RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 RALBP1Q15311 655 aa22.26■■□□□ 1.15
XRCC3-209ENST00000554913 TSPY4P0CV99 314 aa22.26■■□□□ 1.15
XRCC3-209ENST00000554913 TSPY10P0CW01 314 aa22.26■■□□□ 1.15
XRCC3-209ENST00000554913 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
XRCC3-209ENST00000554913 SALL2Q9Y467 1007 aaPredicted RBP22.24■■□□□ 1.15
XRCC3-209ENST00000554913 ABCC10Q5T3U5 1492 aa22.24■■□□□ 1.15
XRCC3-209ENST00000554913 SHANK2Q9UPX8 1470 aa22.24■■□□□ 1.15
XRCC3-209ENST00000554913 ANP32AP39687 249 aaKnown RBP22.24■■□□□ 1.15
XRCC3-209ENST00000554913 HNRNPMP52272 730 aaKnown RBP eCLIP22.24■■□□□ 1.155e-6■■■■□ 20.3
XRCC3-209ENST00000554913 IPO9Q96P70 1041 aaKnown RBP22.23■■□□□ 1.15
XRCC3-209ENST00000554913 RRP1P56182 461 aaKnown RBP22.22■■□□□ 1.15
XRCC3-209ENST00000554913 ABCA8O94911 1581 aa22.22■■□□□ 1.15
XRCC3-209ENST00000554913 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
XRCC3-209ENST00000554913 KTN1Q86UP2 1357 aaKnown RBP22.22■■□□□ 1.15
XRCC3-209ENST00000554913 EXOC6Q8TAG9 804 aa22.21■■□□□ 1.15
XRCC3-209ENST00000554913 ATP10BO94823 1461 aa22.2■■□□□ 1.14
XRCC3-209ENST00000554913 PTPRGP23470 1445 aa22.2■■□□□ 1.14
XRCC3-209ENST00000554913 RCAN3Q9UKA8 241 aa22.18■■□□□ 1.14
XRCC3-209ENST00000554913 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
XRCC3-209ENST00000554913 E9PCH4 1651 aa22.17■■□□□ 1.14
XRCC3-209ENST00000554913 NLRP13Q86W25 1043 aa22.17■■□□□ 1.14
XRCC3-209ENST00000554913 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-209ENST00000554913 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
XRCC3-209ENST00000554913 PARD3Q8TEW0 1356 aa22.14■■□□□ 1.14
XRCC3-209ENST00000554913 RGL3Q3MIN7 710 aa22.14■■□□□ 1.13
XRCC3-209ENST00000554913 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
XRCC3-209ENST00000554913 PER1O15534 1290 aaPredicted RBP22.13■■□□□ 1.13
XRCC3-209ENST00000554913 CDCA7LQ96GN5 454 aa22.12■■□□□ 1.13
XRCC3-209ENST00000554913 PRAG1Q86YV5 1406 aa22.12■■□□□ 1.13
XRCC3-209ENST00000554913 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
XRCC3-209ENST00000554913 PDE3BQ13370 1112 aa22.09■■□□□ 1.13
XRCC3-209ENST00000554913 CCDC144AA2RUR9 1427 aa22.08■■□□□ 1.13
XRCC3-209ENST00000554913 ARHGEF5Q12774 1597 aa22.08■■□□□ 1.13
XRCC3-209ENST00000554913 NPM2Q86SE8 214 aaKnown RBP22.08■■□□□ 1.13
XRCC3-209ENST00000554913 CC2D1BQ5T0F9 858 aaKnown RBP22.08■■□□□ 1.12
XRCC3-209ENST00000554913 TRPM1Q7Z4N2 1603 aa22.08■■□□□ 1.12
XRCC3-209ENST00000554913 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
XRCC3-209ENST00000554913 CCDC141Q6ZP82 1450 aa22.05■■□□□ 1.12
XRCC3-209ENST00000554913 PDE4AP27815 886 aa22.04■■□□□ 1.12
XRCC3-209ENST00000554913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.12
XRCC3-209ENST00000554913 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
XRCC3-209ENST00000554913 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
XRCC3-209ENST00000554913 PLIN1O60240 522 aa22.04■■□□□ 1.12
XRCC3-209ENST00000554913 TESK2Q96S53 571 aa22.04■■□□□ 1.12
XRCC3-209ENST00000554913 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
XRCC3-209ENST00000554913 PANK3Q9H999 370 aa22.02■■□□□ 1.12
XRCC3-209ENST00000554913 GPRASP1Q5JY77 1395 aa22.02■■□□□ 1.12
XRCC3-209ENST00000554913 A2MP01023 1474 aa22.02■■□□□ 1.11
XRCC3-209ENST00000554913 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
XRCC3-209ENST00000554913 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
XRCC3-209ENST00000554913 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
XRCC3-209ENST00000554913 BACH2Q9BYV9 841 aa22■■□□□ 1.11
XRCC3-209ENST00000554913 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
XRCC3-209ENST00000554913 RSPH4AQ5TD94 716 aa21.98■■□□□ 1.11
XRCC3-209ENST00000554913 WASHC2CQ9Y4E1 1318 aa21.98■■□□□ 1.11
XRCC3-209ENST00000554913 SKAP1Q86WV1 359 aa21.97■■□□□ 1.11
XRCC3-209ENST00000554913 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
XRCC3-209ENST00000554913 MS4A1P11836 297 aa21.96■■□□□ 1.11
XRCC3-209ENST00000554913 ERBINQ96RT1 1412 aa21.96■■□□□ 1.11
XRCC3-209ENST00000554913 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
XRCC3-209ENST00000554913 PRDM15P57071 1507 aaPredicted RBP21.95■■□□□ 1.1
XRCC3-209ENST00000554913 PREX2Q70Z35 1606 aa21.94■■□□□ 1.1
XRCC3-209ENST00000554913 SYCP2Q9BX26 1530 aa21.94■■□□□ 1.1
XRCC3-209ENST00000554913 TMF1P82094 1093 aa21.93■■□□□ 1.1
XRCC3-209ENST00000554913 UNC13BO14795 1591 aa21.91■■□□□ 1.1
XRCC3-209ENST00000554913 LAS1LQ9Y4W2 734 aaKnown RBP21.91■■□□□ 1.1
XRCC3-209ENST00000554913 INSRP06213 1382 aa21.91■■□□□ 1.1
XRCC3-209ENST00000554913 PLEKHH2Q8IVE3 1493 aa21.91■■□□□ 1.1
XRCC3-209ENST00000554913 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
XRCC3-209ENST00000554913 ADAMTS8Q9UP79 889 aa21.9■■□□□ 1.1
XRCC3-209ENST00000554913 LAMC1P11047 1609 aa21.9■■□□□ 1.1
XRCC3-209ENST00000554913 C20orf194Q5TEA3 1177 aa21.89■■□□□ 1.1
XRCC3-209ENST00000554913 ARHGAP5Q13017 1502 aa21.88■■□□□ 1.09
XRCC3-209ENST00000554913 ZMYM4Q5VZL5 1548 aa21.87■■□□□ 1.09
XRCC3-209ENST00000554913 MYO5CQ9NQX4 1742 aa21.87■■□□□ 1.09
XRCC3-209ENST00000554913 MAST1Q9Y2H9 1570 aa21.85■■□□□ 1.09
XRCC3-209ENST00000554913 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
XRCC3-209ENST00000554913 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
XRCC3-209ENST00000554913 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
XRCC3-209ENST00000554913 NEFMP07197 916 aa21.83■■□□□ 1.09
XRCC3-209ENST00000554913 MAGI2Q86UL8 1455 aa21.82■■□□□ 1.08
XRCC3-209ENST00000554913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.82■■□□□ 1.082e-6■■■■■ 51.7
XRCC3-209ENST00000554913 PLEKHH1Q9ULM0 1364 aa21.81■■□□□ 1.08
XRCC3-209ENST00000554913 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
XRCC3-209ENST00000554913 KNSTRNQ9Y448 316 aa21.8■■□□□ 1.08
XRCC3-209ENST00000554913 ATP10AO60312 1499 aa21.8■■□□□ 1.08
XRCC3-209ENST00000554913 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
XRCC3-209ENST00000554913 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
XRCC3-209ENST00000554913 ZCCHC11Q5TAX3 1644 aaKnown RBP21.79■■□□□ 1.08
XRCC3-209ENST00000554913 WDR43Q15061 677 aaKnown RBP eCLIP21.78■■□□□ 1.08
XRCC3-209ENST00000554913 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
XRCC3-209ENST00000554913 KDM2BQ8NHM5 1336 aa21.78■■□□□ 1.08
XRCC3-209ENST00000554913 AMER1Q5JTC6 1135 aaPredicted RBP21.77■■□□□ 1.08
XRCC3-209ENST00000554913 DUOX2Q9NRD8 1548 aa21.76■■□□□ 1.07
XRCC3-209ENST00000554913 RNF17Q9BXT8 1623 aaKnown RBP21.75■■□□□ 1.07
XRCC3-209ENST00000554913 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
XRCC3-209ENST00000554913 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
XRCC3-209ENST00000554913 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
XRCC3-209ENST00000554913 PPM1GO15355 546 aaPredicted RBP21.74■■□□□ 1.07
XRCC3-209ENST00000554913 GOLGA2Q08379 1002 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms