RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	MAP3K7	O43318	606 aa		12.17	□□□□□ -0.46
PSMC6-208	ENST00000554956	TSR1	Q2NL82	804 aa	Known RBP	12.17	□□□□□ -0.46
PSMC6-208	ENST00000554956	PBX2	P40425	430 aa		12.15	□□□□□ -0.46
PSMC6-208	ENST00000554956	DMRTA1	Q5VZB9	504 aa		12.15	□□□□□ -0.46
PSMC6-208	ENST00000554956	ARHGAP33	O14559	1287 aa		12.14	□□□□□ -0.47
PSMC6-208	ENST00000554956	PTPRE	P23469	700 aa		12.14	□□□□□ -0.47
PSMC6-208	ENST00000554956	CDHR5	Q9HBB8	845 aa		12.14	□□□□□ -0.47
PSMC6-208	ENST00000554956	COL9A1	P20849	921 aa		12.13	□□□□□ -0.47
PSMC6-208	ENST00000554956	C6orf132	Q5T0Z8	1188 aa		12.13	□□□□□ -0.47
PSMC6-208	ENST00000554956	RBM26	Q5T8P6	1007 aa	Known RBP	12.12	□□□□□ -0.47
PSMC6-208	ENST00000554956	LSM11	P83369	360 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
PSMC6-208	ENST00000554956	SMYD5	Q6GMV2	418 aa		12.09	□□□□□ -0.47
PSMC6-208	ENST00000554956	KCNH8	Q96L42	1107 aa		12.09	□□□□□ -0.47
PSMC6-208	ENST00000554956	ANKRD13D	Q6ZTN6	518 aa		12.08	□□□□□ -0.48
PSMC6-208	ENST00000554956	PPP1R3G	B7ZBB8	358 aa		12.07	□□□□□ -0.48
PSMC6-208	ENST00000554956	PCDH10	Q9P2E7	1040 aa		12.07	□□□□□ -0.48
PSMC6-208	ENST00000554956	NUTM2F	A1L443	756 aa		12.06	□□□□□ -0.48
PSMC6-208	ENST00000554956	ZBED2	Q9BTP6	218 aa		12.05	□□□□□ -0.48
PSMC6-208	ENST00000554956	PROX2	Q3B8N5	592 aa		12.04	□□□□□ -0.48
PSMC6-208	ENST00000554956	BCAN	Q96GW7	911 aa		12.04	□□□□□ -0.48
PSMC6-208	ENST00000554956	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMC6-208	ENST00000554956	TULP1	O00294	542 aa	Predicted RBP	12.01	□□□□□ -0.49
PSMC6-208	ENST00000554956	ADGRD1	Q6QNK2	874 aa		12.01	□□□□□ -0.49
PSMC6-208	ENST00000554956	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
PSMC6-208	ENST00000554956	VPS9D1	Q9Y2B5	631 aa		12.01	□□□□□ -0.49
PSMC6-208	ENST00000554956	LMOD2	Q6P5Q4	547 aa		12	□□□□□ -0.49
PSMC6-208	ENST00000554956	PTGDR	Q13258	359 aa		11.99	□□□□□ -0.49
PSMC6-208	ENST00000554956	TK2	O00142	265 aa		11.98	□□□□□ -0.49
PSMC6-208	ENST00000554956	GPR37	O15354	613 aa		11.98	□□□□□ -0.49
PSMC6-208	ENST00000554956	GPIHBP1	Q8IV16	184 aa		11.98	□□□□□ -0.49
PSMC6-208	ENST00000554956	SLC4A5	Q9BY07	1137 aa		11.97	□□□□□ -0.49
PSMC6-208	ENST00000554956	FAM198A	Q9UFP1	575 aa		11.97	□□□□□ -0.49
PSMC6-208	ENST00000554956	PRSS12	P56730	875 aa		11.96	□□□□□ -0.49
PSMC6-208	ENST00000554956	CDCA7L	Q96GN5	454 aa		11.96	□□□□□ -0.49
PSMC6-208	ENST00000554956	TSKS	Q9UJT2	592 aa		11.96	□□□□□ -0.49
PSMC6-208	ENST00000554956	TRIM6-TRIM34	B2RNG4	842 aa		11.95	□□□□□ -0.5
PSMC6-208	ENST00000554956	FCHSD2	O94868	740 aa		11.95	□□□□□ -0.5
PSMC6-208	ENST00000554956	PADI6	Q6TGC4	694 aa		11.95	□□□□□ -0.5
PSMC6-208	ENST00000554956	CERK	Q8TCT0	537 aa		11.95	□□□□□ -0.5
PSMC6-208	ENST00000554956	HR	O43593	1189 aa		11.94	□□□□□ -0.5
PSMC6-208	ENST00000554956	SPNS2	Q8IVW8	549 aa		11.94	□□□□□ -0.5
PSMC6-208	ENST00000554956	KIAA1468	Q9P260	1216 aa		11.93	□□□□□ -0.5
PSMC6-208	ENST00000554956	C3orf80	F5H4A9	247 aa		11.92	□□□□□ -0.5
PSMC6-208	ENST00000554956	FECH	P22830	423 aa		11.91	□□□□□ -0.5
PSMC6-208	ENST00000554956	RABGEF1	Q9UJ41	708 aa		11.9	□□□□□ -0.5
PSMC6-208	ENST00000554956	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.89	□□□□□ -0.51
PSMC6-208	ENST00000554956	HIC1	Q14526	733 aa		11.89	□□□□□ -0.51
PSMC6-208	ENST00000554956	TTC13	Q8NBP0	860 aa		11.89	□□□□□ -0.51
PSMC6-208	ENST00000554956	RBM27	Q9P2N5	1060 aa	Known RBP	11.89	□□□□□ -0.51
PSMC6-208	ENST00000554956	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.89	□□□□□ -0.51
PSMC6-208	ENST00000554956	SMAP	O00193	183 aa		11.87	□□□□□ -0.51
PSMC6-208	ENST00000554956	GNPAT	O15228	680 aa		11.87	□□□□□ -0.51
PSMC6-208	ENST00000554956	ONECUT3	O60422	494 aa	Predicted RBP	11.87	□□□□□ -0.51
PSMC6-208	ENST00000554956	FAM161A	Q3B820	660 aa		11.87	□□□□□ -0.51
PSMC6-208	ENST00000554956	PACS2	Q86VP3	889 aa		11.86	□□□□□ -0.51
PSMC6-208	ENST00000554956	ZC3H15	Q8WU90	426 aa	Known RBP	11.85	□□□□□ -0.51
PSMC6-208	ENST00000554956	NBPF3	Q9H094	633 aa		11.85	□□□□□ -0.51
PSMC6-208	ENST00000554956	NUDT18	Q6ZVK8	323 aa		11.84	□□□□□ -0.51
PSMC6-208	ENST00000554956	MRPL50	Q8N5N7	158 aa	Known RBP	11.84	□□□□□ -0.51
PSMC6-208	ENST00000554956	PNMA3	Q9UL41	463 aa		11.84	□□□□□ -0.51
PSMC6-208	ENST00000554956	MYT1L	Q9UL68	1186 aa		11.84	□□□□□ -0.51
PSMC6-208	ENST00000554956	NBPF26	B4DH59	902 aa		11.83	□□□□□ -0.52
PSMC6-208	ENST00000554956	TATDN2	Q93075	761 aa		11.83	□□□□□ -0.52
PSMC6-208	ENST00000554956	STAC3	Q96MF2	364 aa		11.83	□□□□□ -0.52
PSMC6-208	ENST00000554956	MMRN1	Q13201	1228 aa		11.82	□□□□□ -0.52
PSMC6-208	ENST00000554956	ADGRG1	Q9Y653	693 aa		11.81	□□□□□ -0.52
PSMC6-208	ENST00000554956	PLSCR2	Q9NRY7	297 aa		11.79	□□□□□ -0.52
PSMC6-208	ENST00000554956	FAM98C	Q17RN3	349 aa	Known RBP	11.78	□□□□□ -0.52
PSMC6-208	ENST00000554956	ZMYND10	O75800	440 aa		11.77	□□□□□ -0.53
PSMC6-208	ENST00000554956	LAPTM4B	Q86VI4	370 aa		11.77	□□□□□ -0.53
PSMC6-208	ENST00000554956	RNF166	Q96A37	237 aa	Predicted RBP	11.77	□□□□□ -0.53
PSMC6-208	ENST00000554956	KCTD12	Q96CX2	325 aa	Known RBP	11.77	□□□□□ -0.53
PSMC6-208	ENST00000554956	EYA1	Q99502	592 aa		11.77	□□□□□ -0.53
PSMC6-208	ENST00000554956	GOLGA8CP	A6NN73	597 aa		11.76	□□□□□ -0.53
PSMC6-208	ENST00000554956	ZFR	Q96KR1	1074 aa	Known RBP	11.76	□□□□□ -0.53
PSMC6-208	ENST00000554956	MAP2K5	Q13163	448 aa		11.75	□□□□□ -0.53
PSMC6-208	ENST00000554956	BARGIN	Q6ZT62	677 aa		11.74	□□□□□ -0.53
PSMC6-208	ENST00000554956	RBM46	Q8TBY0	533 aa	Known RBP	11.74	□□□□□ -0.53
PSMC6-208	ENST00000554956	METTL3	Q86U44	580 aa	Known RBP	11.73	□□□□□ -0.53
PSMC6-208	ENST00000554956	PXYLP1	Q8TE99	480 aa		11.73	□□□□□ -0.53
PSMC6-208	ENST00000554956	NLRP7	Q8WX94	980 aa		11.73	□□□□□ -0.53
PSMC6-208	ENST00000554956	WNT2B	Q93097	391 aa		11.73	□□□□□ -0.53
PSMC6-208	ENST00000554956	CCDC102A	Q96A19	550 aa		11.72	□□□□□ -0.53
PSMC6-208	ENST00000554956	PHOX2B	Q99453	314 aa		11.72	□□□□□ -0.53
PSMC6-208	ENST00000554956	IRF6	O14896	467 aa		11.71	□□□□□ -0.53
PSMC6-208	ENST00000554956	BCAM	P50895	628 aa		11.71	□□□□□ -0.53
PSMC6-208	ENST00000554956	ANKK1	Q8NFD2	765 aa		11.71	□□□□□ -0.53
PSMC6-208	ENST00000554956	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.7	□□□□□ -0.54
PSMC6-208	ENST00000554956	RCCD1	A6NED2	376 aa		11.7	□□□□□ -0.54
PSMC6-208	ENST00000554956	OAT	P04181	439 aa		11.7	□□□□□ -0.54
PSMC6-208	ENST00000554956	SAMD7	Q7Z3H4	446 aa		11.7	□□□□□ -0.54
PSMC6-208	ENST00000554956	KRI1	Q8N9T8	703 aa	Known RBP	11.7	□□□□□ -0.54
PSMC6-208	ENST00000554956	THSD4	Q6ZMP0	1018 aa		11.69	□□□□□ -0.54
PSMC6-208	ENST00000554956	SWT1	Q5T5J6	900 aa	Known RBP	11.68	□□□□□ -0.54
PSMC6-208	ENST00000554956	DNAJB2	P25686	324 aa		11.67	□□□□□ -0.54
PSMC6-208	ENST00000554956	SOWAHB	A6NEL2	793 aa		11.66	□□□□□ -0.54
PSMC6-208	ENST00000554956	LRCH3	Q96II8	777 aa		11.66	□□□□□ -0.54
PSMC6-208	ENST00000554956	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.66	□□□□□ -0.54
PSMC6-208	ENST00000554956	PTPN5	P54829	565 aa		11.65	□□□□□ -0.54
PSMC6-208	ENST00000554956	TMEM134	Q9H6X4	195 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms