RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
MTHFD1-210ENST00000555252 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.1
MTHFD1-210ENST00000555252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.4□□□□□ -0.1
MTHFD1-210ENST00000555252 FAM135AQ9P2D6 1515 aa14.4□□□□□ -0.1
MTHFD1-210ENST00000555252 UNC13BO14795 1591 aa14.4□□□□□ -0.1
MTHFD1-210ENST00000555252 PLXNC1O60486 1568 aa14.4□□□□□ -0.1
MTHFD1-210ENST00000555252 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
MTHFD1-210ENST00000555252 CCDC184Q52MB2 194 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 NUDCQ9Y266 331 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 CLASP1Q7Z460 1538 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 TTC37Q6PGP7 1564 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 SYCP2Q9BX26 1530 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 FAM9BQ8IZU0 186 aa14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 DHX29Q7Z478 1369 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-210ENST00000555252 ZNF326Q5BKZ1 582 aaKnown RBP14.37□□□□□ -0.11
MTHFD1-210ENST00000555252 RTL5Q5HYW3 569 aaPredicted RBP14.37□□□□□ -0.11
MTHFD1-210ENST00000555252 UHRF1BP1LA0JNW5 1464 aa14.37□□□□□ -0.11
MTHFD1-210ENST00000555252 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
MTHFD1-210ENST00000555252 ERCC6L2Q5T890 1561 aa14.35□□□□□ -0.11
MTHFD1-210ENST00000555252 DUOX2Q9NRD8 1548 aa14.35□□□□□ -0.11
MTHFD1-210ENST00000555252 CCDC144AA2RUR9 1427 aa14.34□□□□□ -0.11
MTHFD1-210ENST00000555252 ZBTB47Q9UFB7 747 aaPredicted RBP14.34□□□□□ -0.11
MTHFD1-210ENST00000555252 KTN1Q86UP2 1357 aaKnown RBP14.34□□□□□ -0.11
MTHFD1-210ENST00000555252 IQGAP3Q86VI3 1631 aa14.34□□□□□ -0.11
MTHFD1-210ENST00000555252 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
MTHFD1-210ENST00000555252 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
MTHFD1-210ENST00000555252 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
MTHFD1-210ENST00000555252 PLCH2O75038 1416 aa14.33□□□□□ -0.12
MTHFD1-210ENST00000555252 ERBINQ96RT1 1412 aa14.33□□□□□ -0.12
MTHFD1-210ENST00000555252 DCAF11Q8TEB1 546 aa14.32□□□□□ -0.12
MTHFD1-210ENST00000555252 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
MTHFD1-210ENST00000555252 ATP10AO60312 1499 aa14.31□□□□□ -0.12
MTHFD1-210ENST00000555252 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
MTHFD1-210ENST00000555252 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
MTHFD1-210ENST00000555252 PRAG1Q86YV5 1406 aa14.31□□□□□ -0.12
MTHFD1-210ENST00000555252 LAMC1P11047 1609 aa14.3□□□□□ -0.12
MTHFD1-210ENST00000555252 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-210ENST00000555252 NBR1Q14596 966 aa14.3□□□□□ -0.12
MTHFD1-210ENST00000555252 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
MTHFD1-210ENST00000555252 TRPM1Q7Z4N2 1603 aa14.29□□□□□ -0.12
MTHFD1-210ENST00000555252 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
MTHFD1-210ENST00000555252 GPRASP1Q5JY77 1395 aa14.28□□□□□ -0.12
MTHFD1-210ENST00000555252 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-210ENST00000555252 EIF2AK4Q9P2K8 1649 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-210ENST00000555252 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.12
MTHFD1-210ENST00000555252 POLR3GLQ9BT43 218 aa14.27□□□□□ -0.12
MTHFD1-210ENST00000555252 PLA2R1Q13018 1463 aa14.27□□□□□ -0.12
MTHFD1-210ENST00000555252 RALBP1Q15311 655 aa14.27□□□□□ -0.13
MTHFD1-210ENST00000555252 ABCC1P33527 1531 aa14.27□□□□□ -0.13
MTHFD1-210ENST00000555252 TCERG1O14776 1098 aaKnown RBP14.26□□□□□ -0.13
MTHFD1-210ENST00000555252 E9PCH4 1651 aa14.26□□□□□ -0.13
MTHFD1-210ENST00000555252 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
MTHFD1-210ENST00000555252 MS4A1P11836 297 aa14.24□□□□□ -0.13
MTHFD1-210ENST00000555252 A2MP01023 1474 aa14.24□□□□□ -0.13
MTHFD1-210ENST00000555252 BRD4O60885 1362 aaPredicted RBP14.24□□□□□ -0.13
MTHFD1-210ENST00000555252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■■□□ 16.7
MTHFD1-210ENST00000555252 LRPPRCP42704 1394 aaKnown RBP14.23□□□□□ -0.13
MTHFD1-210ENST00000555252 MYBBP1AQ9BQG0 1328 aaKnown RBP14.23□□□□□ -0.13
MTHFD1-210ENST00000555252 TMC1Q8TDI8 760 aa14.22□□□□□ -0.13
MTHFD1-210ENST00000555252 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
MTHFD1-210ENST00000555252 PPM1GO15355 546 aaPredicted RBP14.22□□□□□ -0.13
MTHFD1-210ENST00000555252 PNISRQ8TF01 805 aaKnown RBP14.22□□□□□ -0.13
MTHFD1-210ENST00000555252 STAC3Q96MF2 364 aa14.21□□□□□ -0.13
MTHFD1-210ENST00000555252 ZMYM4Q5VZL5 1548 aa14.21□□□□□ -0.13
MTHFD1-210ENST00000555252 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.13
MTHFD1-210ENST00000555252 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
MTHFD1-210ENST00000555252 TRAPPC8Q9Y2L5 1435 aa14.19□□□□□ -0.14
MTHFD1-210ENST00000555252 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
MTHFD1-210ENST00000555252 INSRP06213 1382 aa14.19□□□□□ -0.14
MTHFD1-210ENST00000555252 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-210ENST00000555252 PDE3BQ13370 1112 aa14.18□□□□□ -0.14
MTHFD1-210ENST00000555252 ZFYVE16Q7Z3T8 1539 aa14.17□□□□□ -0.14
MTHFD1-210ENST00000555252 RRP1P56182 461 aaKnown RBP14.16□□□□□ -0.14
MTHFD1-210ENST00000555252 WDR7Q9Y4E6 1490 aa14.16□□□□□ -0.14
MTHFD1-210ENST00000555252 RNF17Q9BXT8 1623 aaKnown RBP14.16□□□□□ -0.14
MTHFD1-210ENST00000555252 PARD3Q8TEW0 1356 aa14.16□□□□□ -0.14
MTHFD1-210ENST00000555252 NBPF1Q3BBV0 1214 aa14.16□□□□□ -0.14
MTHFD1-210ENST00000555252 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
MTHFD1-210ENST00000555252 TRPM2O94759 1503 aa14.15□□□□□ -0.14
MTHFD1-210ENST00000555252 NLRP13Q86W25 1043 aa14.15□□□□□ -0.14
MTHFD1-210ENST00000555252 DEPDC5O75140 1603 aa14.15□□□□□ -0.14
MTHFD1-210ENST00000555252 BACH2Q9BYV9 841 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 PTPRTO14522 1441 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 TMF1P82094 1093 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 TESK2Q96S53 571 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 ABCA9Q8IUA7 1624 aa14.14□□□□□ -0.15
MTHFD1-210ENST00000555252 PDE4AP27815 886 aa14.13□□□□□ -0.15
MTHFD1-210ENST00000555252 KANK1Q14678 1352 aa14.13□□□□□ -0.15
MTHFD1-210ENST00000555252 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
MTHFD1-210ENST00000555252 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
MTHFD1-210ENST00000555252 TET3O43151 1660 aa14.12□□□□□ -0.15
MTHFD1-210ENST00000555252 PER1O15534 1290 aaPredicted RBP14.12□□□□□ -0.15
MTHFD1-210ENST00000555252 CNGB1Q14028 1251 aaPredicted RBP14.12□□□□□ -0.15
MTHFD1-210ENST00000555252 CEP152O94986 1710 aa14.11□□□□□ -0.15
MTHFD1-210ENST00000555252 NEFMP07197 916 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms