RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
PRKCH-221ENST00000556245 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
PRKCH-221ENST00000556245 ZBED9Q6R2W3 1325 aa15.96■□□□□ 0.15
PRKCH-221ENST00000556245 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
PRKCH-221ENST00000556245 DUOX2Q9NRD8 1548 aa15.95■□□□□ 0.14
PRKCH-221ENST00000556245 PLCH2O75038 1416 aa15.95■□□□□ 0.14
PRKCH-221ENST00000556245 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
PRKCH-221ENST00000556245 IQGAP3Q86VI3 1631 aa15.94■□□□□ 0.14
PRKCH-221ENST00000556245 EFCAB2Q5VUJ9 269 aa15.93■□□□□ 0.14
PRKCH-221ENST00000556245 ERBINQ96RT1 1412 aa15.93■□□□□ 0.14
PRKCH-221ENST00000556245 MYT1Q01538 1121 aa15.92■□□□□ 0.14
PRKCH-221ENST00000556245 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
PRKCH-221ENST00000556245 ST20-MTHFSA0A0A6YYL1 179 aa15.91■□□□□ 0.14
PRKCH-221ENST00000556245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRKCH-221ENST00000556245 PRAG1Q86YV5 1406 aa15.91■□□□□ 0.14
PRKCH-221ENST00000556245 TRPM1Q7Z4N2 1603 aa15.9■□□□□ 0.14
PRKCH-221ENST00000556245 MAGI2Q86UL8 1455 aa15.9■□□□□ 0.14
PRKCH-221ENST00000556245 PLA2R1Q13018 1463 aa15.89■□□□□ 0.13
PRKCH-221ENST00000556245 ABCC1P33527 1531 aa15.89■□□□□ 0.13
PRKCH-221ENST00000556245 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
PRKCH-221ENST00000556245 ATP10AO60312 1499 aa15.88■□□□□ 0.13
PRKCH-221ENST00000556245 A2MP01023 1474 aa15.86■□□□□ 0.13
PRKCH-221ENST00000556245 ARAP3Q8WWN8 1544 aa15.86■□□□□ 0.13
PRKCH-221ENST00000556245 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
PRKCH-221ENST00000556245 LAMC1P11047 1609 aa15.86■□□□□ 0.13
PRKCH-221ENST00000556245 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
PRKCH-221ENST00000556245 GPRASP1Q5JY77 1395 aa15.85■□□□□ 0.13
PRKCH-221ENST00000556245 CNGB1Q14028 1251 aaPredicted RBP15.84■□□□□ 0.13
PRKCH-221ENST00000556245 E9PCH4 1651 aa15.84■□□□□ 0.13
PRKCH-221ENST00000556245 RALBP1Q15311 655 aa15.83■□□□□ 0.13
PRKCH-221ENST00000556245 TMC1Q8TDI8 760 aa15.83■□□□□ 0.13
PRKCH-221ENST00000556245 TRAPPC8Q9Y2L5 1435 aa15.83■□□□□ 0.13
PRKCH-221ENST00000556245 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.12
PRKCH-221ENST00000556245 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.12
PRKCH-221ENST00000556245 SPAG9O60271 1321 aaKnown RBP15.82■□□□□ 0.12
PRKCH-221ENST00000556245 PPP4R2Q9NY27 417 aa15.81■□□□□ 0.12
PRKCH-221ENST00000556245 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
PRKCH-221ENST00000556245 MYBBP1AQ9BQG0 1328 aaKnown RBP15.81■□□□□ 0.12
PRKCH-221ENST00000556245 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
PRKCH-221ENST00000556245 SMG6Q86US8 1419 aaKnown RBP15.8■□□□□ 0.12
PRKCH-221ENST00000556245 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
PRKCH-221ENST00000556245 NBPF1Q3BBV0 1214 aa15.8■□□□□ 0.12
PRKCH-221ENST00000556245 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
PRKCH-221ENST00000556245 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
PRKCH-221ENST00000556245 COL17A1Q9UMD9 1497 aaPredicted RBP15.77■□□□□ 0.12
PRKCH-221ENST00000556245 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
PRKCH-221ENST00000556245 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
PRKCH-221ENST00000556245 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
PRKCH-221ENST00000556245 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
PRKCH-221ENST00000556245 TRPM2O94759 1503 aa15.74■□□□□ 0.11
PRKCH-221ENST00000556245 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
PRKCH-221ENST00000556245 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
PRKCH-221ENST00000556245 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
PRKCH-221ENST00000556245 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
PRKCH-221ENST00000556245 TESK2Q96S53 571 aa15.74■□□□□ 0.11
PRKCH-221ENST00000556245 DEPDC5O75140 1603 aa15.73■□□□□ 0.11
PRKCH-221ENST00000556245 FANCAO15360 1455 aa15.73■□□□□ 0.11
PRKCH-221ENST00000556245 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
PRKCH-221ENST00000556245 TMF1P82094 1093 aa15.73■□□□□ 0.11
PRKCH-221ENST00000556245 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
PRKCH-221ENST00000556245 KANK1Q14678 1352 aa15.72■□□□□ 0.11
PRKCH-221ENST00000556245 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
PRKCH-221ENST00000556245 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
PRKCH-221ENST00000556245 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.11
PRKCH-221ENST00000556245 TET3O43151 1660 aa15.71■□□□□ 0.11
PRKCH-221ENST00000556245 DISP3Q9P2K9 1392 aa15.71■□□□□ 0.11
PRKCH-221ENST00000556245 CEP152O94986 1710 aa15.71■□□□□ 0.11
PRKCH-221ENST00000556245 PTPRTO14522 1441 aa15.71■□□□□ 0.11
PRKCH-221ENST00000556245 PER1O15534 1290 aaPredicted RBP15.7■□□□□ 0.1
PRKCH-221ENST00000556245 MADDQ8WXG6 1647 aa15.7■□□□□ 0.1
PRKCH-221ENST00000556245 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
PRKCH-221ENST00000556245 RNF123Q5XPI4 1314 aa15.68■□□□□ 0.1
PRKCH-221ENST00000556245 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
PRKCH-221ENST00000556245 SCAPERQ9BY12 1400 aa15.67■□□□□ 0.1
PRKCH-221ENST00000556245 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
PRKCH-221ENST00000556245 CLTCL1P53675 1640 aa15.66■□□□□ 0.1
PRKCH-221ENST00000556245 PANK3Q9H999 370 aa15.66■□□□□ 0.1
PRKCH-221ENST00000556245 IQGAP1P46940 1657 aa15.66■□□□□ 0.1
PRKCH-221ENST00000556245 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
PRKCH-221ENST00000556245 KIF3BO15066 747 aa15.65■□□□□ 0.1
PRKCH-221ENST00000556245 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
PRKCH-221ENST00000556245 NEURL4Q96JN8 1562 aa15.64■□□□□ 0.09
PRKCH-221ENST00000556245 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
PRKCH-221ENST00000556245 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
PRKCH-221ENST00000556245 INSRP06213 1382 aa15.63■□□□□ 0.09
PRKCH-221ENST00000556245 ZMYM4Q5VZL5 1548 aa15.62■□□□□ 0.09
PRKCH-221ENST00000556245 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
PRKCH-221ENST00000556245 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
PRKCH-221ENST00000556245 KIAA1210Q9ULL0 1709 aa15.61■□□□□ 0.09
PRKCH-221ENST00000556245 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
PRKCH-221ENST00000556245 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
PRKCH-221ENST00000556245 MROH1Q8NDA8 1641 aa15.6■□□□□ 0.09
PRKCH-221ENST00000556245 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
PRKCH-221ENST00000556245 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
PRKCH-221ENST00000556245 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
PRKCH-221ENST00000556245 SYNMO15061 1565 aa15.58■□□□□ 0.08
PRKCH-221ENST00000556245 KIDINS220Q9ULH0 1771 aa15.58■□□□□ 0.08
PRKCH-221ENST00000556245 EFCAB6Q5THR3 1501 aa15.58■□□□□ 0.08
PRKCH-221ENST00000556245 SLC24A1O60721 1099 aa15.58■□□□□ 0.08
PRKCH-221ENST00000556245 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms