RNA–Protein interactions for RNA: ENST00000555176.5

HNRNPC-217, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-217ENST00000555176 GAPVD1Q14C86 1478 aa5.18□□□□□ -1.58
HNRNPC-217ENST00000555176 ATAD2BQ9ULI0 1458 aa5.18□□□□□ -1.58
HNRNPC-217ENST00000555176 ARHGAP33O14559 1287 aa5.17□□□□□ -1.58
HNRNPC-217ENST00000555176 FAM69CQ0P6D2 419 aa5.17□□□□□ -1.58
HNRNPC-217ENST00000555176 KCTD12Q96CX2 325 aaKnown RBP5.17□□□□□ -1.58
HNRNPC-217ENST00000555176 TTBK1Q5TCY1 1321 aaPredicted RBP5.17□□□□□ -1.58
HNRNPC-217ENST00000555176 CHD1O14646 1710 aa5.17□□□□□ -1.58
HNRNPC-217ENST00000555176 ZNF608Q9ULD9 1512 aaPredicted RBP5.16□□□□□ -1.58
HNRNPC-217ENST00000555176 CEP164Q9UPV0 1460 aa5.15□□□□□ -1.58
HNRNPC-217ENST00000555176 LHX6Q9UPM6 363 aa5.15□□□□□ -1.59
HNRNPC-217ENST00000555176 CLASP1Q7Z460 1538 aa5.14□□□□□ -1.59
HNRNPC-217ENST00000555176 NUDT7P0C024 238 aa5.14□□□□□ -1.59
HNRNPC-217ENST00000555176 MED1Q15648 1581 aaPredicted RBP5.13□□□□□ -1.59
HNRNPC-217ENST00000555176 TOP2BQ02880 1626 aa5.13□□□□□ -1.59
HNRNPC-217ENST00000555176 BCANQ96GW7 911 aa5.13□□□□□ -1.59
HNRNPC-217ENST00000555176 CADPSQ9ULU8 1353 aa5.13□□□□□ -1.59
HNRNPC-217ENST00000555176 SRCAPQ6ZRS2 3230 aa5.13□□□□□ -1.59
HNRNPC-217ENST00000555176 ABCC10Q5T3U5 1492 aa5.13□□□□□ -1.59
HNRNPC-217ENST00000555176 STAC3Q96MF2 364 aa5.12□□□□□ -1.59
HNRNPC-217ENST00000555176 ACIN1Q9UKV3 1341 aaKnown RBP5.12□□□□□ -1.59
HNRNPC-217ENST00000555176 PCF11O94913 1555 aaKnown RBP5.12□□□□□ -1.59
HNRNPC-217ENST00000555176 PSDA5PKW4 1024 aaPredicted RBP5.11□□□□□ -1.59
HNRNPC-217ENST00000555176 SOX12O15370 315 aa5.11□□□□□ -1.59
HNRNPC-217ENST00000555176 GTPBP6O43824 516 aaPredicted RBP5.11□□□□□ -1.59
HNRNPC-217ENST00000555176 PTPN5P54829 565 aa5.11□□□□□ -1.59
HNRNPC-217ENST00000555176 LAPTM4AQ15012 233 aa5.11□□□□□ -1.59
HNRNPC-217ENST00000555176 EFCAB3Q8N7B9 438 aa5.11□□□□□ -1.59
HNRNPC-217ENST00000555176 SMARCA4P51532 1647 aa5.1□□□□□ -1.59
HNRNPC-217ENST00000555176 NLRP6P59044 892 aa5.1□□□□□ -1.59
HNRNPC-217ENST00000555176 SNAPC4Q5SXM2 1469 aa5.1□□□□□ -1.59
HNRNPC-217ENST00000555176 TRAF7Q6Q0C0 670 aa5.1□□□□□ -1.59
HNRNPC-217ENST00000555176 CLSPNQ9HAW4 1339 aa5.1□□□□□ -1.59
HNRNPC-217ENST00000555176 IFT140Q96RY7 1462 aa5.09□□□□□ -1.59
HNRNPC-217ENST00000555176 NKX1-1Q15270 411 aaPredicted RBP5.09□□□□□ -1.59
HNRNPC-217ENST00000555176 DMRTA1Q5VZB9 504 aa5.09□□□□□ -1.59
HNRNPC-217ENST00000555176 TSHZ2Q9NRE2 1034 aa5.09□□□□□ -1.59
HNRNPC-217ENST00000555176 LCE2BO14633 110 aa5.08□□□□□ -1.6
HNRNPC-217ENST00000555176 SLC34A2O95436 690 aa5.08□□□□□ -1.6
HNRNPC-217ENST00000555176 BAZ1BQ9UIG0 1483 aaKnown RBP5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 WDR70Q9NW82 654 aa5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 PCDHGA4Q9Y5G9 962 aa5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 EIF4G3O43432 1585 aaKnown RBP5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 DIP2BQ9P265 1576 aa5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 URB2Q14146 1524 aaKnown RBP5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 FANCD2Q9BXW9 1451 aa5.07□□□□□ -1.6
HNRNPC-217ENST00000555176 NBR1Q14596 966 aa5.06□□□□□ -1.6
HNRNPC-217ENST00000555176 P3H3Q8IVL6 736 aa5.06□□□□□ -1.6
HNRNPC-217ENST00000555176 PSEN2P49810 448 aa5.05□□□□□ -1.6
HNRNPC-217ENST00000555176 HSPA2P54652 639 aa5.05□□□□□ -1.6
HNRNPC-217ENST00000555176 SYNJ1O43426 1573 aa5.04□□□□□ -1.6
HNRNPC-217ENST00000555176 LOC105371045A0A1W2PR82 267 aa5.04□□□□□ -1.6
HNRNPC-217ENST00000555176 THSD4Q6ZMP0 1018 aa5.04□□□□□ -1.6
HNRNPC-217ENST00000555176 MS4A4AQ96JQ5 239 aa5.04□□□□□ -1.6
HNRNPC-217ENST00000555176 PTPRMP28827 1452 aa5.03□□□□□ -1.6
HNRNPC-217ENST00000555176 KIF3CO14782 793 aa5.03□□□□□ -1.6
HNRNPC-217ENST00000555176 CCER1Q8TC90 406 aaPredicted RBP5.03□□□□□ -1.6
HNRNPC-217ENST00000555176 MFRPQ9BY79 579 aa5.03□□□□□ -1.6
HNRNPC-217ENST00000555176 KDM2AQ9Y2K7 1162 aa5.03□□□□□ -1.6
HNRNPC-217ENST00000555176 DIEXFQ68CQ4 756 aaKnown RBP5.02□□□□□ -1.61
HNRNPC-217ENST00000555176 GTF3C3Q9Y5Q9 886 aa5.02□□□□□ -1.61
HNRNPC-217ENST00000555176 LTBP4Q8N2S1 1624 aa5.01□□□□□ -1.61
HNRNPC-217ENST00000555176 TSPOAP1O95153 1857 aa5.01□□□□□ -1.61
HNRNPC-217ENST00000555176 ZNF787Q6DD87 383 aa5.01□□□□□ -1.61
HNRNPC-217ENST00000555176 ZNF775Q96BV0 537 aaPredicted RBP5.01□□□□□ -1.61
HNRNPC-217ENST00000555176 AQRO60306 1485 aaKnown RBP eCLIP5□□□□□ -1.615e-7■■■■■ 29.3
HNRNPC-217ENST00000555176 IQSEC2Q5JU85 1478 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 TULP1O00294 542 aaPredicted RBP5□□□□□ -1.61
HNRNPC-217ENST00000555176 GFRA3O60609 400 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 ITGBL1O95965 494 aaPredicted RBP5□□□□□ -1.61
HNRNPC-217ENST00000555176 NEUROD1Q13562 356 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 FBXO22Q8NEZ5 403 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 PHF8Q9UPP1 1060 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 VPS9D1Q9Y2B5 631 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 MAPKBP1O60336 1514 aa5□□□□□ -1.61
HNRNPC-217ENST00000555176 COL17A1Q9UMD9 1497 aaPredicted RBP5□□□□□ -1.61
HNRNPC-217ENST00000555176 WRNQ14191 1432 aaPredicted RBP eCLIP4.99□□□□□ -1.61
HNRNPC-217ENST00000555176 C2orf72A6NCS6 295 aa4.99□□□□□ -1.61
HNRNPC-217ENST00000555176 PDE4AP27815 886 aa4.98□□□□□ -1.61
HNRNPC-217ENST00000555176 CHMP7Q8WUX9 453 aaPredicted RBP4.98□□□□□ -1.61
HNRNPC-217ENST00000555176 KCNH8Q96L42 1107 aa4.98□□□□□ -1.61
HNRNPC-217ENST00000555176 SLC4A5Q9BY07 1137 aa4.98□□□□□ -1.61
HNRNPC-217ENST00000555176 BHMG1C9JSJ3 638 aaPredicted RBP4.97□□□□□ -1.61
HNRNPC-217ENST00000555176 PPP4R3BQ5MIZ7 849 aa4.97□□□□□ -1.61
HNRNPC-217ENST00000555176 WNT2BQ93097 391 aa4.97□□□□□ -1.61
HNRNPC-217ENST00000555176 PTPRTO14522 1441 aa4.97□□□□□ -1.61
HNRNPC-217ENST00000555176 EEA1Q15075 1411 aa4.97□□□□□ -1.61
HNRNPC-217ENST00000555176 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
HNRNPC-217ENST00000555176 GOLGA8CPA6NN73 597 aa4.96□□□□□ -1.62
HNRNPC-217ENST00000555176 HSPA1LP34931 641 aa4.96□□□□□ -1.62
HNRNPC-217ENST00000555176 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
HNRNPC-217ENST00000555176 RGS17Q9UGC6 210 aaPredicted RBP4.96□□□□□ -1.62
HNRNPC-217ENST00000555176 UBAP1LF5GYI3 381 aa4.95□□□□□ -1.62
HNRNPC-217ENST00000555176 NRG2O14511 850 aaPredicted RBP4.95□□□□□ -1.62
HNRNPC-217ENST00000555176 UPF1Q92900 1129 aaKnown RBP eCLIP4.94□□□□□ -1.62
HNRNPC-217ENST00000555176 KCNK17Q96T54 332 aa4.94□□□□□ -1.62
HNRNPC-217ENST00000555176 E2F4Q16254 413 aa4.93□□□□□ -1.62
HNRNPC-217ENST00000555176 TMC2Q8TDI7 906 aa4.93□□□□□ -1.62
HNRNPC-217ENST00000555176 ARHGEF1Q92888 912 aaKnown RBP4.93□□□□□ -1.62
HNRNPC-217ENST00000555176 DDX27Q96GQ7 796 aaKnown RBP4.93□□□□□ -1.62
HNRNPC-217ENST00000555176 PPP1R37O75864 691 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms