RNA–Protein interactions for RNA: ENST00000555050.1

PSMA6-210, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-210ENST00000555050 COL9A1P20849 921 aa13.02□□□□□ -0.33
PSMA6-210ENST00000555050 PDIA6Q15084 440 aa13.02□□□□□ -0.33
PSMA6-210ENST00000555050 NBPF3Q9H094 633 aa13□□□□□ -0.33
PSMA6-210ENST00000555050 E2F4Q16254 413 aa12.99□□□□□ -0.33
PSMA6-210ENST00000555050 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
PSMA6-210ENST00000555050 DDX12PQ92771 950 aa12.98□□□□□ -0.33
PSMA6-210ENST00000555050 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
PSMA6-210ENST00000555050 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
PSMA6-210ENST00000555050 C6orf132Q5T0Z8 1188 aa12.97□□□□□ -0.33
PSMA6-210ENST00000555050 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
PSMA6-210ENST00000555050 ARIH1Q9Y4X5 557 aaPredicted RBP12.97□□□□□ -0.33
PSMA6-210ENST00000555050 WDR70Q9NW82 654 aa12.96□□□□□ -0.33
PSMA6-210ENST00000555050 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
PSMA6-210ENST00000555050 THSD4Q6ZMP0 1018 aa12.95□□□□□ -0.34
PSMA6-210ENST00000555050 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
PSMA6-210ENST00000555050 WNT2BQ93097 391 aa12.93□□□□□ -0.34
PSMA6-210ENST00000555050 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
PSMA6-210ENST00000555050 NBR1Q14596 966 aa12.92□□□□□ -0.34
PSMA6-210ENST00000555050 PTPN5P54829 565 aa12.91□□□□□ -0.34
PSMA6-210ENST00000555050 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
PSMA6-210ENST00000555050 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
PSMA6-210ENST00000555050 LAPTM4BQ86VI4 370 aa12.88□□□□□ -0.35
PSMA6-210ENST00000555050 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
PSMA6-210ENST00000555050 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
PSMA6-210ENST00000555050 MAP3K7O43318 606 aa12.86□□□□□ -0.35
PSMA6-210ENST00000555050 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
PSMA6-210ENST00000555050 ANKK1Q8NFD2 765 aa12.84□□□□□ -0.35
PSMA6-210ENST00000555050 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
PSMA6-210ENST00000555050 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
PSMA6-210ENST00000555050 SEPT9Q9UHD8 586 aaPredicted RBP12.81□□□□□ -0.36
PSMA6-210ENST00000555050 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
PSMA6-210ENST00000555050 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
PSMA6-210ENST00000555050 SOWAHBA6NEL2 793 aa12.78□□□□□ -0.36
PSMA6-210ENST00000555050 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
PSMA6-210ENST00000555050 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
PSMA6-210ENST00000555050 OSBPP22059 807 aa12.77□□□□□ -0.37
PSMA6-210ENST00000555050 BCAMP50895 628 aa12.77□□□□□ -0.37
PSMA6-210ENST00000555050 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
PSMA6-210ENST00000555050 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
PSMA6-210ENST00000555050 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
PSMA6-210ENST00000555050 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
PSMA6-210ENST00000555050 PRSS12P56730 875 aa12.73□□□□□ -0.37
PSMA6-210ENST00000555050 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
PSMA6-210ENST00000555050 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
PSMA6-210ENST00000555050 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
PSMA6-210ENST00000555050 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
PSMA6-210ENST00000555050 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
PSMA6-210ENST00000555050 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
PSMA6-210ENST00000555050 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
PSMA6-210ENST00000555050 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
PSMA6-210ENST00000555050 RBM27Q9P2N5 1060 aaKnown RBP12.68□□□□□ -0.38
PSMA6-210ENST00000555050 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
PSMA6-210ENST00000555050 NBPF26B4DH59 902 aa12.65□□□□□ -0.38
PSMA6-210ENST00000555050 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
PSMA6-210ENST00000555050 A0A0G2JS52 829 aa12.64□□□□□ -0.39
PSMA6-210ENST00000555050 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
PSMA6-210ENST00000555050 SMAPO00193 183 aa12.64□□□□□ -0.39
PSMA6-210ENST00000555050 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
PSMA6-210ENST00000555050 TATDN2Q93075 761 aa12.63□□□□□ -0.39
PSMA6-210ENST00000555050 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
PSMA6-210ENST00000555050 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
PSMA6-210ENST00000555050 TTC13Q8NBP0 860 aa12.61□□□□□ -0.39
PSMA6-210ENST00000555050 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
PSMA6-210ENST00000555050 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
PSMA6-210ENST00000555050 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
PSMA6-210ENST00000555050 RGS20O76081 388 aa12.59□□□□□ -0.39
PSMA6-210ENST00000555050 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
PSMA6-210ENST00000555050 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
PSMA6-210ENST00000555050 PADI6Q6TGC4 694 aa12.57□□□□□ -0.4
PSMA6-210ENST00000555050 PPP4CP60510 307 aa12.55□□□□□ -0.4
PSMA6-210ENST00000555050 KCNC4Q03721 635 aa12.53□□□□□ -0.4
PSMA6-210ENST00000555050 PTGDRQ13258 359 aa12.49□□□□□ -0.41
PSMA6-210ENST00000555050 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
PSMA6-210ENST00000555050 SEMA3EO15041 775 aa12.47□□□□□ -0.41
PSMA6-210ENST00000555050 EYA1Q99502 592 aa12.47□□□□□ -0.41
PSMA6-210ENST00000555050 RNF40O75150 1001 aa12.45□□□□□ -0.42
PSMA6-210ENST00000555050 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
PSMA6-210ENST00000555050 TJAP1Q5JTD0 557 aa12.44□□□□□ -0.42
PSMA6-210ENST00000555050 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
PSMA6-210ENST00000555050 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
PSMA6-210ENST00000555050 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
PSMA6-210ENST00000555050 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
PSMA6-210ENST00000555050 APLP1P51693 650 aa12.41□□□□□ -0.42
PSMA6-210ENST00000555050 MTRQ99707 1265 aa12.41□□□□□ -0.42
PSMA6-210ENST00000555050 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
PSMA6-210ENST00000555050 IL21Q9HBE4 155 aa12.39□□□□□ -0.43
PSMA6-210ENST00000555050 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
PSMA6-210ENST00000555050 FCHSD2O94868 740 aa12.38□□□□□ -0.43
PSMA6-210ENST00000555050 RBM46Q8TBY0 533 aaKnown RBP12.38□□□□□ -0.43
PSMA6-210ENST00000555050 DNAJB2P25686 324 aa12.37□□□□□ -0.43
PSMA6-210ENST00000555050 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
PSMA6-210ENST00000555050 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
PSMA6-210ENST00000555050 TMEM134Q9H6X4 195 aa12.34□□□□□ -0.43
PSMA6-210ENST00000555050 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
PSMA6-210ENST00000555050 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
PSMA6-210ENST00000555050 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
PSMA6-210ENST00000555050 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
PSMA6-210ENST00000555050 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
PSMA6-210ENST00000555050 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
PSMA6-210ENST00000555050 HIC1Q14526 733 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms