RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 PTPREP23469 700 aa10.42□□□□□ -0.74
PCNX1-208ENST00000554707 PRIM1P49642 420 aaKnown RBP10.42□□□□□ -0.74
PCNX1-208ENST00000554707 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
PCNX1-208ENST00000554707 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
PCNX1-208ENST00000554707 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
PCNX1-208ENST00000554707 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
PCNX1-208ENST00000554707 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
PCNX1-208ENST00000554707 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
PCNX1-208ENST00000554707 NUTM2FA1L443 756 aa10.39□□□□□ -0.75
PCNX1-208ENST00000554707 FCHSD2O94868 740 aa10.38□□□□□ -0.75
PCNX1-208ENST00000554707 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
PCNX1-208ENST00000554707 PPP1R3GB7ZBB8 358 aa10.37□□□□□ -0.75
PCNX1-208ENST00000554707 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
PCNX1-208ENST00000554707 PTGDRQ13258 359 aa10.36□□□□□ -0.75
PCNX1-208ENST00000554707 NPDC1Q9NQX5 325 aaPredicted RBP10.36□□□□□ -0.75
PCNX1-208ENST00000554707 HIC1Q14526 733 aa10.35□□□□□ -0.75
PCNX1-208ENST00000554707 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
PCNX1-208ENST00000554707 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
PCNX1-208ENST00000554707 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
PCNX1-208ENST00000554707 ONECUT3O60422 494 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-208ENST00000554707 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
PCNX1-208ENST00000554707 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
PCNX1-208ENST00000554707 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
PCNX1-208ENST00000554707 GPR37O15354 613 aa10.33□□□□□ -0.76
PCNX1-208ENST00000554707 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
PCNX1-208ENST00000554707 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
PCNX1-208ENST00000554707 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
PCNX1-208ENST00000554707 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
PCNX1-208ENST00000554707 GNPATO15228 680 aa10.31□□□□□ -0.76
PCNX1-208ENST00000554707 COL9A1P20849 921 aa10.31□□□□□ -0.76
PCNX1-208ENST00000554707 TK2O00142 265 aa10.3□□□□□ -0.76
PCNX1-208ENST00000554707 ZMYND10O75800 440 aa10.3□□□□□ -0.76
PCNX1-208ENST00000554707 PSEN2P49810 448 aa10.3□□□□□ -0.76
PCNX1-208ENST00000554707 PRSS12P56730 875 aa10.3□□□□□ -0.76
PCNX1-208ENST00000554707 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
PCNX1-208ENST00000554707 AXIN2Q9Y2T1 843 aa10.29□□□□□ -0.76
PCNX1-208ENST00000554707 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
PCNX1-208ENST00000554707 TTC13Q8NBP0 860 aa10.28□□□□□ -0.76
PCNX1-208ENST00000554707 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
PCNX1-208ENST00000554707 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
PCNX1-208ENST00000554707 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
PCNX1-208ENST00000554707 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
PCNX1-208ENST00000554707 MINK1Q8N4C8 1332 aaPredicted RBP10.25□□□□□ -0.77
PCNX1-208ENST00000554707 PACS2Q86VP3 889 aa10.24□□□□□ -0.77
PCNX1-208ENST00000554707 VPS9D1Q9Y2B5 631 aa10.24□□□□□ -0.77
PCNX1-208ENST00000554707 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
PCNX1-208ENST00000554707 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
PCNX1-208ENST00000554707 RABGEF1Q9UJ41 708 aa10.23□□□□□ -0.77
PCNX1-208ENST00000554707 PADI6Q6TGC4 694 aa10.22□□□□□ -0.77
PCNX1-208ENST00000554707 TSKSQ9UJT2 592 aa10.22□□□□□ -0.77
PCNX1-208ENST00000554707 PROX2Q3B8N5 592 aa10.21□□□□□ -0.77
PCNX1-208ENST00000554707 ADGRD1Q6QNK2 874 aa10.21□□□□□ -0.77
PCNX1-208ENST00000554707 IRF6O14896 467 aa10.2□□□□□ -0.78
PCNX1-208ENST00000554707 OATP04181 439 aa10.2□□□□□ -0.78
PCNX1-208ENST00000554707 KRI1Q8N9T8 703 aaKnown RBP10.2□□□□□ -0.78
PCNX1-208ENST00000554707 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
PCNX1-208ENST00000554707 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
PCNX1-208ENST00000554707 FECHP22830 423 aa10.19□□□□□ -0.78
PCNX1-208ENST00000554707 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
PCNX1-208ENST00000554707 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
PCNX1-208ENST00000554707 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
PCNX1-208ENST00000554707 HRO43593 1189 aa10.17□□□□□ -0.78
PCNX1-208ENST00000554707 LAPTM4BQ86VI4 370 aa10.17□□□□□ -0.78
PCNX1-208ENST00000554707 TATDN2Q93075 761 aa10.17□□□□□ -0.78
PCNX1-208ENST00000554707 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
PCNX1-208ENST00000554707 ADGRG1Q9Y653 693 aa10.17□□□□□ -0.78
PCNX1-208ENST00000554707 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
PCNX1-208ENST00000554707 AK7Q96M32 723 aa10.16□□□□□ -0.78
PCNX1-208ENST00000554707 EYA1Q99502 592 aa10.15□□□□□ -0.78
PCNX1-208ENST00000554707 NUDT18Q6ZVK8 323 aa10.14□□□□□ -0.79
PCNX1-208ENST00000554707 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
PCNX1-208ENST00000554707 PXYLP1Q8TE99 480 aa10.13□□□□□ -0.79
PCNX1-208ENST00000554707 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
PCNX1-208ENST00000554707 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
PCNX1-208ENST00000554707 METTL3Q86U44 580 aaKnown RBP10.12□□□□□ -0.79
PCNX1-208ENST00000554707 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
PCNX1-208ENST00000554707 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
PCNX1-208ENST00000554707 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
PCNX1-208ENST00000554707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
PCNX1-208ENST00000554707 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
PCNX1-208ENST00000554707 C3orf80F5H4A9 247 aa10.09□□□□□ -0.79
PCNX1-208ENST00000554707 TRIM66O15016 1216 aa10.08□□□□□ -0.8
PCNX1-208ENST00000554707 DNAJB2P25686 324 aa10.08□□□□□ -0.8
PCNX1-208ENST00000554707 RCCD1A6NED2 376 aa10.07□□□□□ -0.8
PCNX1-208ENST00000554707 SMAPO00193 183 aa10.07□□□□□ -0.8
PCNX1-208ENST00000554707 AMHR2Q16671 573 aa10.07□□□□□ -0.8
PCNX1-208ENST00000554707 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
PCNX1-208ENST00000554707 SEPT9Q9UHD8 586 aaPredicted RBP10.07□□□□□ -0.8
PCNX1-208ENST00000554707 HDGFP51858 240 aaKnown RBP10.06□□□□□ -0.8
PCNX1-208ENST00000554707 GOLGA8CPA6NN73 597 aa10.05□□□□□ -0.8
PCNX1-208ENST00000554707 ZFRQ96KR1 1074 aaKnown RBP10.05□□□□□ -0.8
PCNX1-208ENST00000554707 PHOX2BQ99453 314 aa10.04□□□□□ -0.8
PCNX1-208ENST00000554707 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
PCNX1-208ENST00000554707 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-208ENST00000554707 CLCN1P35523 988 aa10.02□□□□□ -0.81
PCNX1-208ENST00000554707 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
PCNX1-208ENST00000554707 PDE4DQ08499 809 aa10.01□□□□□ -0.81
PCNX1-208ENST00000554707 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
PCNX1-208ENST00000554707 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
PCNX1-208ENST00000554707 GPCPD1Q9NPB8 672 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms