RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SOCS7O14512 581 aa10.72□□□□□ -0.69
PSEN1-216ENST00000556066 MLH3Q9UHC1 1453 aa10.72□□□□□ -0.69
PSEN1-216ENST00000556066 GPATCH8Q9UKJ3 1502 aaKnown RBP10.72□□□□□ -0.69
PSEN1-216ENST00000556066 CEBPAP49715 358 aaPredicted RBP10.71□□□□□ -0.69
PSEN1-216ENST00000556066 HNRNPMP52272 730 aaKnown RBP eCLIP10.71□□□□□ -0.69
PSEN1-216ENST00000556066 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.69
PSEN1-216ENST00000556066 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.69
PSEN1-216ENST00000556066 CFDP1Q9UEE9 299 aaPredicted RBP10.71□□□□□ -0.69
PSEN1-216ENST00000556066 DISP3Q9P2K9 1392 aa10.7□□□□□ -0.7
PSEN1-216ENST00000556066 PREX1Q8TCU6 1659 aa10.69□□□□□ -0.7
PSEN1-216ENST00000556066 REREQ9P2R6 1566 aa10.69□□□□□ -0.7
PSEN1-216ENST00000556066 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
PSEN1-216ENST00000556066 ESF1Q9H501 851 aaKnown RBP10.69□□□□□ -0.7
PSEN1-216ENST00000556066 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
PSEN1-216ENST00000556066 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
PSEN1-216ENST00000556066 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
PSEN1-216ENST00000556066 SETD1BQ9UPS6 1966 aaKnown RBP10.68□□□□□ -0.7
PSEN1-216ENST00000556066 EHBP1L1Q8N3D4 1523 aa10.68□□□□□ -0.7
PSEN1-216ENST00000556066 C3P01024 1663 aa10.67□□□□□ -0.7
PSEN1-216ENST00000556066 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
PSEN1-216ENST00000556066 PLEKHH2Q8IVE3 1493 aa10.67□□□□□ -0.7
PSEN1-216ENST00000556066 AGLP35573 1532 aa10.66□□□□□ -0.7
PSEN1-216ENST00000556066 ATP7AQ04656 1500 aa10.66□□□□□ -0.7
PSEN1-216ENST00000556066 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-216ENST00000556066 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.7
PSEN1-216ENST00000556066 INO80Q9ULG1 1556 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-216ENST00000556066 GABBR2O75899 941 aa10.63□□□□□ -0.71
PSEN1-216ENST00000556066 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
PSEN1-216ENST00000556066 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
PSEN1-216ENST00000556066 UHRF1BP1Q6BDS2 1440 aa10.63□□□□□ -0.71
PSEN1-216ENST00000556066 STRCQ7RTU9 1775 aa10.62□□□□□ -0.71
PSEN1-216ENST00000556066 LHX8Q68G74 356 aa10.62□□□□□ -0.71
PSEN1-216ENST00000556066 ADGBQ8N7X0 1667 aa10.62□□□□□ -0.71
PSEN1-216ENST00000556066 A2MP01023 1474 aa10.61□□□□□ -0.71
PSEN1-216ENST00000556066 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
PSEN1-216ENST00000556066 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
PSEN1-216ENST00000556066 CLTCQ00610 1675 aaKnown RBP10.61□□□□□ -0.71
PSEN1-216ENST00000556066 MROH2AA6NES4 1674 aa10.6□□□□□ -0.71
PSEN1-216ENST00000556066 PTPRTO14522 1441 aa10.6□□□□□ -0.71
PSEN1-216ENST00000556066 VPS8Q8N3P4 1428 aa10.6□□□□□ -0.71
PSEN1-216ENST00000556066 GGT6Q6P531 493 aa10.6□□□□□ -0.71
PSEN1-216ENST00000556066 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
PSEN1-216ENST00000556066 CAMSAP2Q08AD1 1489 aa10.59□□□□□ -0.71
PSEN1-216ENST00000556066 MBD5Q9P267 1494 aa10.59□□□□□ -0.71
PSEN1-216ENST00000556066 ZMYM3Q14202 1370 aa10.58□□□□□ -0.72
PSEN1-216ENST00000556066 FKBP8Q14318 412 aa10.58□□□□□ -0.72
PSEN1-216ENST00000556066 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
PSEN1-216ENST00000556066 CCDC141Q6ZP82 1450 aa10.56□□□□□ -0.72
PSEN1-216ENST00000556066 LRRC9Q6ZRR7 1453 aa10.56□□□□□ -0.72
PSEN1-216ENST00000556066 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
PSEN1-216ENST00000556066 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
PSEN1-216ENST00000556066 SPATA31D1Q6ZQQ2 1576 aa10.56□□□□□ -0.72
PSEN1-216ENST00000556066 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-216ENST00000556066 NPATQ14207 1427 aa10.55□□□□□ -0.72
PSEN1-216ENST00000556066 KIF3BO15066 747 aa10.54□□□□□ -0.72
PSEN1-216ENST00000556066 NCOA1Q15788 1441 aa10.54□□□□□ -0.72
PSEN1-216ENST00000556066 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-216ENST00000556066 RSPH4AQ5TD94 716 aa10.54□□□□□ -0.72
PSEN1-216ENST00000556066 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
PSEN1-216ENST00000556066 ARHGEF5Q12774 1597 aa10.53□□□□□ -0.72
PSEN1-216ENST00000556066 TSPY4P0CV99 314 aa10.53□□□□□ -0.72
PSEN1-216ENST00000556066 TSPY10P0CW01 314 aa10.53□□□□□ -0.72
PSEN1-216ENST00000556066 CLCN6P51797 869 aa10.53□□□□□ -0.72
PSEN1-216ENST00000556066 CAMSAP1Q5T5Y3 1602 aa10.53□□□□□ -0.72
PSEN1-216ENST00000556066 MYO3AQ8NEV4 1616 aa10.53□□□□□ -0.72
PSEN1-216ENST00000556066 IQSEC2Q5JU85 1478 aa10.52□□□□□ -0.73
PSEN1-216ENST00000556066 MAP3K1Q13233 1512 aa10.52□□□□□ -0.73
PSEN1-216ENST00000556066 PTPRKQ15262 1439 aa10.51□□□□□ -0.73
PSEN1-216ENST00000556066 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
PSEN1-216ENST00000556066 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-216ENST00000556066 CEP170BQ9Y4F5 1589 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-216ENST00000556066 ZNF335Q9H4Z2 1342 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-216ENST00000556066 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
PSEN1-216ENST00000556066 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
PSEN1-216ENST00000556066 CFAP65Q6ZU64 1925 aaKnown RBP10.48□□□□□ -0.73
PSEN1-216ENST00000556066 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
PSEN1-216ENST00000556066 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
PSEN1-216ENST00000556066 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-216ENST00000556066 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
PSEN1-216ENST00000556066 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
PSEN1-216ENST00000556066 MAST1Q9Y2H9 1570 aa10.47□□□□□ -0.73
PSEN1-216ENST00000556066 TNRQ92752 1358 aa10.46□□□□□ -0.74
PSEN1-216ENST00000556066 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
PSEN1-216ENST00000556066 PTPN23Q9H3S7 1636 aa10.45□□□□□ -0.74
PSEN1-216ENST00000556066 FAM135AQ9P2D6 1515 aa10.45□□□□□ -0.74
PSEN1-216ENST00000556066 A2ML1A8K2U0 1454 aa10.45□□□□□ -0.74
PSEN1-216ENST00000556066 PZPP20742 1482 aa10.45□□□□□ -0.74
PSEN1-216ENST00000556066 CEP152O94986 1710 aa10.44□□□□□ -0.74
PSEN1-216ENST00000556066 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-216ENST00000556066 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
PSEN1-216ENST00000556066 RNF17Q9BXT8 1623 aaKnown RBP10.44□□□□□ -0.74
PSEN1-216ENST00000556066 EIF2AK4Q9P2K8 1649 aaKnown RBP10.44□□□□□ -0.74
PSEN1-216ENST00000556066 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
PSEN1-216ENST00000556066 PKD2Q13563 968 aa10.44□□□□□ -0.74
PSEN1-216ENST00000556066 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
PSEN1-216ENST00000556066 DUOX2Q9NRD8 1548 aa10.43□□□□□ -0.74
PSEN1-216ENST00000556066 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
PSEN1-216ENST00000556066 HSPA1LP34931 641 aa10.42□□□□□ -0.74
PSEN1-216ENST00000556066 DCBLD2Q96PD2 775 aa10.42□□□□□ -0.74
PSEN1-216ENST00000556066 RRP7BPQ9NSQ0 103 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms