RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 PLEKHH2Q8IVE3 1493 aa7.55□□□□□ -1.2
GPHN-213ENST00000556501 NBPF8Q3BBV2 869 aa7.55□□□□□ -1.2
GPHN-213ENST00000556501 ZNF777Q9ULD5 760 aaPredicted RBP7.55□□□□□ -1.2
GPHN-213ENST00000556501 IQGAP3Q86VI3 1631 aa7.55□□□□□ -1.2
GPHN-213ENST00000556501 UHRF1BP1LA0JNW5 1464 aa7.55□□□□□ -1.2
GPHN-213ENST00000556501 ARHGAP5Q13017 1502 aa7.54□□□□□ -1.2
GPHN-213ENST00000556501 FAM135AQ9P2D6 1515 aa7.54□□□□□ -1.2
GPHN-213ENST00000556501 BCORL1Q5H9F3 1711 aa7.54□□□□□ -1.2
GPHN-213ENST00000556501 MAGI2Q86UL8 1455 aa7.53□□□□□ -1.2
GPHN-213ENST00000556501 NUP155O75694 1391 aa7.52□□□□□ -1.21
GPHN-213ENST00000556501 PKD2Q13563 968 aa7.52□□□□□ -1.21
GPHN-213ENST00000556501 LAMC1P11047 1609 aa7.52□□□□□ -1.21
GPHN-213ENST00000556501 ABCC1P33527 1531 aa7.52□□□□□ -1.21
GPHN-213ENST00000556501 ARAP3Q8WWN8 1544 aa7.52□□□□□ -1.21
GPHN-213ENST00000556501 E9PCH4 1651 aa7.51□□□□□ -1.21
GPHN-213ENST00000556501 C1QBPQ07021 282 aaKnown RBP7.51□□□□□ -1.21
GPHN-213ENST00000556501 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
GPHN-213ENST00000556501 TRPM1Q7Z4N2 1603 aa7.51□□□□□ -1.21
GPHN-213ENST00000556501 DUOX2Q9NRD8 1548 aa7.51□□□□□ -1.21
GPHN-213ENST00000556501 KIF7Q2M1P5 1343 aa7.51□□□□□ -1.21
GPHN-213ENST00000556501 USP47Q96K76 1375 aa7.5□□□□□ -1.21
GPHN-213ENST00000556501 C11orf95C9JLR9 678 aaPredicted RBP7.5□□□□□ -1.21
GPHN-213ENST00000556501 TSPY4P0CV99 314 aa7.5□□□□□ -1.21
GPHN-213ENST00000556501 TSPY10P0CW01 314 aa7.5□□□□□ -1.21
GPHN-213ENST00000556501 HNRNPMP52272 730 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPHN-213ENST00000556501 ERBINQ96RT1 1412 aa7.49□□□□□ -1.21
GPHN-213ENST00000556501 ARID4BQ4LE39 1312 aaPredicted RBP7.49□□□□□ -1.21
GPHN-213ENST00000556501 EIF2AK4Q9P2K8 1649 aaKnown RBP7.49□□□□□ -1.21
GPHN-213ENST00000556501 PLCH2O75038 1416 aa7.48□□□□□ -1.21
GPHN-213ENST00000556501 RNF17Q9BXT8 1623 aaKnown RBP7.48□□□□□ -1.21
GPHN-213ENST00000556501 ATP10AO60312 1499 aa7.48□□□□□ -1.21
GPHN-213ENST00000556501 DHX29Q7Z478 1369 aaKnown RBP7.47□□□□□ -1.21
GPHN-213ENST00000556501 PRKRIP1Q9H875 184 aaPredicted RBP7.47□□□□□ -1.21
GPHN-213ENST00000556501 DEPDC5O75140 1603 aa7.47□□□□□ -1.21
GPHN-213ENST00000556501 ABCA9Q8IUA7 1624 aa7.47□□□□□ -1.21
GPHN-213ENST00000556501 ZFYVE16Q7Z3T8 1539 aa7.47□□□□□ -1.21
GPHN-213ENST00000556501 ROCK2O75116 1388 aaKnown RBP7.46□□□□□ -1.21
GPHN-213ENST00000556501 INO80Q9ULG1 1556 aaPredicted RBP7.46□□□□□ -1.21
GPHN-213ENST00000556501 PRAG1Q86YV5 1406 aa7.46□□□□□ -1.21
GPHN-213ENST00000556501 NEFLP07196 543 aa7.46□□□□□ -1.22
GPHN-213ENST00000556501 PLA2R1Q13018 1463 aa7.46□□□□□ -1.22
GPHN-213ENST00000556501 CCDC144AA2RUR9 1427 aa7.45□□□□□ -1.22
GPHN-213ENST00000556501 A2MP01023 1474 aa7.45□□□□□ -1.22
GPHN-213ENST00000556501 PRDM15P57071 1507 aaPredicted RBP7.45□□□□□ -1.22
GPHN-213ENST00000556501 CEP152O94986 1710 aa7.44□□□□□ -1.22
GPHN-213ENST00000556501 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
GPHN-213ENST00000556501 TET3O43151 1660 aa7.44□□□□□ -1.22
GPHN-213ENST00000556501 GPRASP1Q5JY77 1395 aa7.44□□□□□ -1.22
GPHN-213ENST00000556501 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
GPHN-213ENST00000556501 RTEL1-TNFRSF6BF6WH68 1400 aa7.44□□□□□ -1.22
GPHN-213ENST00000556501 WDR7Q9Y4E6 1490 aa7.43□□□□□ -1.22
GPHN-213ENST00000556501 TRPM2O94759 1503 aa7.43□□□□□ -1.22
GPHN-213ENST00000556501 VWDEQ8N2E2 1590 aa7.43□□□□□ -1.22
GPHN-213ENST00000556501 TRAPPC8Q9Y2L5 1435 aa7.43□□□□□ -1.22
GPHN-213ENST00000556501 MADDQ8WXG6 1647 aa7.42□□□□□ -1.22
GPHN-213ENST00000556501 IQGAP1P46940 1657 aa7.42□□□□□ -1.22
GPHN-213ENST00000556501 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
GPHN-213ENST00000556501 ZNF326Q5BKZ1 582 aaKnown RBP7.42□□□□□ -1.22
GPHN-213ENST00000556501 ZBED9Q6R2W3 1325 aa7.42□□□□□ -1.22
GPHN-213ENST00000556501 COL17A1Q9UMD9 1497 aaPredicted RBP7.42□□□□□ -1.22
GPHN-213ENST00000556501 ATP7AQ04656 1500 aa7.42□□□□□ -1.22
GPHN-213ENST00000556501 EFCAB2Q5VUJ9 269 aa7.41□□□□□ -1.22
GPHN-213ENST00000556501 CARD11Q9BXL7 1154 aa7.41□□□□□ -1.22
GPHN-213ENST00000556501 MRS2Q9HD23 443 aa7.41□□□□□ -1.22
GPHN-213ENST00000556501 KTN1Q86UP2 1357 aaKnown RBP7.41□□□□□ -1.22
GPHN-213ENST00000556501 NEURL4Q96JN8 1562 aa7.41□□□□□ -1.22
GPHN-213ENST00000556501 CLTCL1P53675 1640 aa7.41□□□□□ -1.22
GPHN-213ENST00000556501 TSHZ2Q9NRE2 1034 aa7.4□□□□□ -1.22
GPHN-213ENST00000556501 CFAP74Q9C0B2 1584 aa7.4□□□□□ -1.22
GPHN-213ENST00000556501 MROH1Q8NDA8 1641 aa7.4□□□□□ -1.22
GPHN-213ENST00000556501 KIAA1210Q9ULL0 1709 aa7.39□□□□□ -1.23
GPHN-213ENST00000556501 DCAF11Q8TEB1 546 aa7.39□□□□□ -1.23
GPHN-213ENST00000556501 BCANQ96GW7 911 aa7.39□□□□□ -1.23
GPHN-213ENST00000556501 FANCAO15360 1455 aa7.38□□□□□ -1.23
GPHN-213ENST00000556501 PTPRTO14522 1441 aa7.38□□□□□ -1.23
GPHN-213ENST00000556501 SMG6Q86US8 1419 aaKnown RBP7.37□□□□□ -1.23
GPHN-213ENST00000556501 BRD4O60885 1362 aaPredicted RBP7.37□□□□□ -1.23
GPHN-213ENST00000556501 SPAG9O60271 1321 aaKnown RBP7.37□□□□□ -1.23
GPHN-213ENST00000556501 ST20-MTHFSA0A0A6YYL1 179 aa7.37□□□□□ -1.23
GPHN-213ENST00000556501 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
GPHN-213ENST00000556501 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
GPHN-213ENST00000556501 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
GPHN-213ENST00000556501 IFT172Q9UG01 1749 aa7.37□□□□□ -1.23
GPHN-213ENST00000556501 EFCAB6Q5THR3 1501 aa7.37□□□□□ -1.23
GPHN-213ENST00000556501 ADGRL1O94910 1474 aa7.36□□□□□ -1.23
GPHN-213ENST00000556501 KIDINS220Q9ULH0 1771 aa7.36□□□□□ -1.23
GPHN-213ENST00000556501 LRPPRCP42704 1394 aaKnown RBP7.36□□□□□ -1.23
GPHN-213ENST00000556501 FAM9BQ8IZU0 186 aa7.36□□□□□ -1.23
GPHN-213ENST00000556501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.36□□□□□ -1.23
GPHN-213ENST00000556501 ZMYM4Q5VZL5 1548 aa7.36□□□□□ -1.23
GPHN-213ENST00000556501 ASXL2Q76L83 1435 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 PARD3Q8TEW0 1356 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 SYNMO15061 1565 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 PLCB2Q00722 1185 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 LMTK2Q8IWU2 1503 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 SCAPERQ9BY12 1400 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 MYOM1P52179 1685 aa7.35□□□□□ -1.23
GPHN-213ENST00000556501 PPRC1Q5VV67 1664 aaKnown RBP7.35□□□□□ -1.23
GPHN-213ENST00000556501 DISP3Q9P2K9 1392 aa7.34□□□□□ -1.23
GPHN-213ENST00000556501 KIF1BO60333 1816 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms