RNA–Protein interactions for RNA: ENST00000556619.5

PAPOLA-221, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-221ENST00000556619 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
PAPOLA-221ENST00000556619 GNPATO15228 680 aa11.31□□□□□ -0.6
PAPOLA-221ENST00000556619 FECHP22830 423 aa11.31□□□□□ -0.6
PAPOLA-221ENST00000556619 EMP3P54852 163 aa11.31□□□□□ -0.6
PAPOLA-221ENST00000556619 HIC1Q14526 733 aa11.31□□□□□ -0.6
PAPOLA-221ENST00000556619 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
PAPOLA-221ENST00000556619 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
PAPOLA-221ENST00000556619 ERBB3P21860 1342 aa11.29□□□□□ -0.6
PAPOLA-221ENST00000556619 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
PAPOLA-221ENST00000556619 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
PAPOLA-221ENST00000556619 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
PAPOLA-221ENST00000556619 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
PAPOLA-221ENST00000556619 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
PAPOLA-221ENST00000556619 COL9A1P20849 921 aa11.24□□□□□ -0.61
PAPOLA-221ENST00000556619 PTPREP23469 700 aa11.24□□□□□ -0.61
PAPOLA-221ENST00000556619 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
PAPOLA-221ENST00000556619 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
PAPOLA-221ENST00000556619 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
PAPOLA-221ENST00000556619 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
PAPOLA-221ENST00000556619 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
PAPOLA-221ENST00000556619 AK7Q96M32 723 aa11.22□□□□□ -0.61
PAPOLA-221ENST00000556619 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
PAPOLA-221ENST00000556619 IRF6O14896 467 aa11.2□□□□□ -0.62
PAPOLA-221ENST00000556619 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 TRIM66O15016 1216 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 PSEN2P49810 448 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 PRSS12P56730 875 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
PAPOLA-221ENST00000556619 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
PAPOLA-221ENST00000556619 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
PAPOLA-221ENST00000556619 KCNH8Q96L42 1107 aa11.17□□□□□ -0.62
PAPOLA-221ENST00000556619 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
PAPOLA-221ENST00000556619 TTC13Q8NBP0 860 aa11.15□□□□□ -0.62
PAPOLA-221ENST00000556619 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
PAPOLA-221ENST00000556619 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
PAPOLA-221ENST00000556619 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
PAPOLA-221ENST00000556619 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
PAPOLA-221ENST00000556619 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
PAPOLA-221ENST00000556619 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
PAPOLA-221ENST00000556619 PDE4DQ08499 809 aa11.12□□□□□ -0.63
PAPOLA-221ENST00000556619 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
PAPOLA-221ENST00000556619 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
PAPOLA-221ENST00000556619 TRIM6-TRIM34B2RNG4 842 aa11.11□□□□□ -0.63
PAPOLA-221ENST00000556619 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
PAPOLA-221ENST00000556619 GPBP1L1Q9HC44 474 aaPredicted RBP11.11□□□□□ -0.63
PAPOLA-221ENST00000556619 PBX2P40425 430 aa11.1□□□□□ -0.63
PAPOLA-221ENST00000556619 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
PAPOLA-221ENST00000556619 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
PAPOLA-221ENST00000556619 AMHR2Q16671 573 aa11.09□□□□□ -0.63
PAPOLA-221ENST00000556619 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
PAPOLA-221ENST00000556619 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
PAPOLA-221ENST00000556619 OATP04181 439 aa11.07□□□□□ -0.64
PAPOLA-221ENST00000556619 TTLL12Q14166 644 aaPredicted RBP11.07□□□□□ -0.64
PAPOLA-221ENST00000556619 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
PAPOLA-221ENST00000556619 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
PAPOLA-221ENST00000556619 NUDT18Q6ZVK8 323 aa11.06□□□□□ -0.64
PAPOLA-221ENST00000556619 PARP9Q8IXQ6 854 aa11.06□□□□□ -0.64
PAPOLA-221ENST00000556619 PACS2Q86VP3 889 aa11.05□□□□□ -0.64
PAPOLA-221ENST00000556619 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
PAPOLA-221ENST00000556619 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
PAPOLA-221ENST00000556619 SMAPO00193 183 aa11.04□□□□□ -0.64
PAPOLA-221ENST00000556619 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
PAPOLA-221ENST00000556619 TATDN2Q93075 761 aa11.04□□□□□ -0.64
PAPOLA-221ENST00000556619 KDM4CQ9H3R0 1056 aa11.04□□□□□ -0.64
PAPOLA-221ENST00000556619 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
PAPOLA-221ENST00000556619 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.65
PAPOLA-221ENST00000556619 EYA1Q99502 592 aa11.02□□□□□ -0.65
PAPOLA-221ENST00000556619 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
PAPOLA-221ENST00000556619 SLC4A5Q9BY07 1137 aa11.02□□□□□ -0.65
PAPOLA-221ENST00000556619 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
PAPOLA-221ENST00000556619 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
PAPOLA-221ENST00000556619 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
PAPOLA-221ENST00000556619 RCCD1A6NED2 376 aa11□□□□□ -0.65
PAPOLA-221ENST00000556619 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
PAPOLA-221ENST00000556619 SEPT9Q9UHD8 586 aaPredicted RBP11□□□□□ -0.65
PAPOLA-221ENST00000556619 CLCN1P35523 988 aa10.99□□□□□ -0.65
PAPOLA-221ENST00000556619 GPCPD1Q9NPB8 672 aa10.99□□□□□ -0.65
PAPOLA-221ENST00000556619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.97□□□□□ -0.65
PAPOLA-221ENST00000556619 ADGRD1Q6QNK2 874 aa10.97□□□□□ -0.65
PAPOLA-221ENST00000556619 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
PAPOLA-221ENST00000556619 TK2O00142 265 aa10.96□□□□□ -0.65
PAPOLA-221ENST00000556619 DNAJB2P25686 324 aa10.96□□□□□ -0.65
PAPOLA-221ENST00000556619 MS4A1P11836 297 aa10.95□□□□□ -0.66
PAPOLA-221ENST00000556619 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
PAPOLA-221ENST00000556619 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
PAPOLA-221ENST00000556619 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
PAPOLA-221ENST00000556619 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
PAPOLA-221ENST00000556619 FAM117AQ9C073 453 aa10.94□□□□□ -0.66
PAPOLA-221ENST00000556619 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
PAPOLA-221ENST00000556619 TMEM134Q9H6X4 195 aa10.94□□□□□ -0.66
PAPOLA-221ENST00000556619 POTEMA6NI47 508 aa10.93□□□□□ -0.66
PAPOLA-221ENST00000556619 FAM217BQ9NTX9 383 aaPredicted RBP10.93□□□□□ -0.66
PAPOLA-221ENST00000556619 BHMG1C9JSJ3 638 aaPredicted RBP10.92□□□□□ -0.66
PAPOLA-221ENST00000556619 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
PAPOLA-221ENST00000556619 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
PAPOLA-221ENST00000556619 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms