RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 WDR62O43379 1518 aa22.52■■□□□ 1.2
PPP4R3A-208ENST00000555462 KTN1Q86UP2 1357 aaKnown RBP22.52■■□□□ 1.2
PPP4R3A-208ENST00000555462 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.19
PPP4R3A-208ENST00000555462 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
PPP4R3A-208ENST00000555462 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
PPP4R3A-208ENST00000555462 NEUROD2Q15784 382 aa22.47■■□□□ 1.19
PPP4R3A-208ENST00000555462 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
PPP4R3A-208ENST00000555462 GPATCH8Q9UKJ3 1502 aaKnown RBP22.45■■□□□ 1.18
PPP4R3A-208ENST00000555462 BRD4O60885 1362 aaPredicted RBP22.45■■□□□ 1.18
PPP4R3A-208ENST00000555462 DISP3Q9P2K9 1392 aa22.44■■□□□ 1.18
PPP4R3A-208ENST00000555462 PER1O15534 1290 aaPredicted RBP22.42■■□□□ 1.18
PPP4R3A-208ENST00000555462 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
PPP4R3A-208ENST00000555462 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
PPP4R3A-208ENST00000555462 DNMT1P26358 1616 aaKnown RBP22.42■■□□□ 1.18
PPP4R3A-208ENST00000555462 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
PPP4R3A-208ENST00000555462 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
PPP4R3A-208ENST00000555462 KIF14Q15058 1648 aa22.41■■□□□ 1.18
PPP4R3A-208ENST00000555462 KIAA0586Q9BVV6 1533 aa22.39■■□□□ 1.17
PPP4R3A-208ENST00000555462 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
PPP4R3A-208ENST00000555462 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
PPP4R3A-208ENST00000555462 BCAR3O75815 825 aa22.38■■□□□ 1.17
PPP4R3A-208ENST00000555462 NFKBIBQ15653 356 aa22.38■■□□□ 1.17
PPP4R3A-208ENST00000555462 KDM5CP41229 1560 aa22.37■■□□□ 1.17
PPP4R3A-208ENST00000555462 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
PPP4R3A-208ENST00000555462 SPINK5Q9NQ38 1064 aaPredicted RBP22.36■■□□□ 1.17
PPP4R3A-208ENST00000555462 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
PPP4R3A-208ENST00000555462 MBD5Q9P267 1494 aa22.35■■□□□ 1.17
PPP4R3A-208ENST00000555462 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
PPP4R3A-208ENST00000555462 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
PPP4R3A-208ENST00000555462 FRAT1Q92837 279 aaPredicted RBP22.34■■□□□ 1.17
PPP4R3A-208ENST00000555462 APAF1O14727 1248 aa22.33■■□□□ 1.17
PPP4R3A-208ENST00000555462 TESK2Q96S53 571 aa22.33■■□□□ 1.16
PPP4R3A-208ENST00000555462 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.16
PPP4R3A-208ENST00000555462 CCDC144AA2RUR9 1427 aa22.32■■□□□ 1.16
PPP4R3A-208ENST00000555462 TMF1P82094 1093 aa22.32■■□□□ 1.16
PPP4R3A-208ENST00000555462 BCL2L13Q9BXK5 485 aa22.31■■□□□ 1.16
PPP4R3A-208ENST00000555462 SLKQ9H2G2 1235 aaPredicted RBP22.31■■□□□ 1.16
PPP4R3A-208ENST00000555462 ARID4BQ4LE39 1312 aaPredicted RBP22.3■■□□□ 1.16
PPP4R3A-208ENST00000555462 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
PPP4R3A-208ENST00000555462 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
PPP4R3A-208ENST00000555462 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
PPP4R3A-208ENST00000555462 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
PPP4R3A-208ENST00000555462 CANXP27824 592 aaKnown RBP22.29■■□□□ 1.16
PPP4R3A-208ENST00000555462 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
PPP4R3A-208ENST00000555462 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
PPP4R3A-208ENST00000555462 PPM1GO15355 546 aaPredicted RBP22.28■■□□□ 1.16
PPP4R3A-208ENST00000555462 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
PPP4R3A-208ENST00000555462 PARD3Q8TEW0 1356 aa22.27■■□□□ 1.16
PPP4R3A-208ENST00000555462 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
PPP4R3A-208ENST00000555462 PPP2R1AP30153 589 aa22.27■■□□□ 1.16
PPP4R3A-208ENST00000555462 PRKCSHP14314 528 aaPredicted RBP22.25■■□□□ 1.15
PPP4R3A-208ENST00000555462 MS4A1P11836 297 aa22.25■■□□□ 1.15
PPP4R3A-208ENST00000555462 DUSP27Q5VZP5 1158 aa22.25■■□□□ 1.15
PPP4R3A-208ENST00000555462 GOLGA2Q08379 1002 aa22.25■■□□□ 1.15
PPP4R3A-208ENST00000555462 GSE1Q14687 1217 aa22.25■■□□□ 1.15
PPP4R3A-208ENST00000555462 PANK1Q8TE04 598 aa22.25■■□□□ 1.15
PPP4R3A-208ENST00000555462 CLUAP1Q96AJ1 413 aa22.24■■□□□ 1.15
PPP4R3A-208ENST00000555462 COG6Q9Y2V7 657 aa22.24■■□□□ 1.15
PPP4R3A-208ENST00000555462 SEC24BO95487 1268 aa22.22■■□□□ 1.15
PPP4R3A-208ENST00000555462 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
PPP4R3A-208ENST00000555462 CHGAP10645 457 aaKnown RBP22.21■■□□□ 1.15
PPP4R3A-208ENST00000555462 TNNQ9UQP3 1299 aa22.21■■□□□ 1.15
PPP4R3A-208ENST00000555462 IGHDP01880 384 aa22.21■■□□□ 1.15
PPP4R3A-208ENST00000555462 C8orf34Q49A92 452 aa22.21■■□□□ 1.15
PPP4R3A-208ENST00000555462 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
PPP4R3A-208ENST00000555462 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
PPP4R3A-208ENST00000555462 UHRF1BP1Q6BDS2 1440 aa22.18■■□□□ 1.14
PPP4R3A-208ENST00000555462 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
PPP4R3A-208ENST00000555462 ERBINQ96RT1 1412 aa22.16■■□□□ 1.14
PPP4R3A-208ENST00000555462 ATP10BO94823 1461 aa22.15■■□□□ 1.14
PPP4R3A-208ENST00000555462 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
PPP4R3A-208ENST00000555462 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
PPP4R3A-208ENST00000555462 POLR1AO95602 1720 aaPredicted RBP22.15■■□□□ 1.14
PPP4R3A-208ENST00000555462 CARMIL2Q6F5E8 1435 aa22.14■■□□□ 1.13
PPP4R3A-208ENST00000555462 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.13
PPP4R3A-208ENST00000555462 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
PPP4R3A-208ENST00000555462 KDM2BQ8NHM5 1336 aa22.12■■□□□ 1.13
PPP4R3A-208ENST00000555462 PLEKHH2Q8IVE3 1493 aa22.12■■□□□ 1.13
PPP4R3A-208ENST00000555462 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
PPP4R3A-208ENST00000555462 AFAP1Q8N556 730 aa22.12■■□□□ 1.13
PPP4R3A-208ENST00000555462 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
PPP4R3A-208ENST00000555462 POGKQ9P215 609 aa22.11■■□□□ 1.13
PPP4R3A-208ENST00000555462 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
PPP4R3A-208ENST00000555462 A2MP01023 1474 aa22.1■■□□□ 1.13
PPP4R3A-208ENST00000555462 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
PPP4R3A-208ENST00000555462 CFAP70Q5T0N1 1121 aa22.1■■□□□ 1.13
PPP4R3A-208ENST00000555462 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
PPP4R3A-208ENST00000555462 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
PPP4R3A-208ENST00000555462 SLFN5Q08AF3 891 aa22.08■■□□□ 1.13
PPP4R3A-208ENST00000555462 FAM135AQ9P2D6 1515 aa22.08■■□□□ 1.12
PPP4R3A-208ENST00000555462 ADGRL2O95490 1459 aa22.08■■□□□ 1.12
PPP4R3A-208ENST00000555462 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.12
PPP4R3A-208ENST00000555462 MAGI2Q86UL8 1455 aa22.06■■□□□ 1.12
PPP4R3A-208ENST00000555462 PTPRGP23470 1445 aa22.05■■□□□ 1.12
PPP4R3A-208ENST00000555462 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
PPP4R3A-208ENST00000555462 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
PPP4R3A-208ENST00000555462 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
PPP4R3A-208ENST00000555462 TRAK1Q9UPV9 953 aa22.01■■□□□ 1.11
PPP4R3A-208ENST00000555462 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
PPP4R3A-208ENST00000555462 COL17A1Q9UMD9 1497 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms