RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 PDIA6Q15084 440 aa8.41□□□□□ -1.06
ATXN3-238ENST00000556288 BCANQ96GW7 911 aa8.41□□□□□ -1.06
ATXN3-238ENST00000556288 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
ATXN3-238ENST00000556288 SEMA3EO15041 775 aa8.39□□□□□ -1.07
ATXN3-238ENST00000556288 PBX2P40425 430 aa8.39□□□□□ -1.07
ATXN3-238ENST00000556288 AXIN2Q9Y2T1 843 aa8.39□□□□□ -1.07
ATXN3-238ENST00000556288 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
ATXN3-238ENST00000556288 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
ATXN3-238ENST00000556288 ANO8Q9HCE9 1232 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-238ENST00000556288 KDM4FA0A1W2PPD8 638 aa8.36□□□□□ -1.07
ATXN3-238ENST00000556288 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
ATXN3-238ENST00000556288 DDX12PQ92771 950 aa8.35□□□□□ -1.07
ATXN3-238ENST00000556288 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-238ENST00000556288 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-238ENST00000556288 LHX6Q9UPM6 363 aa8.34□□□□□ -1.07
ATXN3-238ENST00000556288 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
ATXN3-238ENST00000556288 SMYD5Q6GMV2 418 aa8.33□□□□□ -1.08
ATXN3-238ENST00000556288 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
ATXN3-238ENST00000556288 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
ATXN3-238ENST00000556288 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
ATXN3-238ENST00000556288 RSF1Q96T23 1441 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-238ENST00000556288 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-238ENST00000556288 ZNF454Q8N9F8 522 aa8.3□□□□□ -1.08
ATXN3-238ENST00000556288 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-238ENST00000556288 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-238ENST00000556288 PHF14O94880 888 aa8.29□□□□□ -1.08
ATXN3-238ENST00000556288 FOSBP53539 338 aa8.29□□□□□ -1.08
ATXN3-238ENST00000556288 JPH4Q96JJ6 628 aa8.29□□□□□ -1.08
ATXN3-238ENST00000556288 EPAS1Q99814 870 aa8.29□□□□□ -1.08
ATXN3-238ENST00000556288 PCDHGA10Q9Y5H3 936 aa8.29□□□□□ -1.08
ATXN3-238ENST00000556288 NESP48681 1621 aa8.28□□□□□ -1.08
ATXN3-238ENST00000556288 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
ATXN3-238ENST00000556288 HRO43593 1189 aa8.27□□□□□ -1.09
ATXN3-238ENST00000556288 RGS20O76081 388 aa8.27□□□□□ -1.09
ATXN3-238ENST00000556288 OSBPP22059 807 aa8.27□□□□□ -1.09
ATXN3-238ENST00000556288 PPP4R3BQ5MIZ7 849 aa8.27□□□□□ -1.09
ATXN3-238ENST00000556288 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
ATXN3-238ENST00000556288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
ATXN3-238ENST00000556288 ZDHHC16Q969W1 377 aa8.26□□□□□ -1.09
ATXN3-238ENST00000556288 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
ATXN3-238ENST00000556288 FBXW7Q969H0 707 aa8.25□□□□□ -1.09
ATXN3-238ENST00000556288 ARHGAP33O14559 1287 aa8.24□□□□□ -1.09
ATXN3-238ENST00000556288 MAP3K7O43318 606 aa8.24□□□□□ -1.09
ATXN3-238ENST00000556288 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
ATXN3-238ENST00000556288 KCTD12Q96CX2 325 aaKnown RBP8.24□□□□□ -1.09
ATXN3-238ENST00000556288 KIF21AQ7Z4S6 1674 aa8.24□□□□□ -1.09
ATXN3-238ENST00000556288 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
ATXN3-238ENST00000556288 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
ATXN3-238ENST00000556288 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
ATXN3-238ENST00000556288 ADAM33Q9BZ11 813 aa8.23□□□□□ -1.09
ATXN3-238ENST00000556288 NUTM2FA1L443 756 aa8.22□□□□□ -1.09
ATXN3-238ENST00000556288 TK2O00142 265 aa8.22□□□□□ -1.09
ATXN3-238ENST00000556288 EN1Q05925 392 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-238ENST00000556288 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
ATXN3-238ENST00000556288 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.1
ATXN3-238ENST00000556288 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
ATXN3-238ENST00000556288 IFFO2Q5TF58 517 aa8.2□□□□□ -1.1
ATXN3-238ENST00000556288 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
ATXN3-238ENST00000556288 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
ATXN3-238ENST00000556288 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 PTPREP23469 700 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 PSEN2P49810 448 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 GPIHBP1Q8IV16 184 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 KCNH8Q96L42 1107 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
ATXN3-238ENST00000556288 A0A0G2JS52 829 aa8.17□□□□□ -1.1
ATXN3-238ENST00000556288 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
ATXN3-238ENST00000556288 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
ATXN3-238ENST00000556288 PDS5BQ9NTI5 1447 aa8.16□□□□□ -1.1
ATXN3-238ENST00000556288 FCHSD2O94868 740 aa8.15□□□□□ -1.1
ATXN3-238ENST00000556288 COL9A1P20849 921 aa8.14□□□□□ -1.11
ATXN3-238ENST00000556288 PTPN5P54829 565 aa8.14□□□□□ -1.11
ATXN3-238ENST00000556288 PTGDRQ13258 359 aa8.13□□□□□ -1.11
ATXN3-238ENST00000556288 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
ATXN3-238ENST00000556288 NPDC1Q9NQX5 325 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-238ENST00000556288 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
ATXN3-238ENST00000556288 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
ATXN3-238ENST00000556288 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
ATXN3-238ENST00000556288 Q6ZNB5 142 aa8.1□□□□□ -1.11
ATXN3-238ENST00000556288 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
ATXN3-238ENST00000556288 CEP164Q9UPV0 1460 aa8.1□□□□□ -1.11
ATXN3-238ENST00000556288 CFTRP13569 1480 aa8.09□□□□□ -1.11
ATXN3-238ENST00000556288 GPR37O15354 613 aa8.09□□□□□ -1.11
ATXN3-238ENST00000556288 PRSS12P56730 875 aa8.09□□□□□ -1.11
ATXN3-238ENST00000556288 HIC1Q14526 733 aa8.09□□□□□ -1.11
ATXN3-238ENST00000556288 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
ATXN3-238ENST00000556288 GNPATO15228 680 aa8.08□□□□□ -1.12
ATXN3-238ENST00000556288 CDCA7LQ96GN5 454 aa8.08□□□□□ -1.12
ATXN3-238ENST00000556288 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
ATXN3-238ENST00000556288 ZMYND10O75800 440 aa8.07□□□□□ -1.12
ATXN3-238ENST00000556288 PROX2Q3B8N5 592 aa8.07□□□□□ -1.12
ATXN3-238ENST00000556288 KRI1Q8N9T8 703 aaKnown RBP8.07□□□□□ -1.12
ATXN3-238ENST00000556288 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
ATXN3-238ENST00000556288 CUX2O14529 1486 aa8.06□□□□□ -1.12
ATXN3-238ENST00000556288 MRC2Q9UBG0 1479 aa8.06□□□□□ -1.12
ATXN3-238ENST00000556288 FECHP22830 423 aa8.06□□□□□ -1.12
ATXN3-238ENST00000556288 PADI6Q6TGC4 694 aa8.06□□□□□ -1.12
ATXN3-238ENST00000556288 TRIM6-TRIM34B2RNG4 842 aa8.05□□□□□ -1.12
ATXN3-238ENST00000556288 PRKCSHP14314 528 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms