188 aa16.85■□□□□ 0.29
CCDC175-205ENST00000556996 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
CCDC175-205ENST00000556996 COL9A1P20849 921 aa16.84■□□□□ 0.29
CCDC175-205ENST00000556996 LSM11P83369 360 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCDC175-205ENST00000556996 PCDH10Q9P2E7 1040 aa16.82■□□□□ 0.28
CCDC175-205ENST00000556996 RBM26Q5T8P6 1007 aaKnown RBP16.81■□□□□ 0.28
CCDC175-205ENST00000556996 PPP1R3GB7ZBB8 358 aa16.77■□□□□ 0.28
CCDC175-205ENST00000556996 KCNH8Q96L42 1107 aa16.77■□□□□ 0.28
CCDC175-205ENST00000556996 ANKRD13DQ6ZTN6 518 aa16.76■□□□□ 0.27
CCDC175-205ENST00000556996 SMYD5Q6GMV2 418 aa16.75■□□□□ 0.27
CCDC175-205ENST00000556996 ZBED2Q9BTP6 218 aa16.74■□□□□ 0.27
CCDC175-205ENST00000556996 PROX2Q3B8N5 592 aa16.72■□□□□ 0.27
CCDC175-205ENST00000556996 NPDC1Q9NQX5 325 aaPredicted RBP16.72■□□□□ 0.27
CCDC175-205ENST00000556996 NUTM2FA1L443 756 aa16.7■□□□□ 0.26
CCDC175-205ENST00000556996 ADGRD1Q6QNK2 874 aa16.7■□□□□ 0.26
CCDC175-205ENST00000556996 VPS9D1Q9Y2B5 631 aa16.69■□□□□ 0.26
CCDC175-205ENST00000556996 TK2O00142 265 aa16.66■□□□□ 0.26
CCDC175-205ENST00000556996 PTGDRQ13258 359 aa16.66■□□□□ 0.26
CCDC175-205ENST00000556996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC175-205ENST00000556996 SLC4A5Q9BY07 1137 aa16.66■□□□□ 0.26
CCDC175-205ENST00000556996 GPR37O15354 613 aa16.65■□□□□ 0.26
CCDC175-205ENST00000556996 BCANQ96GW7 911 aa16.65■□□□□ 0.26
CCDC175-205ENST00000556996 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
CCDC175-205ENST00000556996 TULP1O00294 542 aaPredicted RBP16.62■□□□□ 0.25
CCDC175-205ENST00000556996 HRO43593 1189 aa16.62■□□□□ 0.25
CCDC175-205ENST00000556996 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
CCDC175-205ENST00000556996 SPNS2Q8IVW8 549 aa16.62■□□□□ 0.25
CCDC175-205ENST00000556996 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
CCDC175-205ENST00000556996 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
CCDC175-205ENST00000556996 GPIHBP1Q8IV16 184 aa16.61■□□□□ 0.25
CCDC175-205ENST00000556996 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
CCDC175-205ENST00000556996 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
CCDC175-205ENST00000556996 PRSS12P56730 875 aa16.6■□□□□ 0.25
CCDC175-205ENST00000556996 PADI6Q6TGC4 694 aa16.59■□□□□ 0.25
CCDC175-205ENST00000556996 FCHSD2O94868 740 aa16.57■□□□□ 0.24
CCDC175-205ENST00000556996 C3orf80F5H4A9 247 aa16.56■□□□□ 0.24
CCDC175-205ENST00000556996 KIAA1468Q9P260 1216 aa16.56■□□□□ 0.24
CCDC175-205ENST00000556996 BHMG1C9JSJ3 638 aaPredicted RBP16.55■□□□□ 0.24
CCDC175-205ENST00000556996 TTC13Q8NBP0 860 aa16.54■□□□□ 0.24
CCDC175-205ENST00000556996 RABGEF1Q9UJ41 708 aa16.54■□□□□ 0.24
CCDC175-205ENST00000556996 FECHP22830 423 aa16.53■□□□□ 0.24
CCDC175-205ENST00000556996 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
CCDC175-205ENST00000556996 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
CCDC175-205ENST00000556996 HIC1Q14526 733 aa16.5■□□□□ 0.23
CCDC175-205ENST00000556996 SEPT9Q9UHD8 586 aaPredicted RBP16.5■□□□□ 0.23
CCDC175-205ENST00000556996 SMAPO00193 183 aa16.47■□□□□ 0.23
CCDC175-205ENST00000556996 GNPATO15228 680 aa16.47■□□□□ 0.23
CCDC175-205ENST00000556996 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
CCDC175-205ENST00000556996 PACS2Q86VP3 889 aa16.46■□□□□ 0.23
CCDC175-205ENST00000556996 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
CCDC175-205ENST00000556996 MMRN1Q13201 1228 aa16.45■□□□□ 0.22
CCDC175-205ENST00000556996 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
CCDC175-205ENST00000556996 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
CCDC175-205ENST00000556996 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
CCDC175-205ENST00000556996 TATDN2Q93075 761 aa16.43■□□□□ 0.22
CCDC175-205ENST00000556996 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
CCDC175-205ENST00000556996 NBPF26B4DH59 902 aa16.42■□□□□ 0.22
CCDC175-205ENST00000556996 NUDT18Q6ZVK8 323 aa16.42■□□□□ 0.22
CCDC175-205ENST00000556996 STAC3Q96MF2 364 aa16.4■□□□□ 0.22
CCDC175-205ENST00000556996 ADGRG1Q9Y653 693 aa16.4■□□□□ 0.22
CCDC175-205ENST00000556996 PLSCR2Q9NRY7 297 aa16.38■□□□□ 0.21
CCDC175-205ENST00000556996 FAM98CQ17RN3 349 aaKnown RBP16.36■□□□□ 0.21
CCDC175-205ENST00000556996 LAPTM4BQ86VI4 370 aa16.36■□□□□ 0.21
CCDC175-205ENST00000556996 RNF166Q96A37 237 aaPredicted RBP16.36■□□□□ 0.21
CCDC175-205ENST00000556996 EYA1Q99502 592 aa16.36■□□□□ 0.21
CCDC175-205ENST00000556996 ZFRQ96KR1 1074 aaKnown RBP16.34■□□□□ 0.21
CCDC175-205ENST00000556996 ZMYND10O75800 440 aa16.33■□□□□ 0.2
CCDC175-205ENST00000556996 KCTD12Q96CX2 325 aaKnown RBP16.33■□□□□ 0.2
CCDC175-205ENST00000556996 MAP2K5Q13163 448 aa16.31■□□□□ 0.2
CCDC175-205ENST00000556996 GOLGA8CPA6NN73 597 aa16.3■□□□□ 0.2
CCDC175-205ENST00000556996 WNT2BQ93097 391 aa16.3■□□□□ 0.2
CCDC175-205ENST00000556996 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
CCDC175-205ENST00000556996 PXYLP1Q8TE99 480 aa16.29■□□□□ 0.2
CCDC175-205ENST00000556996 METTL3Q86U44 580 aaKnown RBP16.28■□□□□ 0.2
CCDC175-205ENST00000556996 RBM46Q8TBY0 533 aaKnown RBP16.28■□□□□ 0.2
CCDC175-205ENST00000556996 PHOX2BQ99453 314 aa16.27■□□□□ 0.2
CCDC175-205ENST00000556996 BCAMP50895 628 aa16.26■□□□□ 0.19
CCDC175-205ENST00000556996 THSD4Q6ZMP0 1018 aa16.25■□□□□ 0.19
CCDC175-205ENST00000556996 SAMD7Q7Z3H4 446 aa16.25■□□□□ 0.19
CCDC175-205ENST00000556996 ANKK1Q8NFD2 765 aa16.25■□□□□ 0.19
CCDC175-205ENST00000556996 NLRP7Q8WX94 980 aa16.25■□□□□ 0.19
CCDC175-205ENST00000556996 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
CCDC175-205ENST00000556996 IRF6O14896 467 aa16.24■□□□□ 0.19
CCDC175-205ENST00000556996 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
CCDC175-205ENST00000556996 RCCD1A6NED2 376 aa16.23■□□□□ 0.19
CCDC175-205ENST00000556996 OATP04181 439 aa16.23■□□□□ 0.19
CCDC175-205ENST00000556996 SWT1Q5T5J6 900 aaKnown RBP16.21■□□□□ 0.19
CCDC175-205ENST00000556996 SOWAHBA6NEL2 793 aa16.2■□□□□ 0.18
CCDC175-205ENST00000556996 DNAJB2P25686 324 aa16.2■□□□□ 0.18
CCDC175-205ENST00000556996 KRI1Q8N9T8 703 aaKnown RBP16.19■□□□□ 0.18
CCDC175-205ENST00000556996 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
CCDC175-205ENST00000556996 TMEM134Q9H6X4 195 aa16.18■□□□□ 0.18
CCDC175-205ENST00000556996 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
CCDC175-205ENST00000556996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.16■□□□□ 0.18
CCDC175-205ENST00000556996 PTPN5P54829 565 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms