RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
KTN1-216ENST00000554570 PSEN2P49810 448 aa11.24□□□□□ -0.61
KTN1-216ENST00000554570 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
KTN1-216ENST00000554570 C6orf132Q5T0Z8 1188 aa11.23□□□□□ -0.61
KTN1-216ENST00000554570 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
KTN1-216ENST00000554570 TK2O00142 265 aa11.21□□□□□ -0.61
KTN1-216ENST00000554570 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
KTN1-216ENST00000554570 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
KTN1-216ENST00000554570 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.61
KTN1-216ENST00000554570 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
KTN1-216ENST00000554570 MAP3K7O43318 606 aa11.19□□□□□ -0.62
KTN1-216ENST00000554570 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
KTN1-216ENST00000554570 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
KTN1-216ENST00000554570 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
KTN1-216ENST00000554570 COL9A1P20849 921 aa11.17□□□□□ -0.62
KTN1-216ENST00000554570 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
KTN1-216ENST00000554570 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
KTN1-216ENST00000554570 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
KTN1-216ENST00000554570 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
KTN1-216ENST00000554570 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.62
KTN1-216ENST00000554570 ONECUT3O60422 494 aaPredicted RBP11.13□□□□□ -0.63
KTN1-216ENST00000554570 HRO43593 1189 aa11.12□□□□□ -0.63
KTN1-216ENST00000554570 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
KTN1-216ENST00000554570 CDHR5Q9HBB8 845 aa11.1□□□□□ -0.63
KTN1-216ENST00000554570 BHMG1C9JSJ3 638 aaPredicted RBP11.09□□□□□ -0.63
KTN1-216ENST00000554570 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.64
KTN1-216ENST00000554570 PROX2Q3B8N5 592 aa11.08□□□□□ -0.64
KTN1-216ENST00000554570 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
KTN1-216ENST00000554570 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
KTN1-216ENST00000554570 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
KTN1-216ENST00000554570 PRSS12P56730 875 aa11.07□□□□□ -0.64
KTN1-216ENST00000554570 PTGDRQ13258 359 aa11.07□□□□□ -0.64
KTN1-216ENST00000554570 RBM26Q5T8P6 1007 aaKnown RBP11.07□□□□□ -0.64
KTN1-216ENST00000554570 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
KTN1-216ENST00000554570 MMRN1Q13201 1228 aa11.05□□□□□ -0.64
KTN1-216ENST00000554570 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
KTN1-216ENST00000554570 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
KTN1-216ENST00000554570 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
KTN1-216ENST00000554570 TSKSQ9UJT2 592 aa11.03□□□□□ -0.64
KTN1-216ENST00000554570 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
KTN1-216ENST00000554570 FCHSD2O94868 740 aa11.02□□□□□ -0.65
KTN1-216ENST00000554570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.65
KTN1-216ENST00000554570 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
KTN1-216ENST00000554570 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
KTN1-216ENST00000554570 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
KTN1-216ENST00000554570 HIC1Q14526 733 aa11□□□□□ -0.65
KTN1-216ENST00000554570 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
KTN1-216ENST00000554570 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
KTN1-216ENST00000554570 GPR37O15354 613 aa10.99□□□□□ -0.65
KTN1-216ENST00000554570 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
KTN1-216ENST00000554570 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
KTN1-216ENST00000554570 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
KTN1-216ENST00000554570 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
KTN1-216ENST00000554570 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
KTN1-216ENST00000554570 BCANQ96GW7 911 aa10.96□□□□□ -0.65
KTN1-216ENST00000554570 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
KTN1-216ENST00000554570 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
KTN1-216ENST00000554570 GNPATO15228 680 aa10.94□□□□□ -0.66
KTN1-216ENST00000554570 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
KTN1-216ENST00000554570 TATDN2Q93075 761 aa10.94□□□□□ -0.66
KTN1-216ENST00000554570 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
KTN1-216ENST00000554570 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
KTN1-216ENST00000554570 GOLGA8CPA6NN73 597 aa10.91□□□□□ -0.66
KTN1-216ENST00000554570 NUDT18Q6ZVK8 323 aa10.91□□□□□ -0.66
KTN1-216ENST00000554570 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
KTN1-216ENST00000554570 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
KTN1-216ENST00000554570 EYA1Q99502 592 aa10.9□□□□□ -0.66
KTN1-216ENST00000554570 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
KTN1-216ENST00000554570 SMAPO00193 183 aa10.88□□□□□ -0.67
KTN1-216ENST00000554570 FECHP22830 423 aa10.88□□□□□ -0.67
KTN1-216ENST00000554570 WNT2BQ93097 391 aa10.88□□□□□ -0.67
KTN1-216ENST00000554570 KCTD12Q96CX2 325 aaKnown RBP10.87□□□□□ -0.67
KTN1-216ENST00000554570 ANKK1Q8NFD2 765 aa10.86□□□□□ -0.67
KTN1-216ENST00000554570 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
KTN1-216ENST00000554570 OATP04181 439 aa10.85□□□□□ -0.67
KTN1-216ENST00000554570 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
KTN1-216ENST00000554570 SOWAHBA6NEL2 793 aa10.84□□□□□ -0.67
KTN1-216ENST00000554570 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
KTN1-216ENST00000554570 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
KTN1-216ENST00000554570 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
KTN1-216ENST00000554570 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
KTN1-216ENST00000554570 ZMYND10O75800 440 aa10.81□□□□□ -0.68
KTN1-216ENST00000554570 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
KTN1-216ENST00000554570 METTL3Q86U44 580 aaKnown RBP10.81□□□□□ -0.68
KTN1-216ENST00000554570 LRCH3Q96II8 777 aa10.81□□□□□ -0.68
KTN1-216ENST00000554570 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
KTN1-216ENST00000554570 DNAJB2P25686 324 aa10.8□□□□□ -0.68
KTN1-216ENST00000554570 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
KTN1-216ENST00000554570 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
KTN1-216ENST00000554570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.79□□□□□ -0.68
KTN1-216ENST00000554570 IRF6O14896 467 aa10.79□□□□□ -0.68
KTN1-216ENST00000554570 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
KTN1-216ENST00000554570 SAMD7Q7Z3H4 446 aa10.79□□□□□ -0.68
KTN1-216ENST00000554570 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
KTN1-216ENST00000554570 BCAMP50895 628 aa10.78□□□□□ -0.68
KTN1-216ENST00000554570 TMEM134Q9H6X4 195 aa10.78□□□□□ -0.68
KTN1-216ENST00000554570 PTPN5P54829 565 aa10.76□□□□□ -0.69
KTN1-216ENST00000554570 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
KTN1-216ENST00000554570 TSR3Q9UJK0 312 aaKnown RBP10.76□□□□□ -0.69
KTN1-216ENST00000554570 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms