RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
RDH11-208ENST00000556692 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
RDH11-208ENST00000556692 ZNF775Q96BV0 537 aaPredicted RBP9.63□□□□□ -0.87
RDH11-208ENST00000556692 SEPT9Q9UHD8 586 aaPredicted RBP9.63□□□□□ -0.87
RDH11-208ENST00000556692 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
RDH11-208ENST00000556692 PKD2Q13563 968 aa9.62□□□□□ -0.87
RDH11-208ENST00000556692 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
RDH11-208ENST00000556692 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
RDH11-208ENST00000556692 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
RDH11-208ENST00000556692 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
RDH11-208ENST00000556692 PDE4AP27815 886 aa9.59□□□□□ -0.87
RDH11-208ENST00000556692 FBXW7Q969H0 707 aa9.57□□□□□ -0.88
RDH11-208ENST00000556692 ONECUT3O60422 494 aaPredicted RBP9.56□□□□□ -0.88
RDH11-208ENST00000556692 FAM98CQ17RN3 349 aaKnown RBP9.56□□□□□ -0.88
RDH11-208ENST00000556692 TYW1BQ6NUM6 668 aa9.56□□□□□ -0.88
RDH11-208ENST00000556692 HS6ST3Q8IZP7 471 aa9.56□□□□□ -0.88
RDH11-208ENST00000556692 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
RDH11-208ENST00000556692 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
RDH11-208ENST00000556692 NCKAP5LQ9HCH0 1330 aa9.54□□□□□ -0.88
RDH11-208ENST00000556692 PPP4CP60510 307 aa9.53□□□□□ -0.88
RDH11-208ENST00000556692 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
RDH11-208ENST00000556692 PHF14O94880 888 aa9.52□□□□□ -0.89
RDH11-208ENST00000556692 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
RDH11-208ENST00000556692 TJAP1Q5JTD0 557 aa9.51□□□□□ -0.89
RDH11-208ENST00000556692 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
RDH11-208ENST00000556692 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
RDH11-208ENST00000556692 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
RDH11-208ENST00000556692 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
RDH11-208ENST00000556692 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
RDH11-208ENST00000556692 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
RDH11-208ENST00000556692 IL21Q9HBE4 155 aa9.47□□□□□ -0.89
RDH11-208ENST00000556692 MTRQ99707 1265 aa9.46□□□□□ -0.9
RDH11-208ENST00000556692 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
RDH11-208ENST00000556692 EPAS1Q99814 870 aa9.44□□□□□ -0.9
RDH11-208ENST00000556692 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
RDH11-208ENST00000556692 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
RDH11-208ENST00000556692 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
RDH11-208ENST00000556692 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
RDH11-208ENST00000556692 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
RDH11-208ENST00000556692 GGCXP38435 758 aa9.39□□□□□ -0.91
RDH11-208ENST00000556692 MFSD10Q14728 455 aa9.38□□□□□ -0.91
RDH11-208ENST00000556692 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
RDH11-208ENST00000556692 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
RDH11-208ENST00000556692 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
RDH11-208ENST00000556692 POTECB2RU33 542 aa9.35□□□□□ -0.91
RDH11-208ENST00000556692 RNF40O75150 1001 aa9.35□□□□□ -0.91
RDH11-208ENST00000556692 SMAPO00193 183 aa9.34□□□□□ -0.91
RDH11-208ENST00000556692 MYT1Q01538 1121 aa9.34□□□□□ -0.91
RDH11-208ENST00000556692 DNAJC5Q9H3Z4 198 aa9.34□□□□□ -0.91
RDH11-208ENST00000556692 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
RDH11-208ENST00000556692 DGAT1O75907 488 aa9.32□□□□□ -0.92
RDH11-208ENST00000556692 DDX12PQ92771 950 aa9.32□□□□□ -0.92
RDH11-208ENST00000556692 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
RDH11-208ENST00000556692 MAP3K7O43318 606 aa9.3□□□□□ -0.92
RDH11-208ENST00000556692 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
RDH11-208ENST00000556692 APLP1P51693 650 aa9.29□□□□□ -0.92
RDH11-208ENST00000556692 COPS2P61201 443 aa9.29□□□□□ -0.92
RDH11-208ENST00000556692 TRIM67Q6ZTA4 783 aa9.29□□□□□ -0.92
RDH11-208ENST00000556692 DPYSL4O14531 572 aa9.28□□□□□ -0.92
RDH11-208ENST00000556692 SLC19A1P41440 591 aa9.28□□□□□ -0.92
RDH11-208ENST00000556692 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
RDH11-208ENST00000556692 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
RDH11-208ENST00000556692 FAM187AA6NFU0 413 aa9.26□□□□□ -0.93
RDH11-208ENST00000556692 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
RDH11-208ENST00000556692 NBR1Q14596 966 aa9.26□□□□□ -0.93
RDH11-208ENST00000556692 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
RDH11-208ENST00000556692 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
RDH11-208ENST00000556692 TATDN2Q93075 761 aa9.25□□□□□ -0.93
RDH11-208ENST00000556692 PRSS12P56730 875 aa9.24□□□□□ -0.93
RDH11-208ENST00000556692 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
RDH11-208ENST00000556692 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
RDH11-208ENST00000556692 PRR20EP86478 221 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 PRR20CP86479 221 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 PRR20DP86480 221 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 PRR20BP86481 221 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 PRR20AP86496 221 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 ZNF598Q86UK7 904 aaKnown RBP9.22□□□□□ -0.93
RDH11-208ENST00000556692 NECTIN2Q92692 538 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
RDH11-208ENST00000556692 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
RDH11-208ENST00000556692 ZPR1O75312 459 aa9.21□□□□□ -0.94
RDH11-208ENST00000556692 SPRYD7Q5W111 196 aa9.21□□□□□ -0.94
RDH11-208ENST00000556692 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
RDH11-208ENST00000556692 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
RDH11-208ENST00000556692 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
RDH11-208ENST00000556692 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
RDH11-208ENST00000556692 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
RDH11-208ENST00000556692 WFS1O76024 890 aa9.18□□□□□ -0.94
RDH11-208ENST00000556692 ZNF697Q5TEC3 545 aa9.18□□□□□ -0.94
RDH11-208ENST00000556692 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
RDH11-208ENST00000556692 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
RDH11-208ENST00000556692 EMID1Q96A84 441 aaPredicted RBP9.18□□□□□ -0.94
RDH11-208ENST00000556692 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
RDH11-208ENST00000556692 AAASQ9NRG9 546 aa9.16□□□□□ -0.94
RDH11-208ENST00000556692 CADPS2Q86UW7 1296 aa9.15□□□□□ -0.94
RDH11-208ENST00000556692 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
RDH11-208ENST00000556692 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
RDH11-208ENST00000556692 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
RDH11-208ENST00000556692 SWT1Q5T5J6 900 aaKnown RBP9.13□□□□□ -0.95
RDH11-208ENST00000556692 LIAT1Q6ZQX7 453 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms