RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 CCDC18Q5T9S5 1454 aa11.65□□□□□ -0.54
LINC00641-202ENST00000555688 EPRSP07814 1512 aaKnown RBP11.64□□□□□ -0.55
LINC00641-202ENST00000555688 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
LINC00641-202ENST00000555688 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
LINC00641-202ENST00000555688 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
LINC00641-202ENST00000555688 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
LINC00641-202ENST00000555688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00641-202ENST00000555688 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
LINC00641-202ENST00000555688 EHBP1L1Q8N3D4 1523 aa11.61□□□□□ -0.55
LINC00641-202ENST00000555688 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
LINC00641-202ENST00000555688 CDK13Q14004 1512 aaKnown RBP11.61□□□□□ -0.55
LINC00641-202ENST00000555688 NBR1Q14596 966 aa11.61□□□□□ -0.55
LINC00641-202ENST00000555688 NUP153P49790 1475 aaKnown RBP11.6□□□□□ -0.55
LINC00641-202ENST00000555688 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
LINC00641-202ENST00000555688 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
LINC00641-202ENST00000555688 CHD1O14646 1710 aa11.6□□□□□ -0.55
LINC00641-202ENST00000555688 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
LINC00641-202ENST00000555688 CARMIL2Q6F5E8 1435 aa11.59□□□□□ -0.55
LINC00641-202ENST00000555688 ITGAEP38570 1179 aa11.59□□□□□ -0.55
LINC00641-202ENST00000555688 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
LINC00641-202ENST00000555688 FAM50AQ14320 339 aaKnown RBP11.59□□□□□ -0.55
LINC00641-202ENST00000555688 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
LINC00641-202ENST00000555688 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
LINC00641-202ENST00000555688 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
LINC00641-202ENST00000555688 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
LINC00641-202ENST00000555688 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
LINC00641-202ENST00000555688 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
LINC00641-202ENST00000555688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00641-202ENST00000555688 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
LINC00641-202ENST00000555688 PRG4Q92954 1404 aaPredicted RBP11.54□□□□□ -0.56
LINC00641-202ENST00000555688 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
LINC00641-202ENST00000555688 ABCA8O94911 1581 aa11.54□□□□□ -0.56
LINC00641-202ENST00000555688 CLSPNQ9HAW4 1339 aa11.54□□□□□ -0.56
LINC00641-202ENST00000555688 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
LINC00641-202ENST00000555688 PTPRKQ15262 1439 aa11.53□□□□□ -0.56
LINC00641-202ENST00000555688 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.57
LINC00641-202ENST00000555688 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
LINC00641-202ENST00000555688 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
LINC00641-202ENST00000555688 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
LINC00641-202ENST00000555688 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
LINC00641-202ENST00000555688 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
LINC00641-202ENST00000555688 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
LINC00641-202ENST00000555688 PDE4AP27815 886 aa11.49□□□□□ -0.57
LINC00641-202ENST00000555688 PTPRGP23470 1445 aa11.49□□□□□ -0.57
LINC00641-202ENST00000555688 ATP10BO94823 1461 aa11.49□□□□□ -0.57
LINC00641-202ENST00000555688 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
LINC00641-202ENST00000555688 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
LINC00641-202ENST00000555688 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
LINC00641-202ENST00000555688 GABBR2O75899 941 aa11.48□□□□□ -0.57
LINC00641-202ENST00000555688 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
LINC00641-202ENST00000555688 ERCC6L2Q5T890 1561 aa11.47□□□□□ -0.57
LINC00641-202ENST00000555688 IER5LQ5T953 404 aa11.46□□□□□ -0.57
LINC00641-202ENST00000555688 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
LINC00641-202ENST00000555688 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
LINC00641-202ENST00000555688 ADCY10Q96PN6 1610 aa11.45□□□□□ -0.58
LINC00641-202ENST00000555688 E2F4Q16254 413 aa11.45□□□□□ -0.58
LINC00641-202ENST00000555688 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
LINC00641-202ENST00000555688 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
LINC00641-202ENST00000555688 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
LINC00641-202ENST00000555688 MFSD10Q14728 455 aa11.44□□□□□ -0.58
LINC00641-202ENST00000555688 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
LINC00641-202ENST00000555688 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
LINC00641-202ENST00000555688 NAIPQ13075 1403 aa11.44□□□□□ -0.58
LINC00641-202ENST00000555688 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
LINC00641-202ENST00000555688 KIF14Q15058 1648 aa11.44□□□□□ -0.58
LINC00641-202ENST00000555688 GPATCH8Q9UKJ3 1502 aaKnown RBP11.43□□□□□ -0.58
LINC00641-202ENST00000555688 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
LINC00641-202ENST00000555688 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
LINC00641-202ENST00000555688 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
LINC00641-202ENST00000555688 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
LINC00641-202ENST00000555688 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
LINC00641-202ENST00000555688 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
LINC00641-202ENST00000555688 ABCC10Q5T3U5 1492 aa11.41□□□□□ -0.58
LINC00641-202ENST00000555688 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
LINC00641-202ENST00000555688 ABCC5O15440 1437 aa11.4□□□□□ -0.59
LINC00641-202ENST00000555688 AKNAQ7Z591 1439 aa11.4□□□□□ -0.59
LINC00641-202ENST00000555688 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
LINC00641-202ENST00000555688 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
LINC00641-202ENST00000555688 DAPK1P53355 1430 aa11.38□□□□□ -0.59
LINC00641-202ENST00000555688 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
LINC00641-202ENST00000555688 ITSN2Q9NZM3 1697 aa11.38□□□□□ -0.59
LINC00641-202ENST00000555688 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
LINC00641-202ENST00000555688 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
LINC00641-202ENST00000555688 CFDP1Q9UEE9 299 aaPredicted RBP11.38□□□□□ -0.59
LINC00641-202ENST00000555688 ABCC2Q92887 1545 aa11.37□□□□□ -0.59
LINC00641-202ENST00000555688 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
LINC00641-202ENST00000555688 GCC2Q8IWJ2 1684 aa11.37□□□□□ -0.59
LINC00641-202ENST00000555688 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
LINC00641-202ENST00000555688 ROCK1Q13464 1354 aa11.36□□□□□ -0.59
LINC00641-202ENST00000555688 CAMSAP2Q08AD1 1489 aa11.36□□□□□ -0.59
LINC00641-202ENST00000555688 CDC42BPAQ5VT25 1732 aa11.36□□□□□ -0.59
LINC00641-202ENST00000555688 TMEM121BQ9BXQ6 578 aaPredicted RBP11.36□□□□□ -0.59
LINC00641-202ENST00000555688 UHRF1BP1LA0JNW5 1464 aa11.35□□□□□ -0.59
LINC00641-202ENST00000555688 PLCG2P16885 1265 aa11.35□□□□□ -0.59
LINC00641-202ENST00000555688 KDM6BO15054 1643 aa11.35□□□□□ -0.59
LINC00641-202ENST00000555688 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
LINC00641-202ENST00000555688 SIN3AQ96ST3 1273 aa11.34□□□□□ -0.59
LINC00641-202ENST00000555688 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
LINC00641-202ENST00000555688 ARIH1Q9Y4X5 557 aaPredicted RBP11.33□□□□□ -0.59
LINC00641-202ENST00000555688 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms