RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 KIF15Q9NS87 1388 aa10.65□□□□□ -0.71
LINC00641-201ENST00000555379 CALRP27797 417 aaKnown RBP10.64□□□□□ -0.71
LINC00641-201ENST00000555379 RPGRIP1LQ68CZ1 1315 aa10.64□□□□□ -0.71
LINC00641-201ENST00000555379 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
LINC00641-201ENST00000555379 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 DAPK1P53355 1430 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
LINC00641-201ENST00000555379 FGD6Q6ZV73 1430 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 TNNT3P45378 269 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 AMPHP49418 695 aa10.62□□□□□ -0.71
LINC00641-201ENST00000555379 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 NLRP13Q86W25 1043 aa10.62□□□□□ -0.71
LINC00641-201ENST00000555379 LAS1LQ9Y4W2 734 aaKnown RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 COG3Q96JB2 828 aa10.62□□□□□ -0.71
LINC00641-201ENST00000555379 A0A0U1RQG5 324 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 PSME1Q06323 249 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
LINC00641-201ENST00000555379 PPP4R2Q9NY27 417 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 FGD1P98174 961 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 SLC52A1Q9NWF4 448 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 STK26Q9P289 416 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00641-201ENST00000555379 KCNJ4P48050 445 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00641-201ENST00000555379 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
LINC00641-201ENST00000555379 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 AAMPQ13685 434 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 ATF3P18847 181 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
LINC00641-201ENST00000555379 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
LINC00641-201ENST00000555379 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
LINC00641-201ENST00000555379 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
LINC00641-201ENST00000555379 APPP05067 770 aa10.59□□□□□ -0.71
LINC00641-201ENST00000555379 RWDD1Q9H446 243 aaPredicted RBP10.59□□□□□ -0.71
LINC00641-201ENST00000555379 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
LINC00641-201ENST00000555379 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 ANKRD50Q9ULJ7 1429 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 LRRC9Q6ZRR7 1453 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
LINC00641-201ENST00000555379 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC00641-201ENST00000555379 GPRASP1Q5JY77 1395 aa10.57□□□□□ -0.72
LINC00641-201ENST00000555379 IQGAP2Q13576 1575 aa10.57□□□□□ -0.72
LINC00641-201ENST00000555379 TEX14Q8IWB6 1497 aa10.56□□□□□ -0.72
LINC00641-201ENST00000555379 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
LINC00641-201ENST00000555379 SIN3AQ96ST3 1273 aa10.56□□□□□ -0.72
LINC00641-201ENST00000555379 SMC4Q9NTJ3 1288 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 EVA1CP58658 441 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 DMRT2Q9Y5R5 561 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 G3V3G9 751 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 DCAF8Q5TAQ9 597 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
LINC00641-201ENST00000555379 PDE4CQ08493 712 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
LINC00641-201ENST00000555379 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 WDR97A6NE52 1622 aa10.53□□□□□ -0.72
LINC00641-201ENST00000555379 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
LINC00641-201ENST00000555379 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 BICRAQ9NZM4 1560 aa10.53□□□□□ -0.72
LINC00641-201ENST00000555379 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 NEUROD2Q15784 382 aa10.52□□□□□ -0.72
LINC00641-201ENST00000555379 PLEKHG5O94827 1062 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 GORABQ5T7V8 394 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 UBE2Q2Q8WVN8 375 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 FRAT1Q92837 279 aaPredicted RBP10.51□□□□□ -0.73
LINC00641-201ENST00000555379 HSCBQ8IWL3 235 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
LINC00641-201ENST00000555379 CNTLNQ9NXG0 1405 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 AKNAQ7Z591 1439 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 KIF14Q15058 1648 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 TEFQ10587 303 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 L3MBTL2Q969R5 705 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 THOC2Q8NI27 1593 aaKnown RBP10.49□□□□□ -0.73
LINC00641-201ENST00000555379 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 CHAF1AQ13111 956 aaPredicted RBP10.49□□□□□ -0.73
LINC00641-201ENST00000555379 ANKLE2Q86XL3 938 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 MIER1Q8N108 512 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 C9orf84Q5VXU9 1444 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms