RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
KTN1-219ENST00000555164 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
KTN1-219ENST00000555164 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
KTN1-219ENST00000555164 PDIA6Q15084 440 aa10.73□□□□□ -0.69
KTN1-219ENST00000555164 COL9A1P20849 921 aa10.72□□□□□ -0.69
KTN1-219ENST00000555164 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
KTN1-219ENST00000555164 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
KTN1-219ENST00000555164 PROX2Q3B8N5 592 aa10.71□□□□□ -0.69
KTN1-219ENST00000555164 WNT2BQ93097 391 aa10.71□□□□□ -0.69
KTN1-219ENST00000555164 SPDYE16A6NNV3 312 aaPredicted RBP10.7□□□□□ -0.7
KTN1-219ENST00000555164 PTPN5P54829 565 aa10.7□□□□□ -0.7
KTN1-219ENST00000555164 DDX12PQ92771 950 aa10.7□□□□□ -0.7
KTN1-219ENST00000555164 E2F4Q16254 413 aa10.69□□□□□ -0.7
KTN1-219ENST00000555164 C6orf132Q5T0Z8 1188 aa10.69□□□□□ -0.7
KTN1-219ENST00000555164 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
KTN1-219ENST00000555164 RBM33Q96EV2 1170 aaKnown RBP10.67□□□□□ -0.7
KTN1-219ENST00000555164 NBR1Q14596 966 aa10.66□□□□□ -0.7
KTN1-219ENST00000555164 ONECUT3O60422 494 aaPredicted RBP10.65□□□□□ -0.7
KTN1-219ENST00000555164 EN1Q05925 392 aaPredicted RBP10.65□□□□□ -0.7
KTN1-219ENST00000555164 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
KTN1-219ENST00000555164 ANKK1Q8NFD2 765 aa10.65□□□□□ -0.7
KTN1-219ENST00000555164 ARIH1Q9Y4X5 557 aaPredicted RBP10.65□□□□□ -0.7
KTN1-219ENST00000555164 MAP3K7O43318 606 aa10.63□□□□□ -0.71
KTN1-219ENST00000555164 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
KTN1-219ENST00000555164 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
KTN1-219ENST00000555164 TSR1Q2NL82 804 aaKnown RBP10.58□□□□□ -0.72
KTN1-219ENST00000555164 IFFO2Q5TF58 517 aa10.58□□□□□ -0.72
KTN1-219ENST00000555164 ZFRQ96KR1 1074 aaKnown RBP10.58□□□□□ -0.72
KTN1-219ENST00000555164 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
KTN1-219ENST00000555164 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
KTN1-219ENST00000555164 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
KTN1-219ENST00000555164 BCAMP50895 628 aa10.56□□□□□ -0.72
KTN1-219ENST00000555164 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
KTN1-219ENST00000555164 CERKQ8TCT0 537 aa10.55□□□□□ -0.72
KTN1-219ENST00000555164 NYAP1Q6ZVC0 841 aa10.54□□□□□ -0.72
KTN1-219ENST00000555164 PACS2Q86VP3 889 aa10.54□□□□□ -0.72
KTN1-219ENST00000555164 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
KTN1-219ENST00000555164 PRIM1P49642 420 aaKnown RBP10.51□□□□□ -0.73
KTN1-219ENST00000555164 LRCH3Q96II8 777 aa10.51□□□□□ -0.73
KTN1-219ENST00000555164 PRSS12P56730 875 aa10.5□□□□□ -0.73
KTN1-219ENST00000555164 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
KTN1-219ENST00000555164 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
KTN1-219ENST00000555164 A0A0G2JS52 829 aa10.49□□□□□ -0.73
KTN1-219ENST00000555164 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
KTN1-219ENST00000555164 NBPF26B4DH59 902 aa10.48□□□□□ -0.73
KTN1-219ENST00000555164 OSBPP22059 807 aa10.48□□□□□ -0.73
KTN1-219ENST00000555164 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
KTN1-219ENST00000555164 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
KTN1-219ENST00000555164 RGS20O76081 388 aa10.47□□□□□ -0.73
KTN1-219ENST00000555164 CDHR5Q9HBB8 845 aa10.47□□□□□ -0.73
KTN1-219ENST00000555164 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
KTN1-219ENST00000555164 TSR3Q9UJK0 312 aaKnown RBP10.47□□□□□ -0.73
KTN1-219ENST00000555164 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
KTN1-219ENST00000555164 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
KTN1-219ENST00000555164 FAM198AQ9UFP1 575 aa10.44□□□□□ -0.74
KTN1-219ENST00000555164 SMAPO00193 183 aa10.42□□□□□ -0.74
KTN1-219ENST00000555164 KCNV2Q8TDN2 545 aa10.42□□□□□ -0.74
KTN1-219ENST00000555164 TATDN2Q93075 761 aa10.42□□□□□ -0.74
KTN1-219ENST00000555164 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
KTN1-219ENST00000555164 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
KTN1-219ENST00000555164 PPP4CP60510 307 aa10.39□□□□□ -0.75
KTN1-219ENST00000555164 KCNC4Q03721 635 aa10.39□□□□□ -0.75
KTN1-219ENST00000555164 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
KTN1-219ENST00000555164 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
KTN1-219ENST00000555164 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
KTN1-219ENST00000555164 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
KTN1-219ENST00000555164 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
KTN1-219ENST00000555164 MLLT3P42568 568 aaPredicted RBP10.35□□□□□ -0.75
KTN1-219ENST00000555164 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
KTN1-219ENST00000555164 NPDC1Q9NQX5 325 aaPredicted RBP10.35□□□□□ -0.75
KTN1-219ENST00000555164 RNF40O75150 1001 aa10.33□□□□□ -0.76
KTN1-219ENST00000555164 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
KTN1-219ENST00000555164 SLC4A3P48751 1232 aa10.29□□□□□ -0.76
KTN1-219ENST00000555164 SLF2Q8IX21 1173 aa10.29□□□□□ -0.76
KTN1-219ENST00000555164 IRX2Q9BZI1 471 aaPredicted RBP10.29□□□□□ -0.76
KTN1-219ENST00000555164 PTGDRQ13258 359 aa10.28□□□□□ -0.76
KTN1-219ENST00000555164 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
KTN1-219ENST00000555164 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
KTN1-219ENST00000555164 MTRQ99707 1265 aa10.27□□□□□ -0.77
KTN1-219ENST00000555164 IL21Q9HBE4 155 aa10.27□□□□□ -0.77
KTN1-219ENST00000555164 PLCB2Q00722 1185 aa10.26□□□□□ -0.77
KTN1-219ENST00000555164 EYA1Q99502 592 aa10.26□□□□□ -0.77
KTN1-219ENST00000555164 APLP1P51693 650 aa10.25□□□□□ -0.77
KTN1-219ENST00000555164 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
KTN1-219ENST00000555164 SEMA3EO15041 775 aa10.22□□□□□ -0.77
KTN1-219ENST00000555164 DNAJB2P25686 324 aa10.22□□□□□ -0.77
KTN1-219ENST00000555164 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
KTN1-219ENST00000555164 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
KTN1-219ENST00000555164 ADGRG1Q9Y653 693 aa10.21□□□□□ -0.77
KTN1-219ENST00000555164 FCHSD2O94868 740 aa10.2□□□□□ -0.78
KTN1-219ENST00000555164 ZNF516Q92618 1163 aa10.17□□□□□ -0.78
KTN1-219ENST00000555164 TMEM134Q9H6X4 195 aa10.17□□□□□ -0.78
KTN1-219ENST00000555164 COPS2P61201 443 aa10.16□□□□□ -0.78
KTN1-219ENST00000555164 TESPA1A2RU30 521 aaPredicted RBP10.15□□□□□ -0.78
KTN1-219ENST00000555164 PPP1R18Q6NYC8 613 aa10.15□□□□□ -0.78
KTN1-219ENST00000555164 RCCD1A6NED2 376 aa10.14□□□□□ -0.79
KTN1-219ENST00000555164 SMYD5Q6GMV2 418 aa10.14□□□□□ -0.79
KTN1-219ENST00000555164 PCDHB3Q9Y5E6 796 aa10.14□□□□□ -0.79
KTN1-219ENST00000555164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
KTN1-219ENST00000555164 HIC1Q14526 733 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms