RNA–Protein interactions for RNA: ENST00000554575.2

RAD51B-220, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-220ENST00000554575 ANKK1Q8NFD2 765 aa12.95□□□□□ -0.34
RAD51B-220ENST00000554575 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
RAD51B-220ENST00000554575 RGS20O76081 388 aa12.93□□□□□ -0.34
RAD51B-220ENST00000554575 BCAMP50895 628 aa12.93□□□□□ -0.34
RAD51B-220ENST00000554575 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
RAD51B-220ENST00000554575 DPYSL4O14531 572 aa12.9□□□□□ -0.34
RAD51B-220ENST00000554575 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
RAD51B-220ENST00000554575 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
RAD51B-220ENST00000554575 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
RAD51B-220ENST00000554575 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
RAD51B-220ENST00000554575 LAPTM4BQ86VI4 370 aa12.87□□□□□ -0.35
RAD51B-220ENST00000554575 ZFRQ96KR1 1074 aaKnown RBP12.87□□□□□ -0.35
RAD51B-220ENST00000554575 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
RAD51B-220ENST00000554575 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
RAD51B-220ENST00000554575 EPAS1Q99814 870 aa12.86□□□□□ -0.35
RAD51B-220ENST00000554575 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
RAD51B-220ENST00000554575 DDX12PQ92771 950 aa12.84□□□□□ -0.35
RAD51B-220ENST00000554575 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
RAD51B-220ENST00000554575 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
RAD51B-220ENST00000554575 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
RAD51B-220ENST00000554575 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
RAD51B-220ENST00000554575 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
RAD51B-220ENST00000554575 NBR1Q14596 966 aa12.75□□□□□ -0.37
RAD51B-220ENST00000554575 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
RAD51B-220ENST00000554575 KCNC4Q03721 635 aa12.74□□□□□ -0.37
RAD51B-220ENST00000554575 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
RAD51B-220ENST00000554575 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
RAD51B-220ENST00000554575 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
RAD51B-220ENST00000554575 MAP3K7O43318 606 aa12.72□□□□□ -0.37
RAD51B-220ENST00000554575 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
RAD51B-220ENST00000554575 TSR3Q9UJK0 312 aaKnown RBP12.72□□□□□ -0.37
RAD51B-220ENST00000554575 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
RAD51B-220ENST00000554575 PDIA6Q15084 440 aa12.69□□□□□ -0.38
RAD51B-220ENST00000554575 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
RAD51B-220ENST00000554575 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
RAD51B-220ENST00000554575 SMAPO00193 183 aa12.65□□□□□ -0.38
RAD51B-220ENST00000554575 Q6ZNB5 142 aa12.63□□□□□ -0.39
RAD51B-220ENST00000554575 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
RAD51B-220ENST00000554575 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
RAD51B-220ENST00000554575 PPP4CP60510 307 aa12.62□□□□□ -0.39
RAD51B-220ENST00000554575 FAM198AQ9UFP1 575 aa12.62□□□□□ -0.39
RAD51B-220ENST00000554575 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
RAD51B-220ENST00000554575 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
RAD51B-220ENST00000554575 PRSS12P56730 875 aa12.6□□□□□ -0.39
RAD51B-220ENST00000554575 GRXCR2A6NFK2 248 aa12.59□□□□□ -0.39
RAD51B-220ENST00000554575 C3orf80F5H4A9 247 aa12.59□□□□□ -0.39
RAD51B-220ENST00000554575 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
RAD51B-220ENST00000554575 E2F4Q16254 413 aa12.57□□□□□ -0.4
RAD51B-220ENST00000554575 TJAP1Q5JTD0 557 aa12.55□□□□□ -0.4
RAD51B-220ENST00000554575 TATDN2Q93075 761 aa12.55□□□□□ -0.4
RAD51B-220ENST00000554575 PNMA3Q9UL41 463 aa12.55□□□□□ -0.4
RAD51B-220ENST00000554575 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
RAD51B-220ENST00000554575 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
RAD51B-220ENST00000554575 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
RAD51B-220ENST00000554575 RNF40O75150 1001 aa12.51□□□□□ -0.41
RAD51B-220ENST00000554575 MTRQ99707 1265 aa12.51□□□□□ -0.41
RAD51B-220ENST00000554575 OSBPP22059 807 aa12.5□□□□□ -0.41
RAD51B-220ENST00000554575 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
RAD51B-220ENST00000554575 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
RAD51B-220ENST00000554575 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
RAD51B-220ENST00000554575 ARIH1Q9Y4X5 557 aaPredicted RBP12.49□□□□□ -0.41
RAD51B-220ENST00000554575 GFRA3O60609 400 aa12.48□□□□□ -0.41
RAD51B-220ENST00000554575 IL21Q9HBE4 155 aa12.48□□□□□ -0.41
RAD51B-220ENST00000554575 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
RAD51B-220ENST00000554575 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
RAD51B-220ENST00000554575 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
RAD51B-220ENST00000554575 LAPTM4AQ15012 233 aa12.46□□□□□ -0.41
RAD51B-220ENST00000554575 PPP1R18Q6NYC8 613 aa12.46□□□□□ -0.41
RAD51B-220ENST00000554575 LCE2BO14633 110 aa12.45□□□□□ -0.42
RAD51B-220ENST00000554575 APLP1P51693 650 aa12.45□□□□□ -0.42
RAD51B-220ENST00000554575 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
RAD51B-220ENST00000554575 HDGFP51858 240 aaKnown RBP12.44□□□□□ -0.42
RAD51B-220ENST00000554575 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
RAD51B-220ENST00000554575 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
RAD51B-220ENST00000554575 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
RAD51B-220ENST00000554575 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
RAD51B-220ENST00000554575 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
RAD51B-220ENST00000554575 NPDC1Q9NQX5 325 aaPredicted RBP12.39□□□□□ -0.43
RAD51B-220ENST00000554575 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
RAD51B-220ENST00000554575 COPS2P61201 443 aa12.37□□□□□ -0.43
RAD51B-220ENST00000554575 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
RAD51B-220ENST00000554575 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
RAD51B-220ENST00000554575 NRG2O14511 850 aaPredicted RBP12.35□□□□□ -0.43
RAD51B-220ENST00000554575 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
RAD51B-220ENST00000554575 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
RAD51B-220ENST00000554575 EYA1Q99502 592 aa12.29□□□□□ -0.44
RAD51B-220ENST00000554575 PDZRN3Q9UPQ7 1066 aa12.28□□□□□ -0.44
RAD51B-220ENST00000554575 GGCXP38435 758 aa12.27□□□□□ -0.45
RAD51B-220ENST00000554575 ZPR1O75312 459 aa12.26□□□□□ -0.45
RAD51B-220ENST00000554575 MLLT3P42568 568 aaPredicted RBP12.26□□□□□ -0.45
RAD51B-220ENST00000554575 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
RAD51B-220ENST00000554575 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
RAD51B-220ENST00000554575 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
RAD51B-220ENST00000554575 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
RAD51B-220ENST00000554575 BLOC1S3Q6QNY0 202 aa12.22□□□□□ -0.45
RAD51B-220ENST00000554575 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
RAD51B-220ENST00000554575 PRR14Q9BWN1 585 aa12.2□□□□□ -0.46
RAD51B-220ENST00000554575 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
RAD51B-220ENST00000554575 TLL1O43897 1013 aa12.18□□□□□ -0.46
RAD51B-220ENST00000554575 PTGDRQ13258 359 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms