RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 BCAMP50895 628 aa12.34□□□□□ -0.43
SNX6-204ENST00000555541 ANKK1Q8NFD2 765 aa12.34□□□□□ -0.43
SNX6-204ENST00000555541 LAPTM4BQ86VI4 370 aa12.33□□□□□ -0.44
SNX6-204ENST00000555541 PHF14O94880 888 aa12.31□□□□□ -0.44
SNX6-204ENST00000555541 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
SNX6-204ENST00000555541 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
SNX6-204ENST00000555541 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
SNX6-204ENST00000555541 ZFRQ96KR1 1074 aaKnown RBP12.29□□□□□ -0.44
SNX6-204ENST00000555541 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
SNX6-204ENST00000555541 CADPS2Q86UW7 1296 aa12.28□□□□□ -0.44
SNX6-204ENST00000555541 NYAP1Q6ZVC0 841 aa12.27□□□□□ -0.45
SNX6-204ENST00000555541 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
SNX6-204ENST00000555541 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
SNX6-204ENST00000555541 C6orf132Q5T0Z8 1188 aa12.24□□□□□ -0.45
SNX6-204ENST00000555541 LCE2BO14633 110 aa12.23□□□□□ -0.45
SNX6-204ENST00000555541 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
SNX6-204ENST00000555541 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
SNX6-204ENST00000555541 KCNC4Q03721 635 aa12.2□□□□□ -0.46
SNX6-204ENST00000555541 EPAS1Q99814 870 aa12.19□□□□□ -0.46
SNX6-204ENST00000555541 FAM98CQ17RN3 349 aaKnown RBP12.18□□□□□ -0.46
SNX6-204ENST00000555541 Q6ZNB5 142 aa12.16□□□□□ -0.46
SNX6-204ENST00000555541 TSR3Q9UJK0 312 aaKnown RBP12.15□□□□□ -0.46
SNX6-204ENST00000555541 DPYSL4O14531 572 aa12.13□□□□□ -0.47
SNX6-204ENST00000555541 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
SNX6-204ENST00000555541 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
SNX6-204ENST00000555541 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
SNX6-204ENST00000555541 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
SNX6-204ENST00000555541 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
SNX6-204ENST00000555541 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
SNX6-204ENST00000555541 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
SNX6-204ENST00000555541 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
SNX6-204ENST00000555541 DDX12PQ92771 950 aa12.06□□□□□ -0.48
SNX6-204ENST00000555541 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
SNX6-204ENST00000555541 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
SNX6-204ENST00000555541 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
SNX6-204ENST00000555541 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
SNX6-204ENST00000555541 GFRA3O60609 400 aa12□□□□□ -0.49
SNX6-204ENST00000555541 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
SNX6-204ENST00000555541 PDIA6Q15084 440 aa12□□□□□ -0.49
SNX6-204ENST00000555541 PACS2Q86VP3 889 aa12□□□□□ -0.49
SNX6-204ENST00000555541 PPP4CP60510 307 aa11.97□□□□□ -0.49
SNX6-204ENST00000555541 NBR1Q14596 966 aa11.97□□□□□ -0.49
SNX6-204ENST00000555541 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
SNX6-204ENST00000555541 SMAPO00193 183 aa11.96□□□□□ -0.49
SNX6-204ENST00000555541 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
SNX6-204ENST00000555541 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
SNX6-204ENST00000555541 MAP3K7O43318 606 aa11.95□□□□□ -0.5
SNX6-204ENST00000555541 PRSS12P56730 875 aa11.95□□□□□ -0.5
SNX6-204ENST00000555541 MTRQ99707 1265 aa11.95□□□□□ -0.5
SNX6-204ENST00000555541 NRG2O14511 850 aaPredicted RBP11.94□□□□□ -0.5
SNX6-204ENST00000555541 PPP1R18Q6NYC8 613 aa11.94□□□□□ -0.5
SNX6-204ENST00000555541 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
SNX6-204ENST00000555541 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
SNX6-204ENST00000555541 ZNF516Q92618 1163 aa11.91□□□□□ -0.5
SNX6-204ENST00000555541 TATDN2Q93075 761 aa11.9□□□□□ -0.5
SNX6-204ENST00000555541 SPDYE16A6NNV3 312 aaPredicted RBP11.89□□□□□ -0.51
SNX6-204ENST00000555541 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
SNX6-204ENST00000555541 APLP1P51693 650 aa11.88□□□□□ -0.51
SNX6-204ENST00000555541 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
SNX6-204ENST00000555541 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
SNX6-204ENST00000555541 ARIH1Q9Y4X5 557 aaPredicted RBP11.87□□□□□ -0.51
SNX6-204ENST00000555541 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
SNX6-204ENST00000555541 PNMA3Q9UL41 463 aa11.84□□□□□ -0.51
SNX6-204ENST00000555541 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
SNX6-204ENST00000555541 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
SNX6-204ENST00000555541 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
SNX6-204ENST00000555541 OSBPP22059 807 aa11.82□□□□□ -0.52
SNX6-204ENST00000555541 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
SNX6-204ENST00000555541 NUDT18Q6ZVK8 323 aa11.8□□□□□ -0.52
SNX6-204ENST00000555541 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
SNX6-204ENST00000555541 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
SNX6-204ENST00000555541 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
SNX6-204ENST00000555541 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
SNX6-204ENST00000555541 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
SNX6-204ENST00000555541 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
SNX6-204ENST00000555541 E2F4Q16254 413 aa11.74□□□□□ -0.53
SNX6-204ENST00000555541 ZNF787Q6DD87 383 aa11.74□□□□□ -0.53
SNX6-204ENST00000555541 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
SNX6-204ENST00000555541 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
SNX6-204ENST00000555541 COPS2P61201 443 aa11.71□□□□□ -0.53
SNX6-204ENST00000555541 ZNF775Q96BV0 537 aaPredicted RBP11.71□□□□□ -0.53
SNX6-204ENST00000555541 RNF40O75150 1001 aa11.7□□□□□ -0.54
SNX6-204ENST00000555541 ZPR1O75312 459 aa11.7□□□□□ -0.54
SNX6-204ENST00000555541 EYA1Q99502 592 aa11.7□□□□□ -0.54
SNX6-204ENST00000555541 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
SNX6-204ENST00000555541 HDGFP51858 240 aaKnown RBP11.68□□□□□ -0.54
SNX6-204ENST00000555541 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
SNX6-204ENST00000555541 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
SNX6-204ENST00000555541 GGCXP38435 758 aa11.66□□□□□ -0.54
SNX6-204ENST00000555541 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
SNX6-204ENST00000555541 RNF223E7ERA6 249 aa11.65□□□□□ -0.54
SNX6-204ENST00000555541 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
SNX6-204ENST00000555541 MYT1Q01538 1121 aa11.61□□□□□ -0.55
SNX6-204ENST00000555541 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
SNX6-204ENST00000555541 SLC19A1P41440 591 aa11.6□□□□□ -0.55
SNX6-204ENST00000555541 BLOC1S3Q6QNY0 202 aa11.6□□□□□ -0.55
SNX6-204ENST00000555541 POTECB2RU33 542 aa11.59□□□□□ -0.55
SNX6-204ENST00000555541 PRR20EP86478 221 aa11.59□□□□□ -0.55
SNX6-204ENST00000555541 PRR20CP86479 221 aa11.59□□□□□ -0.55
SNX6-204ENST00000555541 PRR20DP86480 221 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms