RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
TGFB3-204ENST00000556285 FBXO31Q5XUX0 539 aaPredicted RBP21.18■□□□□ 0.98
TGFB3-204ENST00000556285 DISP3Q9P2K9 1392 aa21.18■□□□□ 0.98
TGFB3-204ENST00000556285 ARHGEF5Q12774 1597 aa21.18■□□□□ 0.98
TGFB3-204ENST00000556285 KDM5DQ9BY66 1539 aa21.17■□□□□ 0.98
TGFB3-204ENST00000556285 LRRC9Q6ZRR7 1453 aa21.16■□□□□ 0.98
TGFB3-204ENST00000556285 KIF3BO15066 747 aa21.15■□□□□ 0.98
TGFB3-204ENST00000556285 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
TGFB3-204ENST00000556285 PZPP20742 1482 aa21.14■□□□□ 0.98
TGFB3-204ENST00000556285 CFAP65Q6ZU64 1925 aaKnown RBP21.12■□□□□ 0.97
TGFB3-204ENST00000556285 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
TGFB3-204ENST00000556285 PKD2Q13563 968 aa21.12■□□□□ 0.97
TGFB3-204ENST00000556285 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
TGFB3-204ENST00000556285 CEP152O94986 1710 aa21.12■□□□□ 0.97
TGFB3-204ENST00000556285 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
TGFB3-204ENST00000556285 TNRQ92752 1358 aa21.1■□□□□ 0.97
TGFB3-204ENST00000556285 MAST1Q9Y2H9 1570 aa21.1■□□□□ 0.97
TGFB3-204ENST00000556285 RSPH4AQ5TD94 716 aa21.09■□□□□ 0.97
TGFB3-204ENST00000556285 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
TGFB3-204ENST00000556285 STRCP1A6NGW2 1772 aa21.08■□□□□ 0.97
TGFB3-204ENST00000556285 ABCC3O15438 1527 aa21.06■□□□□ 0.96
TGFB3-204ENST00000556285 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
TGFB3-204ENST00000556285 MAP3K1Q13233 1512 aa21.05■□□□□ 0.96
TGFB3-204ENST00000556285 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
TGFB3-204ENST00000556285 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
TGFB3-204ENST00000556285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.96
TGFB3-204ENST00000556285 ZC3H13Q5T200 1668 aaKnown RBP21.05■□□□□ 0.96
TGFB3-204ENST00000556285 EIF2AK4Q9P2K8 1649 aaKnown RBP21.04■□□□□ 0.96
TGFB3-204ENST00000556285 UBAP1LF5GYI3 381 aa21.04■□□□□ 0.96
TGFB3-204ENST00000556285 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
TGFB3-204ENST00000556285 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
TGFB3-204ENST00000556285 UGGT1Q9NYU2 1555 aa21.03■□□□□ 0.96
TGFB3-204ENST00000556285 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
TGFB3-204ENST00000556285 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
TGFB3-204ENST00000556285 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
TGFB3-204ENST00000556285 DEPDC5O75140 1603 aa21.01■□□□□ 0.95
TGFB3-204ENST00000556285 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
TGFB3-204ENST00000556285 SHANK2Q9UPX8 1470 aa21■□□□□ 0.95
TGFB3-204ENST00000556285 UBR1Q8IWV7 1749 aa20.99■□□□□ 0.95
TGFB3-204ENST00000556285 NLRP1Q9C000 1473 aa20.99■□□□□ 0.95
TGFB3-204ENST00000556285 ERVK-7P63135 1459 aa20.98■□□□□ 0.95
TGFB3-204ENST00000556285 CPS1P31327 1500 aa20.97■□□□□ 0.95
TGFB3-204ENST00000556285 MED14O60244 1454 aa20.96■□□□□ 0.95
TGFB3-204ENST00000556285 SOCS7O14512 581 aa20.96■□□□□ 0.95
TGFB3-204ENST00000556285 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.94
TGFB3-204ENST00000556285 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
TGFB3-204ENST00000556285 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
TGFB3-204ENST00000556285 PRDM15P57071 1507 aaPredicted RBP20.91■□□□□ 0.94
TGFB3-204ENST00000556285 DUOX2Q9NRD8 1548 aa20.91■□□□□ 0.94
TGFB3-204ENST00000556285 ABCC5O15440 1437 aa20.9■□□□□ 0.94
TGFB3-204ENST00000556285 HSPA1LP34931 641 aa20.9■□□□□ 0.94
TGFB3-204ENST00000556285 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
TGFB3-204ENST00000556285 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.94
TGFB3-204ENST00000556285 PIP4K2BP78356 416 aa20.89■□□□□ 0.93
TGFB3-204ENST00000556285 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
TGFB3-204ENST00000556285 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
TGFB3-204ENST00000556285 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
TGFB3-204ENST00000556285 APLP2Q06481 763 aa20.87■□□□□ 0.93
TGFB3-204ENST00000556285 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
TGFB3-204ENST00000556285 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
TGFB3-204ENST00000556285 LRRC7Q96NW7 1537 aa20.86■□□□□ 0.93
TGFB3-204ENST00000556285 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
TGFB3-204ENST00000556285 DAPK1P53355 1430 aa20.84■□□□□ 0.93
TGFB3-204ENST00000556285 FGD6Q6ZV73 1430 aa20.84■□□□□ 0.93
TGFB3-204ENST00000556285 SYNMO15061 1565 aa20.84■□□□□ 0.93
TGFB3-204ENST00000556285 ARHGAP23Q9P227 1491 aa20.83■□□□□ 0.93
TGFB3-204ENST00000556285 SLIT1O75093 1534 aa20.82■□□□□ 0.92
TGFB3-204ENST00000556285 LTKP29376 864 aa20.81■□□□□ 0.92
TGFB3-204ENST00000556285 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
TGFB3-204ENST00000556285 ERBINQ96RT1 1412 aa20.8■□□□□ 0.92
TGFB3-204ENST00000556285 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
TGFB3-204ENST00000556285 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
TGFB3-204ENST00000556285 TOM1O60784 492 aa20.79■□□□□ 0.92
TGFB3-204ENST00000556285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.92
TGFB3-204ENST00000556285 MYO5BQ9ULV0 1848 aa20.77■□□□□ 0.92
TGFB3-204ENST00000556285 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
TGFB3-204ENST00000556285 KDM5AP29375 1690 aaKnown RBP20.73■□□□□ 0.91
TGFB3-204ENST00000556285 LMTK2Q8IWU2 1503 aa20.73■□□□□ 0.91
TGFB3-204ENST00000556285 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
TGFB3-204ENST00000556285 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
TGFB3-204ENST00000556285 EFCAB6Q5THR3 1501 aa20.71■□□□□ 0.91
TGFB3-204ENST00000556285 TET3O43151 1660 aa20.69■□□□□ 0.9
TGFB3-204ENST00000556285 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
TGFB3-204ENST00000556285 KANK1Q14678 1352 aa20.68■□□□□ 0.9
TGFB3-204ENST00000556285 TMEM2Q9UHN6 1383 aa20.68■□□□□ 0.9
TGFB3-204ENST00000556285 NOS1P29475 1434 aa20.67■□□□□ 0.9
TGFB3-204ENST00000556285 ADGRL2O95490 1459 aa20.67■□□□□ 0.9
TGFB3-204ENST00000556285 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
TGFB3-204ENST00000556285 IDI1Q13907 227 aa20.66■□□□□ 0.9
TGFB3-204ENST00000556285 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
TGFB3-204ENST00000556285 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
TGFB3-204ENST00000556285 NWD1Q149M9 1564 aa20.61■□□□□ 0.89
TGFB3-204ENST00000556285 ROBO1Q9Y6N7 1651 aa20.61■□□□□ 0.89
TGFB3-204ENST00000556285 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
TGFB3-204ENST00000556285 STAG3Q9UJ98 1225 aa20.59■□□□□ 0.89
TGFB3-204ENST00000556285 CHD2O14647 1828 aaKnown RBP20.59■□□□□ 0.89
TGFB3-204ENST00000556285 ANKRD50Q9ULJ7 1429 aa20.59■□□□□ 0.89
TGFB3-204ENST00000556285 E9PCH4 1651 aa20.58■□□□□ 0.89
TGFB3-204ENST00000556285 TMEM131LA2VDJ0 1609 aa20.58■□□□□ 0.89
TGFB3-204ENST00000556285 EID1Q9Y6B2 187 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms