RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.2
TUBB3-206ENST00000554444 MYT1LQ9UL68 1186 aa22.58■■□□□ 1.2
TUBB3-206ENST00000554444 KIDINS220Q9ULH0 1771 aa22.57■■□□□ 1.2
TUBB3-206ENST00000554444 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
TUBB3-206ENST00000554444 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
TUBB3-206ENST00000554444 RAPGEF3O95398 923 aa22.54■■□□□ 1.2
TUBB3-206ENST00000554444 KIF3BO15066 747 aa22.52■■□□□ 1.2
TUBB3-206ENST00000554444 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
TUBB3-206ENST00000554444 DEPDC5O75140 1603 aa22.52■■□□□ 1.19
TUBB3-206ENST00000554444 ATP10AO60312 1499 aa22.51■■□□□ 1.19
TUBB3-206ENST00000554444 A2MP01023 1474 aa22.49■■□□□ 1.19
TUBB3-206ENST00000554444 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
TUBB3-206ENST00000554444 VWDEQ8N2E2 1590 aa22.48■■□□□ 1.19
TUBB3-206ENST00000554444 HECW2Q9P2P5 1572 aa22.47■■□□□ 1.19
TUBB3-206ENST00000554444 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
TUBB3-206ENST00000554444 KANK1Q14678 1352 aa22.45■■□□□ 1.19
TUBB3-206ENST00000554444 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
TUBB3-206ENST00000554444 PRDM15P57071 1507 aaPredicted RBP22.43■■□□□ 1.18
TUBB3-206ENST00000554444 FRMPD1Q5SYB0 1578 aa22.43■■□□□ 1.18
TUBB3-206ENST00000554444 MROH1Q8NDA8 1641 aa22.43■■□□□ 1.18
TUBB3-206ENST00000554444 UHRF1BP1Q6BDS2 1440 aa22.42■■□□□ 1.18
TUBB3-206ENST00000554444 RICTORQ6R327 1708 aa22.42■■□□□ 1.18
TUBB3-206ENST00000554444 PTPRTO14522 1441 aa22.41■■□□□ 1.18
TUBB3-206ENST00000554444 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.18
TUBB3-206ENST00000554444 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
TUBB3-206ENST00000554444 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
TUBB3-206ENST00000554444 ABCA6Q8N139 1617 aa22.39■■□□□ 1.17
TUBB3-206ENST00000554444 HSPA5P11021 654 aaKnown RBP22.38■■□□□ 1.17
TUBB3-206ENST00000554444 E9PCH4 1651 aa22.38■■□□□ 1.17
TUBB3-206ENST00000554444 TET3O43151 1660 aa22.37■■□□□ 1.17
TUBB3-206ENST00000554444 DCAF11Q8TEB1 546 aa22.37■■□□□ 1.17
TUBB3-206ENST00000554444 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
TUBB3-206ENST00000554444 LMTK2Q8IWU2 1503 aa22.36■■□□□ 1.17
TUBB3-206ENST00000554444 DIP2CQ9Y2E4 1556 aa22.35■■□□□ 1.17
TUBB3-206ENST00000554444 BCORL1Q5H9F3 1711 aa22.35■■□□□ 1.17
TUBB3-206ENST00000554444 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
TUBB3-206ENST00000554444 SPATA31E1Q6ZUB1 1445 aa22.34■■□□□ 1.17
TUBB3-206ENST00000554444 ZMYM4Q5VZL5 1548 aa22.33■■□□□ 1.17
TUBB3-206ENST00000554444 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
TUBB3-206ENST00000554444 GGT6Q6P531 493 aa22.32■■□□□ 1.16
TUBB3-206ENST00000554444 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
TUBB3-206ENST00000554444 TRPM2O94759 1503 aa22.32■■□□□ 1.16
TUBB3-206ENST00000554444 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
TUBB3-206ENST00000554444 ZNF326Q5BKZ1 582 aaKnown RBP22.3■■□□□ 1.16
TUBB3-206ENST00000554444 KIF13AQ9H1H9 1805 aa22.3■■□□□ 1.16
TUBB3-206ENST00000554444 TSPOAP1O95153 1857 aa22.3■■□□□ 1.16
TUBB3-206ENST00000554444 EFCAB6Q5THR3 1501 aa22.29■■□□□ 1.16
TUBB3-206ENST00000554444 RALGAPBQ86X10 1494 aa22.28■■□□□ 1.16
TUBB3-206ENST00000554444 WASHC2CQ9Y4E1 1318 aa22.26■■□□□ 1.15
TUBB3-206ENST00000554444 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
TUBB3-206ENST00000554444 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
TUBB3-206ENST00000554444 PRAG1Q86YV5 1406 aa22.26■■□□□ 1.15
TUBB3-206ENST00000554444 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
TUBB3-206ENST00000554444 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
TUBB3-206ENST00000554444 STAC3Q96MF2 364 aa22.23■■□□□ 1.15
TUBB3-206ENST00000554444 ABCC3O15438 1527 aa22.23■■□□□ 1.15
TUBB3-206ENST00000554444 NPATQ14207 1427 aa22.22■■□□□ 1.15
TUBB3-206ENST00000554444 C11orf95C9JLR9 678 aaPredicted RBP22.22■■□□□ 1.15
TUBB3-206ENST00000554444 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
TUBB3-206ENST00000554444 USP47Q96K76 1375 aa22.2■■□□□ 1.14
TUBB3-206ENST00000554444 CARD11Q9BXL7 1154 aa22.2■■□□□ 1.14
TUBB3-206ENST00000554444 CEP152O94986 1710 aa22.2■■□□□ 1.14
TUBB3-206ENST00000554444 NEURL4Q96JN8 1562 aa22.2■■□□□ 1.14
TUBB3-206ENST00000554444 REREQ9P2R6 1566 aa22.18■■□□□ 1.14
TUBB3-206ENST00000554444 ARHGAP31Q2M1Z3 1444 aa22.17■■□□□ 1.14
TUBB3-206ENST00000554444 GPRASP1Q5JY77 1395 aa22.16■■□□□ 1.14
TUBB3-206ENST00000554444 ROCK2O75116 1388 aaKnown RBP22.15■■□□□ 1.14
TUBB3-206ENST00000554444 AGLP35573 1532 aa22.15■■□□□ 1.14
TUBB3-206ENST00000554444 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
TUBB3-206ENST00000554444 CNTLNQ9NXG0 1405 aa22.15■■□□□ 1.14
TUBB3-206ENST00000554444 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
TUBB3-206ENST00000554444 UGGT1Q9NYU2 1555 aa22.14■■□□□ 1.13
TUBB3-206ENST00000554444 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
TUBB3-206ENST00000554444 GTF3C3Q9Y5Q9 886 aa22.14■■□□□ 1.13
TUBB3-206ENST00000554444 TRPM1Q7Z4N2 1603 aa22.14■■□□□ 1.13
TUBB3-206ENST00000554444 NOS1P29475 1434 aa22.13■■□□□ 1.13
TUBB3-206ENST00000554444 KIF7Q2M1P5 1343 aa22.11■■□□□ 1.13
TUBB3-206ENST00000554444 CAMSAP1Q5T5Y3 1602 aa22.1■■□□□ 1.13
TUBB3-206ENST00000554444 ZC3H13Q5T200 1668 aaKnown RBP22.09■■□□□ 1.13
TUBB3-206ENST00000554444 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
TUBB3-206ENST00000554444 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
TUBB3-206ENST00000554444 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.12
TUBB3-206ENST00000554444 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
TUBB3-206ENST00000554444 ARHGEF40Q8TER5 1519 aa22.05■■□□□ 1.12
TUBB3-206ENST00000554444 LAMC1P11047 1609 aa22.04■■□□□ 1.12
TUBB3-206ENST00000554444 MADDQ8WXG6 1647 aa22.04■■□□□ 1.12
TUBB3-206ENST00000554444 SIGLEC1Q9BZZ2 1709 aa22.04■■□□□ 1.12
TUBB3-206ENST00000554444 ANP32CO43423 234 aa22.04■■□□□ 1.12
TUBB3-206ENST00000554444 ADGRB3O60242 1522 aa22.04■■□□□ 1.12
TUBB3-206ENST00000554444 KIF1BO60333 1816 aa22.03■■□□□ 1.12
TUBB3-206ENST00000554444 SLC52A1Q9NWF4 448 aa22.03■■□□□ 1.12
TUBB3-206ENST00000554444 MYOM2P54296 1465 aa22.03■■□□□ 1.12
TUBB3-206ENST00000554444 SYNMO15061 1565 aa22.01■■□□□ 1.11
TUBB3-206ENST00000554444 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
TUBB3-206ENST00000554444 IDI1Q13907 227 aa22.01■■□□□ 1.11
TUBB3-206ENST00000554444 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
TUBB3-206ENST00000554444 ADGRF5Q8IZF2 1346 aa22■■□□□ 1.11
TUBB3-206ENST00000554444 PIK3C2BO00750 1634 aa22■■□□□ 1.11
TUBB3-206ENST00000554444 NRXN1Q9ULB1 1477 aa21.99■■□□□ 1.11
TUBB3-206ENST00000554444 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms