RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 PDE4DQ08499 809 aa7.94□□□□□ -1.14
GPHN-214ENST00000556633 GPR153Q6NV75 609 aa7.94□□□□□ -1.14
GPHN-214ENST00000556633 GPBP1L1Q9HC44 474 aaPredicted RBP7.94□□□□□ -1.14
GPHN-214ENST00000556633 NPDC1Q9NQX5 325 aaPredicted RBP7.93□□□□□ -1.14
GPHN-214ENST00000556633 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
GPHN-214ENST00000556633 SNPHO15079 494 aa7.91□□□□□ -1.14
GPHN-214ENST00000556633 KDM4CQ9H3R0 1056 aa7.91□□□□□ -1.14
GPHN-214ENST00000556633 LHX6Q9UPM6 363 aa7.9□□□□□ -1.14
GPHN-214ENST00000556633 C6orf132Q5T0Z8 1188 aa7.89□□□□□ -1.15
GPHN-214ENST00000556633 ADAM33Q9BZ11 813 aa7.89□□□□□ -1.15
GPHN-214ENST00000556633 AMHR2Q16671 573 aa7.88□□□□□ -1.15
GPHN-214ENST00000556633 GTF3C3Q9Y5Q9 886 aa7.88□□□□□ -1.15
GPHN-214ENST00000556633 PPP4R3BQ5MIZ7 849 aa7.87□□□□□ -1.15
GPHN-214ENST00000556633 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
GPHN-214ENST00000556633 OTUD5Q96G74 571 aa7.87□□□□□ -1.15
GPHN-214ENST00000556633 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
GPHN-214ENST00000556633 PARP9Q8IXQ6 854 aa7.86□□□□□ -1.15
GPHN-214ENST00000556633 PSDA5PKW4 1024 aaPredicted RBP7.85□□□□□ -1.15
GPHN-214ENST00000556633 TTLL12Q14166 644 aaPredicted RBP7.85□□□□□ -1.15
GPHN-214ENST00000556633 PADI6Q6TGC4 694 aa7.85□□□□□ -1.15
GPHN-214ENST00000556633 IL27Q8NEV9 243 aa7.85□□□□□ -1.15
GPHN-214ENST00000556633 FAM161AQ3B820 660 aa7.83□□□□□ -1.16
GPHN-214ENST00000556633 LHX8Q68G74 356 aa7.83□□□□□ -1.16
GPHN-214ENST00000556633 BCL2L12Q9HB09 334 aa7.83□□□□□ -1.16
GPHN-214ENST00000556633 DAXXQ9UER7 740 aaPredicted RBP7.83□□□□□ -1.16
GPHN-214ENST00000556633 PRSS12P56730 875 aa7.82□□□□□ -1.16
GPHN-214ENST00000556633 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
GPHN-214ENST00000556633 RBM27Q9P2N5 1060 aaKnown RBP7.82□□□□□ -1.16
GPHN-214ENST00000556633 COL9A1P20849 921 aa7.81□□□□□ -1.16
GPHN-214ENST00000556633 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
GPHN-214ENST00000556633 PHOX2BQ99453 314 aa7.81□□□□□ -1.16
GPHN-214ENST00000556633 OATP04181 439 aa7.8□□□□□ -1.16
GPHN-214ENST00000556633 PTPREP23469 700 aa7.8□□□□□ -1.16
GPHN-214ENST00000556633 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
GPHN-214ENST00000556633 METTL3Q86U44 580 aaKnown RBP7.8□□□□□ -1.16
GPHN-214ENST00000556633 TTC13Q8NBP0 860 aa7.8□□□□□ -1.16
GPHN-214ENST00000556633 CDCA7LQ96GN5 454 aa7.8□□□□□ -1.16
GPHN-214ENST00000556633 ADGRG1Q9Y653 693 aa7.8□□□□□ -1.16
GPHN-214ENST00000556633 PPP1R3GB7ZBB8 358 aa7.79□□□□□ -1.16
GPHN-214ENST00000556633 CLCN1P35523 988 aa7.79□□□□□ -1.16
GPHN-214ENST00000556633 DDRGK1Q96HY6 314 aa7.79□□□□□ -1.16
GPHN-214ENST00000556633 REPIN1Q9BWE0 567 aaKnown RBP7.79□□□□□ -1.16
GPHN-214ENST00000556633 PXYLP1Q8TE99 480 aa7.78□□□□□ -1.16
GPHN-214ENST00000556633 GPCPD1Q9NPB8 672 aa7.78□□□□□ -1.16
GPHN-214ENST00000556633 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
GPHN-214ENST00000556633 PLEKHG3A1L390 1219 aa7.76□□□□□ -1.17
GPHN-214ENST00000556633 MS4A1P11836 297 aa7.76□□□□□ -1.17
GPHN-214ENST00000556633 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
GPHN-214ENST00000556633 KCNK17Q96T54 332 aa7.76□□□□□ -1.17
GPHN-214ENST00000556633 TMUB1Q9BVT8 246 aa7.76□□□□□ -1.17
GPHN-214ENST00000556633 FAM198AQ9UFP1 575 aa7.76□□□□□ -1.17
GPHN-214ENST00000556633 KCNH8Q96L42 1107 aa7.75□□□□□ -1.17
GPHN-214ENST00000556633 TSKSQ9UJT2 592 aa7.75□□□□□ -1.17
GPHN-214ENST00000556633 TIMELESSQ9UNS1 1208 aa7.75□□□□□ -1.17
GPHN-214ENST00000556633 ERBB3P21860 1342 aa7.75□□□□□ -1.17
GPHN-214ENST00000556633 TRIM6-TRIM34B2RNG4 842 aa7.73□□□□□ -1.17
GPHN-214ENST00000556633 ST18O60284 1047 aa7.73□□□□□ -1.17
GPHN-214ENST00000556633 SSTR3P32745 418 aaPredicted RBP7.73□□□□□ -1.17
GPHN-214ENST00000556633 VARS2Q5ST30 1063 aaKnown RBP7.73□□□□□ -1.17
GPHN-214ENST00000556633 NBPF26B4DH59 902 aa7.72□□□□□ -1.17
GPHN-214ENST00000556633 PROX2Q3B8N5 592 aa7.72□□□□□ -1.17
GPHN-214ENST00000556633 NUDT18Q6ZVK8 323 aa7.72□□□□□ -1.17
GPHN-214ENST00000556633 PACS2Q86VP3 889 aa7.72□□□□□ -1.17
GPHN-214ENST00000556633 FAM217BQ9NTX9 383 aaPredicted RBP7.72□□□□□ -1.17
GPHN-214ENST00000556633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.71□□□□□ -1.18
GPHN-214ENST00000556633 C3orf80F5H4A9 247 aa7.71□□□□□ -1.18
GPHN-214ENST00000556633 EMP3P54852 163 aa7.71□□□□□ -1.18
GPHN-214ENST00000556633 ERICH6Q7L0X2 663 aa7.71□□□□□ -1.18
GPHN-214ENST00000556633 MARVELD3Q96A59 401 aa7.71□□□□□ -1.18
GPHN-214ENST00000556633 EYA1Q99502 592 aa7.71□□□□□ -1.18
GPHN-214ENST00000556633 PNMA3Q9UL41 463 aa7.71□□□□□ -1.18
GPHN-214ENST00000556633 RCCD1A6NED2 376 aa7.7□□□□□ -1.18
GPHN-214ENST00000556633 PSEN2P49810 448 aa7.7□□□□□ -1.18
GPHN-214ENST00000556633 TATDN2Q93075 761 aa7.7□□□□□ -1.18
GPHN-214ENST00000556633 C14orf37Q86TY3 774 aa7.69□□□□□ -1.18
GPHN-214ENST00000556633 ZBED2Q9BTP6 218 aa7.69□□□□□ -1.18
GPHN-214ENST00000556633 BEGAINQ9BUH8 593 aa7.69□□□□□ -1.18
GPHN-214ENST00000556633 ARHGAP33O14559 1287 aa7.68□□□□□ -1.18
GPHN-214ENST00000556633 ONECUT3O60422 494 aaPredicted RBP7.68□□□□□ -1.18
GPHN-214ENST00000556633 DNAJB2P25686 324 aa7.68□□□□□ -1.18
GPHN-214ENST00000556633 AXIN2Q9Y2T1 843 aa7.68□□□□□ -1.18
GPHN-214ENST00000556633 SMAPO00193 183 aa7.67□□□□□ -1.18
GPHN-214ENST00000556633 POTEEQ6S8J3 1075 aa7.67□□□□□ -1.18
GPHN-214ENST00000556633 FAM163AQ96GL9 167 aaPredicted RBP7.67□□□□□ -1.18
GPHN-214ENST00000556633 GOPCQ9HD26 462 aa7.67□□□□□ -1.18
GPHN-214ENST00000556633 KIAA1468Q9P260 1216 aa7.67□□□□□ -1.18
GPHN-214ENST00000556633 FAM205CA6NFA0 338 aa7.66□□□□□ -1.18
GPHN-214ENST00000556633 DMRTA1Q5VZB9 504 aa7.66□□□□□ -1.18
GPHN-214ENST00000556633 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
GPHN-214ENST00000556633 PBX2P40425 430 aa7.65□□□□□ -1.18
GPHN-214ENST00000556633 SH3D19Q5HYK7 790 aa7.65□□□□□ -1.18
GPHN-214ENST00000556633 PCMTD1Q96MG8 357 aaPredicted RBP7.65□□□□□ -1.18
GPHN-214ENST00000556633 RSPH6AQ9H0K4 717 aa7.65□□□□□ -1.18
GPHN-214ENST00000556633 SULF1Q8IWU6 871 aa7.64□□□□□ -1.19
GPHN-214ENST00000556633 ZNF687Q8N1G0 1237 aa7.64□□□□□ -1.19
GPHN-214ENST00000556633 RABGEF1Q9UJ41 708 aa7.64□□□□□ -1.19
GPHN-214ENST00000556633 DDX11L8A8MPP1 907 aa7.63□□□□□ -1.19
GPHN-214ENST00000556633 SLC4A5Q9BY07 1137 aa7.63□□□□□ -1.19
GPHN-214ENST00000556633 CD46P15529 392 aa7.62□□□□□ -1.19
GPHN-214ENST00000556633 SKIV2LQ15477 1246 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms