RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
SLC38A6-219ENST00000554498 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
SLC38A6-219ENST00000554498 DDX27Q96GQ7 796 aaKnown RBP11.59□□□□□ -0.55
SLC38A6-219ENST00000554498 DNAJC5Q9H3Z4 198 aa11.58□□□□□ -0.56
SLC38A6-219ENST00000554498 COL9A1P20849 921 aa11.57□□□□□ -0.56
SLC38A6-219ENST00000554498 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
SLC38A6-219ENST00000554498 ZFRQ96KR1 1074 aaKnown RBP11.57□□□□□ -0.56
SLC38A6-219ENST00000554498 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
SLC38A6-219ENST00000554498 TYW1BQ6NUM6 668 aa11.56□□□□□ -0.56
SLC38A6-219ENST00000554498 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
SLC38A6-219ENST00000554498 WBP1LQ9NX94 342 aa11.55□□□□□ -0.56
SLC38A6-219ENST00000554498 KIAA1468Q9P260 1216 aa11.54□□□□□ -0.56
SLC38A6-219ENST00000554498 PHF14O94880 888 aa11.52□□□□□ -0.57
SLC38A6-219ENST00000554498 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
SLC38A6-219ENST00000554498 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
SLC38A6-219ENST00000554498 MFSD10Q14728 455 aa11.49□□□□□ -0.57
SLC38A6-219ENST00000554498 TSR3Q9UJK0 312 aaKnown RBP11.49□□□□□ -0.57
SLC38A6-219ENST00000554498 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
SLC38A6-219ENST00000554498 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
SLC38A6-219ENST00000554498 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.48□□□□□ -0.57
SLC38A6-219ENST00000554498 GFRA3O60609 400 aa11.47□□□□□ -0.57
SLC38A6-219ENST00000554498 FAM98CQ17RN3 349 aaKnown RBP11.47□□□□□ -0.57
SLC38A6-219ENST00000554498 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
SLC38A6-219ENST00000554498 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
SLC38A6-219ENST00000554498 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
SLC38A6-219ENST00000554498 EPAS1Q99814 870 aa11.44□□□□□ -0.58
SLC38A6-219ENST00000554498 C6orf132Q5T0Z8 1188 aa11.43□□□□□ -0.58
SLC38A6-219ENST00000554498 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
SLC38A6-219ENST00000554498 LCE2BO14633 110 aa11.41□□□□□ -0.58
SLC38A6-219ENST00000554498 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
SLC38A6-219ENST00000554498 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
SLC38A6-219ENST00000554498 PPP4CP60510 307 aa11.37□□□□□ -0.59
SLC38A6-219ENST00000554498 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
SLC38A6-219ENST00000554498 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
SLC38A6-219ENST00000554498 PACS2Q86VP3 889 aa11.34□□□□□ -0.59
SLC38A6-219ENST00000554498 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
SLC38A6-219ENST00000554498 DPYSL4O14531 572 aa11.3□□□□□ -0.6
SLC38A6-219ENST00000554498 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
SLC38A6-219ENST00000554498 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
SLC38A6-219ENST00000554498 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
SLC38A6-219ENST00000554498 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
SLC38A6-219ENST00000554498 DDX12PQ92771 950 aa11.28□□□□□ -0.6
SLC38A6-219ENST00000554498 MTRQ99707 1265 aa11.28□□□□□ -0.6
SLC38A6-219ENST00000554498 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
SLC38A6-219ENST00000554498 MAP3K7O43318 606 aa11.26□□□□□ -0.61
SLC38A6-219ENST00000554498 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
SLC38A6-219ENST00000554498 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
SLC38A6-219ENST00000554498 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
SLC38A6-219ENST00000554498 CAMK2BQ13554 666 aa11.25□□□□□ -0.61
SLC38A6-219ENST00000554498 NBR1Q14596 966 aa11.25□□□□□ -0.61
SLC38A6-219ENST00000554498 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
SLC38A6-219ENST00000554498 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
SLC38A6-219ENST00000554498 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
SLC38A6-219ENST00000554498 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
SLC38A6-219ENST00000554498 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
SLC38A6-219ENST00000554498 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
SLC38A6-219ENST00000554498 SMAPO00193 183 aa11.21□□□□□ -0.61
SLC38A6-219ENST00000554498 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
SLC38A6-219ENST00000554498 RNF40O75150 1001 aa11.2□□□□□ -0.62
SLC38A6-219ENST00000554498 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
SLC38A6-219ENST00000554498 GGCXP38435 758 aa11.19□□□□□ -0.62
SLC38A6-219ENST00000554498 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
SLC38A6-219ENST00000554498 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
SLC38A6-219ENST00000554498 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
SLC38A6-219ENST00000554498 PRSS12P56730 875 aa11.16□□□□□ -0.62
SLC38A6-219ENST00000554498 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
SLC38A6-219ENST00000554498 ZNF775Q96BV0 537 aaPredicted RBP11.16□□□□□ -0.62
SLC38A6-219ENST00000554498 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
SLC38A6-219ENST00000554498 NECTIN2Q92692 538 aa11.14□□□□□ -0.63
SLC38A6-219ENST00000554498 TATDN2Q93075 761 aa11.14□□□□□ -0.63
SLC38A6-219ENST00000554498 PDIA6Q15084 440 aa11.13□□□□□ -0.63
SLC38A6-219ENST00000554498 APLP1P51693 650 aa11.12□□□□□ -0.63
SLC38A6-219ENST00000554498 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
SLC38A6-219ENST00000554498 NKX2-3Q8TAU0 364 aa11.1□□□□□ -0.63
SLC38A6-219ENST00000554498 COPS2P61201 443 aa11.09□□□□□ -0.63
SLC38A6-219ENST00000554498 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
SLC38A6-219ENST00000554498 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
SLC38A6-219ENST00000554498 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
SLC38A6-219ENST00000554498 NUDT18Q6ZVK8 323 aa11.07□□□□□ -0.64
SLC38A6-219ENST00000554498 PKDCCQ504Y2 493 aa11.05□□□□□ -0.64
SLC38A6-219ENST00000554498 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
SLC38A6-219ENST00000554498 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
SLC38A6-219ENST00000554498 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
SLC38A6-219ENST00000554498 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
SLC38A6-219ENST00000554498 ZPR1O75312 459 aa11.01□□□□□ -0.65
SLC38A6-219ENST00000554498 SWT1Q5T5J6 900 aaKnown RBP11.01□□□□□ -0.65
SLC38A6-219ENST00000554498 SLC19A1P41440 591 aa11□□□□□ -0.65
SLC38A6-219ENST00000554498 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
SLC38A6-219ENST00000554498 DGAT1O75907 488 aa10.99□□□□□ -0.65
SLC38A6-219ENST00000554498 PRIM1P49642 420 aaKnown RBP10.99□□□□□ -0.65
SLC38A6-219ENST00000554498 PRR14Q9BWN1 585 aa10.99□□□□□ -0.65
SLC38A6-219ENST00000554498 CDHR5Q9HBB8 845 aa10.99□□□□□ -0.65
SLC38A6-219ENST00000554498 MYT1Q01538 1121 aa10.98□□□□□ -0.65
SLC38A6-219ENST00000554498 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
SLC38A6-219ENST00000554498 PCDHB3Q9Y5E6 796 aa10.97□□□□□ -0.65
SLC38A6-219ENST00000554498 RNF223E7ERA6 249 aa10.96□□□□□ -0.65
SLC38A6-219ENST00000554498 PLCB2Q00722 1185 aa10.95□□□□□ -0.66
SLC38A6-219ENST00000554498 PRR20EP86478 221 aa10.94□□□□□ -0.66
SLC38A6-219ENST00000554498 PRR20CP86479 221 aa10.94□□□□□ -0.66
SLC38A6-219ENST00000554498 PRR20DP86480 221 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms